RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 NBPF1Q3BBV0 1214 aa17.01■□□□□ 0.31
CLRN1-205ENST00000472224 MINK1Q8N4C8 1332 aaPredicted RBP17■□□□□ 0.31
CLRN1-205ENST00000472224 ADGRB2O60241 1585 aa17■□□□□ 0.31
CLRN1-205ENST00000472224 BAG6P46379 1132 aa17■□□□□ 0.31
CLRN1-205ENST00000472224 SIRT1Q96EB6 747 aa17■□□□□ 0.31
CLRN1-205ENST00000472224 HIRIP3Q9BW71 556 aaPredicted RBP16.99■□□□□ 0.31
CLRN1-205ENST00000472224 ROCK2O75116 1388 aaKnown RBP16.99■□□□□ 0.31
CLRN1-205ENST00000472224 QRICH2Q9H0J4 1663 aa16.98■□□□□ 0.31
CLRN1-205ENST00000472224 R3HDM1Q15032 1099 aaKnown RBP16.98■□□□□ 0.31
CLRN1-205ENST00000472224 SLC4A2P04920 1241 aa16.97■□□□□ 0.31
CLRN1-205ENST00000472224 EN1Q05925 392 aaPredicted RBP16.97■□□□□ 0.31
CLRN1-205ENST00000472224 YY1P25490 414 aa16.95■□□□□ 0.3
CLRN1-205ENST00000472224 CCER1Q8TC90 406 aaPredicted RBP16.95■□□□□ 0.3
CLRN1-205ENST00000472224 CABLES1Q8TDN4 633 aa16.95■□□□□ 0.3
CLRN1-205ENST00000472224 CCDC9Q9Y3X0 531 aaKnown RBP16.95■□□□□ 0.3
CLRN1-205ENST00000472224 DISP2A7MBM2 1401 aa16.95■□□□□ 0.3
CLRN1-205ENST00000472224 TNS3Q68CZ2 1445 aa16.95■□□□□ 0.3
CLRN1-205ENST00000472224 ZBTB22O15209 634 aa16.94■□□□□ 0.3
CLRN1-205ENST00000472224 NBPF8Q3BBV2 869 aa16.94■□□□□ 0.3
CLRN1-205ENST00000472224 FAM182BQ5T319 152 aa16.93■□□□□ 0.3
CLRN1-205ENST00000472224 THSD7AQ9UPZ6 1657 aa16.93■□□□□ 0.3
CLRN1-205ENST00000472224 TULP4Q9NRJ4 1543 aa16.92■□□□□ 0.3
CLRN1-205ENST00000472224 ITSN1Q15811 1721 aa16.92■□□□□ 0.3
CLRN1-205ENST00000472224 EIF3AQ14152 1382 aaKnown RBP16.91■□□□□ 0.3
CLRN1-205ENST00000472224 KRT28Q7Z3Y7 464 aa16.91■□□□□ 0.3
CLRN1-205ENST00000472224 CENPJQ9HC77 1338 aaPredicted RBP16.91■□□□□ 0.3
CLRN1-205ENST00000472224 RREB1Q92766 1687 aa16.91■□□□□ 0.3
CLRN1-205ENST00000472224 ANKARQ7Z5J8 1434 aa16.9■□□□□ 0.3
CLRN1-205ENST00000472224 PLEKHG5O94827 1062 aa16.9■□□□□ 0.3
CLRN1-205ENST00000472224 FAM98CQ17RN3 349 aaKnown RBP16.9■□□□□ 0.3
CLRN1-205ENST00000472224 CLSPNQ9HAW4 1339 aa16.9■□□□□ 0.3
CLRN1-205ENST00000472224 A0A0G2JS52 829 aa16.89■□□□□ 0.29
CLRN1-205ENST00000472224 FAM83GA6ND36 823 aa16.89■□□□□ 0.29
CLRN1-205ENST00000472224 WASLO00401 505 aaPredicted RBP16.89■□□□□ 0.29
CLRN1-205ENST00000472224 HAP1P54257 671 aaPredicted RBP16.89■□□□□ 0.29
CLRN1-205ENST00000472224 MYT1Q01538 1121 aa16.89■□□□□ 0.29
CLRN1-205ENST00000472224 EZH2Q15910 746 aaKnown RBP16.89■□□□□ 0.29
CLRN1-205ENST00000472224 NUP188Q5SRE5 1749 aa16.89■□□□□ 0.29
CLRN1-205ENST00000472224 COL14A1Q05707 1796 aaKnown RBP16.88■□□□□ 0.29
CLRN1-205ENST00000472224 CARD11Q9BXL7 1154 aa16.87■□□□□ 0.29
CLRN1-205ENST00000472224 PHF8Q9UPP1 1060 aa16.87■□□□□ 0.29
CLRN1-205ENST00000472224 GPRASP1Q5JY77 1395 aa16.87■□□□□ 0.29
CLRN1-205ENST00000472224 TRPM3Q9HCF6 1732 aaPredicted RBP16.87■□□□□ 0.29
CLRN1-205ENST00000472224 TOPAZ1Q8N9V7 1692 aa16.86■□□□□ 0.29
CLRN1-205ENST00000472224 CAMTA1Q9Y6Y1 1673 aa16.86■□□□□ 0.29
CLRN1-205ENST00000472224 PMFBP1Q8TBY8 1022 aa16.86■□□□□ 0.29
CLRN1-205ENST00000472224 CRYBG1Q9Y4K1 1723 aa16.86■□□□□ 0.29
CLRN1-205ENST00000472224 PRR36Q9H6K5 1346 aa16.86■□□□□ 0.29
CLRN1-205ENST00000472224 ATP7BP35670 1465 aa16.86■□□□□ 0.29
CLRN1-205ENST00000472224 CAMKK2Q96RR4 588 aa16.85■□□□□ 0.29
CLRN1-205ENST00000472224 CDK19Q9BWU1 502 aa16.85■□□□□ 0.29
CLRN1-205ENST00000472224 SBNO1A3KN83 1393 aa16.85■□□□□ 0.29
CLRN1-205ENST00000472224 ALS2Q96Q42 1657 aa16.84■□□□□ 0.29
CLRN1-205ENST00000472224 ARHGEF10O15013 1369 aa16.83■□□□□ 0.28
CLRN1-205ENST00000472224 SRPK2P78362 688 aaKnown RBP16.83■□□□□ 0.28
CLRN1-205ENST00000472224 BTG4Q9NY30 223 aa16.83■□□□□ 0.28
CLRN1-205ENST00000472224 NUDT16Q96DE0 195 aaKnown RBP16.82■□□□□ 0.28
CLRN1-205ENST00000472224 SPATA31A5Q5VU36 1347 aa16.81■□□□□ 0.28
CLRN1-205ENST00000472224 SPATA31A7Q8IWB4 1347 aa16.81■□□□□ 0.28
CLRN1-205ENST00000472224 PSME1Q06323 249 aa16.81■□□□□ 0.28
CLRN1-205ENST00000472224 LMOD2Q6P5Q4 547 aa16.8■□□□□ 0.28
CLRN1-205ENST00000472224 NGDNQ8NEJ9 315 aaKnown RBP16.8■□□□□ 0.28
CLRN1-205ENST00000472224 CABP2Q9NPB3 220 aa16.8■□□□□ 0.28
CLRN1-205ENST00000472224 EVC2Q86UK5 1308 aa16.79■□□□□ 0.28
CLRN1-205ENST00000472224 PARD3Q8TEW0 1356 aa16.78■□□□□ 0.28
CLRN1-205ENST00000472224 TRIM37O94972 964 aa16.78■□□□□ 0.28
CLRN1-205ENST00000472224 UTRNP46939 3433 aa16.77■□□□□ 0.28
CLRN1-205ENST00000472224 TIMELESSQ9UNS1 1208 aa16.77■□□□□ 0.28
CLRN1-205ENST00000472224 PPIP5K1Q6PFW1 1433 aa16.77■□□□□ 0.27
CLRN1-205ENST00000472224 FOXD4L1Q9NU39 408 aa16.75■□□□□ 0.27
CLRN1-205ENST00000472224 CCDC61Q9Y6R9 512 aa16.75■□□□□ 0.27
CLRN1-205ENST00000472224 NINLQ9Y2I6 1382 aa16.75■□□□□ 0.27
CLRN1-205ENST00000472224 PAK3O75914 559 aaPredicted RBP16.74■□□□□ 0.27
CLRN1-205ENST00000472224 APBA3O96018 575 aa16.74■□□□□ 0.27
CLRN1-205ENST00000472224 USP47Q96K76 1375 aa16.74■□□□□ 0.27
CLRN1-205ENST00000472224 SBNO2Q9Y2G9 1366 aa16.73■□□□□ 0.27
CLRN1-205ENST00000472224 ACEP12821 1306 aa16.72■□□□□ 0.27
CLRN1-205ENST00000472224 SPATA31A1Q5TZJ5 1347 aa16.72■□□□□ 0.27
CLRN1-205ENST00000472224 CASZ1Q86V15 1759 aa16.72■□□□□ 0.27
CLRN1-205ENST00000472224 FAM196AQ6ZSG2 479 aa16.72■□□□□ 0.27
CLRN1-205ENST00000472224 PHRF1Q9P1Y6 1649 aaKnown RBP16.71■□□□□ 0.27
CLRN1-205ENST00000472224 ST20-MTHFSA0A0A6YYL1 179 aa16.71■□□□□ 0.27
CLRN1-205ENST00000472224 PPP1R1BQ9UD71 204 aaPredicted RBP16.71■□□□□ 0.27
CLRN1-205ENST00000472224 POLR3AO14802 1390 aaPredicted RBP16.71■□□□□ 0.27
CLRN1-205ENST00000472224 AKAP12Q02952 1782 aa16.71■□□□□ 0.27
CLRN1-205ENST00000472224 NRKQ7Z2Y5 1582 aa16.7■□□□□ 0.26
CLRN1-205ENST00000472224 KCNQ2O43526 872 aa16.7■□□□□ 0.26
CLRN1-205ENST00000472224 SPON1Q9HCB6 807 aa16.7■□□□□ 0.26
CLRN1-205ENST00000472224 PLEKHG3A1L390 1219 aa16.69■□□□□ 0.26
CLRN1-205ENST00000472224 ZNF784Q8NCA9 323 aaPredicted RBP16.69■□□□□ 0.26
CLRN1-205ENST00000472224 CABP1Q9NZU7 370 aa16.69■□□□□ 0.26
CLRN1-205ENST00000472224 MYOM1P52179 1685 aa16.69■□□□□ 0.26
CLRN1-205ENST00000472224 RGPD3A6NKT7 1758 aaPredicted RBP16.67■□□□□ 0.26
CLRN1-205ENST00000472224 RGPD4Q7Z3J3 1758 aa16.67■□□□□ 0.26
CLRN1-205ENST00000472224 NBPF14Q5TI25 921 aa16.67■□□□□ 0.26
CLRN1-205ENST00000472224 IFFO2Q5TF58 517 aa16.66■□□□□ 0.26
CLRN1-205ENST00000472224 NUTM2GQ5VZR2 741 aa16.66■□□□□ 0.26
CLRN1-205ENST00000472224 TMC1Q8TDI8 760 aa16.66■□□□□ 0.26
CLRN1-205ENST00000472224 MON2Q7Z3U7 1717 aa16.65■□□□□ 0.26
CLRN1-205ENST00000472224 USP6P35125 1406 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms