RNA–Protein interactions for RNA: ENST00000472564.1

LAMP1-203, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 2

Gene LAMP1, Length 5,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-203ENST00000472564 CWC22Q9HCG8 908 aaKnown RBP20.7■□□□□ 0.9
LAMP1-203ENST00000472564 CCDC173Q0VFZ6 552 aa20.7■□□□□ 0.9
LAMP1-203ENST00000472564 HOOK1Q9UJC3 728 aaKnown RBP20.7■□□□□ 0.9
LAMP1-203ENST00000472564 GPS2Q13227 327 aa20.69■□□□□ 0.9
LAMP1-203ENST00000472564 CDK19Q9BWU1 502 aa20.69■□□□□ 0.9
LAMP1-203ENST00000472564 RALYLQ86SE5 291 aaKnown RBP20.69■□□□□ 0.9
LAMP1-203ENST00000472564 NFXL1Q6ZNB6 911 aa20.69■□□□□ 0.9
LAMP1-203ENST00000472564 SDF4Q9BRK5 362 aa20.69■□□□□ 0.9
LAMP1-203ENST00000472564 CDK13Q14004 1512 aaKnown RBP20.68■□□□□ 0.9
LAMP1-203ENST00000472564 PDCP20941 246 aa20.68■□□□□ 0.9
LAMP1-203ENST00000472564 TSPY26PQ9H489 355 aa20.68■□□□□ 0.9
LAMP1-203ENST00000472564 GRPEL1Q9HAV7 217 aa20.68■□□□□ 0.9
LAMP1-203ENST00000472564 G3V3G9 751 aa20.67■□□□□ 0.9
LAMP1-203ENST00000472564 FIBPO43427 364 aa20.67■□□□□ 0.9
LAMP1-203ENST00000472564 DCAF8Q5TAQ9 597 aa20.67■□□□□ 0.9
LAMP1-203ENST00000472564 IPO7O95373 1038 aaKnown RBP20.67■□□□□ 0.9
LAMP1-203ENST00000472564 LETM1O95202 739 aaPredicted RBP20.67■□□□□ 0.9
LAMP1-203ENST00000472564 ANKRD20A12PQ8NF67 263 aa20.67■□□□□ 0.9
LAMP1-203ENST00000472564 CIZ1Q9ULV3 898 aaPredicted RBP20.67■□□□□ 0.9
LAMP1-203ENST00000472564 WASHC4Q2M389 1173 aa20.66■□□□□ 0.9
LAMP1-203ENST00000472564 TPM2P07951 284 aa20.66■□□□□ 0.9
LAMP1-203ENST00000472564 ZNF428Q96B54 188 aa20.66■□□□□ 0.9
LAMP1-203ENST00000472564 NLRP2Q9NX02 1062 aa20.66■□□□□ 0.9
LAMP1-203ENST00000472564 CCT4P50991 539 aaKnown RBP20.66■□□□□ 0.9
LAMP1-203ENST00000472564 TXNDC2Q86VQ3 553 aa20.66■□□□□ 0.9
LAMP1-203ENST00000472564 NCOA1Q15788 1441 aa20.65■□□□□ 0.9
LAMP1-203ENST00000472564 TMPOP42166 694 aaKnown RBP20.65■□□□□ 0.9
LAMP1-203ENST00000472564 TRIM5Q9C035 493 aa20.65■□□□□ 0.9
LAMP1-203ENST00000472564 SLC52A1Q9NWF4 448 aa20.65■□□□□ 0.9
LAMP1-203ENST00000472564 HMGXB3Q12766 1538 aa20.65■□□□□ 0.9
LAMP1-203ENST00000472564 SAFBQ15424 915 aaKnown RBP eCLIP20.65■□□□□ 0.9
LAMP1-203ENST00000472564 HDGFL1Q5TGJ6 251 aa20.65■□□□□ 0.9
LAMP1-203ENST00000472564 VPS53Q5VIR6 699 aa20.64■□□□□ 0.9
LAMP1-203ENST00000472564 TMEM57Q8N5G2 664 aa20.64■□□□□ 0.89
LAMP1-203ENST00000472564 MAP7D2Q96T17 732 aa20.64■□□□□ 0.89
LAMP1-203ENST00000472564 LRRCC1Q9C099 1032 aa20.64■□□□□ 0.89
LAMP1-203ENST00000472564 FCHSD2O94868 740 aa20.64■□□□□ 0.89
LAMP1-203ENST00000472564 ABTB2Q8N961 1025 aa20.64■□□□□ 0.89
LAMP1-203ENST00000472564 PCF11O94913 1555 aaKnown RBP20.63■□□□□ 0.89
LAMP1-203ENST00000472564 MAP3K1Q13233 1512 aa20.63■□□□□ 0.89
LAMP1-203ENST00000472564 NAT10Q9H0A0 1025 aaKnown RBP20.63■□□□□ 0.89
LAMP1-203ENST00000472564 MTERF4Q7Z6M4 381 aaKnown RBP20.63■□□□□ 0.89
LAMP1-203ENST00000472564 PDE4CQ08493 712 aa20.62■□□□□ 0.89
LAMP1-203ENST00000472564 ERICH2A1L162 156 aa20.62■□□□□ 0.89
LAMP1-203ENST00000472564 RARSP54136 660 aaKnown RBP20.62■□□□□ 0.89
LAMP1-203ENST00000472564 CCDC70Q6NSX1 233 aa20.62■□□□□ 0.89
LAMP1-203ENST00000472564 ZNF692Q9BU19 519 aaPredicted RBP20.62■□□□□ 0.89
LAMP1-203ENST00000472564 CEP89Q96ST8 783 aa20.62■□□□□ 0.89
LAMP1-203ENST00000472564 ANO8Q9HCE9 1232 aaPredicted RBP20.62■□□□□ 0.89
LAMP1-203ENST00000472564 NSD3Q9BZ95 1437 aa20.62■□□□□ 0.89
LAMP1-203ENST00000472564 ABCC5O15440 1437 aa20.61■□□□□ 0.89
LAMP1-203ENST00000472564 HIP1O00291 1037 aa20.61■□□□□ 0.89
LAMP1-203ENST00000472564 MNS1Q8NEH6 495 aa20.61■□□□□ 0.89
LAMP1-203ENST00000472564 PCMTD1Q96MG8 357 aaPredicted RBP20.61■□□□□ 0.89
LAMP1-203ENST00000472564 IFT140Q96RY7 1462 aa20.61■□□□□ 0.89
LAMP1-203ENST00000472564 CCDC47Q96A33 483 aaKnown RBP20.6■□□□□ 0.89
LAMP1-203ENST00000472564 SYTL4Q96C24 671 aaPredicted RBP20.6■□□□□ 0.89
LAMP1-203ENST00000472564 KINO60870 393 aaKnown RBP20.6■□□□□ 0.89
LAMP1-203ENST00000472564 VPS37DQ86XT2 251 aa20.6■□□□□ 0.89
LAMP1-203ENST00000472564 RPGRIP1LQ68CZ1 1315 aa20.6■□□□□ 0.89
LAMP1-203ENST00000472564 WDR33Q9C0J8 1336 aaKnown RBP20.6■□□□□ 0.89
LAMP1-203ENST00000472564 ERC1Q8IUD2 1116 aa20.6■□□□□ 0.89
LAMP1-203ENST00000472564 RPAP2Q8IXW5 612 aaPredicted RBP20.59■□□□□ 0.89
LAMP1-203ENST00000472564 ATAD2Q6PL18 1390 aa20.59■□□□□ 0.89
LAMP1-203ENST00000472564 SRCIN1Q9C0H9 1055 aa20.59■□□□□ 0.89
LAMP1-203ENST00000472564 PLEKHO1Q53GL0 409 aaPredicted RBP20.59■□□□□ 0.89
LAMP1-203ENST00000472564 TEX35Q5T0J7 233 aa20.59■□□□□ 0.89
LAMP1-203ENST00000472564 DNAJC2Q99543 621 aaKnown RBP20.58■□□□□ 0.89
LAMP1-203ENST00000472564 ESPNB1AK53 854 aa20.58■□□□□ 0.89
LAMP1-203ENST00000472564 AMOTL1Q8IY63 956 aa20.58■□□□□ 0.89
LAMP1-203ENST00000472564 CYP46A1Q9Y6A2 500 aa20.58■□□□□ 0.89
LAMP1-203ENST00000472564 HMGN5P82970 282 aaKnown RBP20.58■□□□□ 0.88
LAMP1-203ENST00000472564 SSH1Q8WYL5 1049 aa20.58■□□□□ 0.88
LAMP1-203ENST00000472564 NFE2L2Q16236 605 aa20.58■□□□□ 0.88
LAMP1-203ENST00000472564 ARGLU1Q9NWB6 273 aaPredicted RBP20.58■□□□□ 0.88
LAMP1-203ENST00000472564 MRC2Q9UBG0 1479 aa20.57■□□□□ 0.88
LAMP1-203ENST00000472564 BCL11BQ9C0K0 894 aaPredicted RBP20.57■□□□□ 0.88
LAMP1-203ENST00000472564 KIAA0586Q9BVV6 1533 aa20.57■□□□□ 0.88
LAMP1-203ENST00000472564 DUSP27Q5VZP5 1158 aa20.57■□□□□ 0.88
LAMP1-203ENST00000472564 NOL10Q9BSC4 688 aaKnown RBP20.57■□□□□ 0.88
LAMP1-203ENST00000472564 NCBP3Q53F19 620 aaKnown RBP20.56■□□□□ 0.88
LAMP1-203ENST00000472564 ABCA10Q8WWZ4 1543 aa20.56■□□□□ 0.88
LAMP1-203ENST00000472564 RRS1Q15050 365 aaKnown RBP20.56■□□□□ 0.88
LAMP1-203ENST00000472564 SNAPC4Q5SXM2 1469 aa20.56■□□□□ 0.88
LAMP1-203ENST00000472564 DNMBPQ6XZF7 1577 aa20.56■□□□□ 0.88
LAMP1-203ENST00000472564 RPRD2Q5VT52 1461 aaKnown RBP20.55■□□□□ 0.88
LAMP1-203ENST00000472564 OLFM4Q6UX06 510 aa20.55■□□□□ 0.88
LAMP1-203ENST00000472564 NKTRP30414 1462 aaKnown RBP20.54■□□□□ 0.88
LAMP1-203ENST00000472564 FMNL2Q96PY5 1086 aa20.54■□□□□ 0.88
LAMP1-203ENST00000472564 THUMPD2Q9BTF0 503 aaKnown RBP20.54■□□□□ 0.88
LAMP1-203ENST00000472564 RTEL1-TNFRSF6BF6WH68 1400 aa20.54■□□□□ 0.88
LAMP1-203ENST00000472564 PTPN23Q9H3S7 1636 aa20.54■□□□□ 0.88
LAMP1-203ENST00000472564 MPNDQ8N594 471 aa20.54■□□□□ 0.88
LAMP1-203ENST00000472564 DHX16O60231 1041 aaKnown RBP20.53■□□□□ 0.88
LAMP1-203ENST00000472564 CCDC192P0DO97 292 aa20.53■□□□□ 0.88
LAMP1-203ENST00000472564 SPC24Q8NBT2 197 aa20.53■□□□□ 0.88
LAMP1-203ENST00000472564 GPRASP1Q5JY77 1395 aa20.53■□□□□ 0.88
LAMP1-203ENST00000472564 CEBPZQ03701 1054 aaKnown RBP20.52■□□□□ 0.88
LAMP1-203ENST00000472564 AEBP1Q8IUX7 1158 aa20.52■□□□□ 0.88
LAMP1-203ENST00000472564 LRPPRCP42704 1394 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms