RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 RGPD8O14715 1765 aaPredicted RBP14.35□□□□□ -0.11
UBE2F-220ENST00000472479 CC2D1BQ5T0F9 858 aaKnown RBP14.35□□□□□ -0.11
UBE2F-220ENST00000472479 NSD3Q9BZ95 1437 aa14.35□□□□□ -0.11
UBE2F-220ENST00000472479 ANP32CO43423 234 aa14.34□□□□□ -0.11
UBE2F-220ENST00000472479 NUTM2GQ5VZR2 741 aa14.34□□□□□ -0.11
UBE2F-220ENST00000472479 TTC21BQ7Z4L5 1316 aa14.34□□□□□ -0.11
UBE2F-220ENST00000472479 POLR3AO14802 1390 aaPredicted RBP14.34□□□□□ -0.11
UBE2F-220ENST00000472479 NPM3O75607 178 aaKnown RBP14.33□□□□□ -0.12
UBE2F-220ENST00000472479 NLRP6P59044 892 aa14.33□□□□□ -0.12
UBE2F-220ENST00000472479 USP6P35125 1406 aa14.32□□□□□ -0.12
UBE2F-220ENST00000472479 CPSF1Q10570 1443 aaKnown RBP14.32□□□□□ -0.12
UBE2F-220ENST00000472479 TTC21AQ8NDW8 1320 aa14.32□□□□□ -0.12
UBE2F-220ENST00000472479 DCAF8L1A6NGE4 600 aa14.32□□□□□ -0.12
UBE2F-220ENST00000472479 HAP1P54257 671 aaPredicted RBP14.32□□□□□ -0.12
UBE2F-220ENST00000472479 MORC1Q86VD1 984 aa14.32□□□□□ -0.12
UBE2F-220ENST00000472479 COG3Q96JB2 828 aa14.32□□□□□ -0.12
UBE2F-220ENST00000472479 GGNBP2Q9H3C7 697 aa14.32□□□□□ -0.12
UBE2F-220ENST00000472479 EDC4Q6P2E9 1401 aaKnown RBP14.32□□□□□ -0.12
UBE2F-220ENST00000472479 NME9Q86XW9 330 aa14.31□□□□□ -0.12
UBE2F-220ENST00000472479 LRRC59Q96AG4 307 aaKnown RBP14.31□□□□□ -0.12
UBE2F-220ENST00000472479 KIF1AQ12756 1690 aa14.31□□□□□ -0.12
UBE2F-220ENST00000472479 SOX12O15370 315 aa14.31□□□□□ -0.12
UBE2F-220ENST00000472479 TNNT2P45379 298 aaPredicted RBP14.31□□□□□ -0.12
UBE2F-220ENST00000472479 NLRP13Q86W25 1043 aa14.31□□□□□ -0.12
UBE2F-220ENST00000472479 BRD4O60885 1362 aaPredicted RBP14.3□□□□□ -0.12
UBE2F-220ENST00000472479 TOPAZ1Q8N9V7 1692 aa14.3□□□□□ -0.12
UBE2F-220ENST00000472479 PER1O15534 1290 aaPredicted RBP14.3□□□□□ -0.12
UBE2F-220ENST00000472479 CD163L1Q9NR16 1453 aa14.29□□□□□ -0.12
UBE2F-220ENST00000472479 MYOM1P52179 1685 aa14.29□□□□□ -0.12
UBE2F-220ENST00000472479 ZBTB7CA1YPR0 619 aa14.29□□□□□ -0.12
UBE2F-220ENST00000472479 FYB1O15117 783 aa14.29□□□□□ -0.12
UBE2F-220ENST00000472479 ROBO1Q9Y6N7 1651 aa14.28□□□□□ -0.12
UBE2F-220ENST00000472479 SOS2Q07890 1332 aaPredicted RBP14.28□□□□□ -0.12
UBE2F-220ENST00000472479 ZRANB1Q9UGI0 708 aa14.28□□□□□ -0.12
UBE2F-220ENST00000472479 SBNO1A3KN83 1393 aa14.27□□□□□ -0.13
UBE2F-220ENST00000472479 SPATA31A3Q5VYP0 1347 aa14.27□□□□□ -0.13
UBE2F-220ENST00000472479 AMER1Q5JTC6 1135 aaPredicted RBP14.26□□□□□ -0.13
UBE2F-220ENST00000472479 ARHGEF10O15013 1369 aa14.26□□□□□ -0.13
UBE2F-220ENST00000472479 HSPA1LP34931 641 aa14.25□□□□□ -0.13
UBE2F-220ENST00000472479 NSD2O96028 1365 aa14.25□□□□□ -0.13
UBE2F-220ENST00000472479 PPM1GO15355 546 aaPredicted RBP14.25□□□□□ -0.13
UBE2F-220ENST00000472479 RALBP1Q15311 655 aa14.25□□□□□ -0.13
UBE2F-220ENST00000472479 FBXO41Q8TF61 875 aa14.25□□□□□ -0.13
UBE2F-220ENST00000472479 TNS3Q68CZ2 1445 aa14.24□□□□□ -0.13
UBE2F-220ENST00000472479 AKAP12Q02952 1782 aa14.24□□□□□ -0.13
UBE2F-220ENST00000472479 NUTM2BA6NNL0 878 aaPredicted RBP14.24□□□□□ -0.13
UBE2F-220ENST00000472479 NUTM2EB1AL46 878 aaPredicted RBP14.24□□□□□ -0.13
UBE2F-220ENST00000472479 NUTM2AQ8IVF1 878 aaPredicted RBP14.24□□□□□ -0.13
UBE2F-220ENST00000472479 KCNH5Q8NCM2 988 aa14.24□□□□□ -0.13
UBE2F-220ENST00000472479 CABLES1Q8TDN4 633 aa14.24□□□□□ -0.13
UBE2F-220ENST00000472479 KCNA4P22459 653 aa14.23□□□□□ -0.13
UBE2F-220ENST00000472479 PXDNQ92626 1479 aa14.23□□□□□ -0.13
UBE2F-220ENST00000472479 SSH2Q76I76 1423 aa14.22□□□□□ -0.13
UBE2F-220ENST00000472479 PRKRIP1Q9H875 184 aaPredicted RBP14.22□□□□□ -0.13
UBE2F-220ENST00000472479 NPC1L1Q9UHC9 1359 aa14.21□□□□□ -0.13
UBE2F-220ENST00000472479 ZC3H6P61129 1189 aaKnown RBP14.21□□□□□ -0.13
UBE2F-220ENST00000472479 PHLPP1O60346 1717 aa14.21□□□□□ -0.13
UBE2F-220ENST00000472479 MON2Q7Z3U7 1717 aa14.21□□□□□ -0.13
UBE2F-220ENST00000472479 GCP02774 474 aa14.2□□□□□ -0.14
UBE2F-220ENST00000472479 AMPHP49418 695 aa14.2□□□□□ -0.14
UBE2F-220ENST00000472479 AHDC1Q5TGY3 1603 aaPredicted RBP14.2□□□□□ -0.14
UBE2F-220ENST00000472479 USP31Q70CQ4 1352 aa14.2□□□□□ -0.14
UBE2F-220ENST00000472479 FBLN1P23142 703 aa14.19□□□□□ -0.14
UBE2F-220ENST00000472479 NHSL1Q5SYE7 1610 aa14.19□□□□□ -0.14
UBE2F-220ENST00000472479 JCADQ9P266 1359 aa14.18□□□□□ -0.14
UBE2F-220ENST00000472479 ADAMTS2O95450 1211 aa14.18□□□□□ -0.14
UBE2F-220ENST00000472479 RRS1Q15050 365 aaKnown RBP14.18□□□□□ -0.14
UBE2F-220ENST00000472479 MEX3CQ5U5Q3 659 aaKnown RBP14.18□□□□□ -0.14
UBE2F-220ENST00000472479 MIER1Q8N108 512 aa14.18□□□□□ -0.14
UBE2F-220ENST00000472479 CFAP53Q96M91 514 aa14.18□□□□□ -0.14
UBE2F-220ENST00000472479 MYBBP1AQ9BQG0 1328 aaKnown RBP14.17□□□□□ -0.14
UBE2F-220ENST00000472479 PPP2R1AP30153 589 aa14.17□□□□□ -0.14
UBE2F-220ENST00000472479 MTHFSP49914 203 aa14.16□□□□□ -0.14
UBE2F-220ENST00000472479 PRDM11Q9NQV5 511 aa14.16□□□□□ -0.14
UBE2F-220ENST00000472479 KIF20BQ96Q89 1820 aa14.16□□□□□ -0.14
UBE2F-220ENST00000472479 PNPLA6Q8IY17 1366 aa14.16□□□□□ -0.14
UBE2F-220ENST00000472479 NRKQ7Z2Y5 1582 aa14.15□□□□□ -0.14
UBE2F-220ENST00000472479 OVOS2A0A0J9YW53 1432 aa14.15□□□□□ -0.14
UBE2F-220ENST00000472479 OVOS2Q6IE36 1432 aa14.15□□□□□ -0.14
UBE2F-220ENST00000472479 TRPM3Q9HCF6 1732 aaPredicted RBP14.15□□□□□ -0.14
UBE2F-220ENST00000472479 CHRNA2Q15822 529 aa14.14□□□□□ -0.15
UBE2F-220ENST00000472479 ILDR1Q86SU0 546 aaPredicted RBP14.14□□□□□ -0.15
UBE2F-220ENST00000472479 EMILIN1Q9Y6C2 1016 aa14.14□□□□□ -0.15
UBE2F-220ENST00000472479 USP19O94966 1318 aa14.14□□□□□ -0.15
UBE2F-220ENST00000472479 PIK3C2AO00443 1686 aa14.14□□□□□ -0.15
UBE2F-220ENST00000472479 PARD3Q8TEW0 1356 aa14.14□□□□□ -0.15
UBE2F-220ENST00000472479 EVA1CP58658 441 aa14.13□□□□□ -0.15
UBE2F-220ENST00000472479 LTV1Q96GA3 475 aaPredicted RBP14.13□□□□□ -0.15
UBE2F-220ENST00000472479 MRS2Q9HD23 443 aa14.13□□□□□ -0.15
UBE2F-220ENST00000472479 POLKQ9UBT6 870 aa14.13□□□□□ -0.15
UBE2F-220ENST00000472479 COL16A1Q07092 1604 aaPredicted RBP14.13□□□□□ -0.15
UBE2F-220ENST00000472479 MAP3K19Q56UN5 1328 aa14.12□□□□□ -0.15
UBE2F-220ENST00000472479 CSB-PGBD3P0DP91 1061 aa14.12□□□□□ -0.15
UBE2F-220ENST00000472479 NGLY1Q96IV0 654 aa14.12□□□□□ -0.15
UBE2F-220ENST00000472479 SPATA31A6Q5VVP1 1343 aa14.12□□□□□ -0.15
UBE2F-220ENST00000472479 AATKQ6ZMQ8 1374 aa14.12□□□□□ -0.15
UBE2F-220ENST00000472479 ALS2Q96Q42 1657 aa14.11□□□□□ -0.15
UBE2F-220ENST00000472479 ARHGEF25Q86VW2 580 aa14.11□□□□□ -0.15
UBE2F-220ENST00000472479 KIAA0232Q92628 1395 aa14.11□□□□□ -0.15
UBE2F-220ENST00000472479 NUDCQ9Y266 331 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms