RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 CASKIN1Q8WXD9 1431 aa16.06■□□□□ 0.16
SPC25-203ENST00000472216 KANK1Q14678 1352 aa16.06■□□□□ 0.16
SPC25-203ENST00000472216 PLEKHG5O94827 1062 aa16.06■□□□□ 0.16
SPC25-203ENST00000472216 NLGN2Q8NFZ4 835 aa16.06■□□□□ 0.16
SPC25-203ENST00000472216 KIAA1210Q9ULL0 1709 aa16.05■□□□□ 0.16
SPC25-203ENST00000472216 ABHD8Q96I13 439 aa16.04■□□□□ 0.16
SPC25-203ENST00000472216 C11orf95C9JLR9 678 aaPredicted RBP16.03■□□□□ 0.16
SPC25-203ENST00000472216 RBM46Q8TBY0 533 aaKnown RBP16.03■□□□□ 0.16
SPC25-203ENST00000472216 PRDM10Q9NQV6 1147 aa16.03■□□□□ 0.16
SPC25-203ENST00000472216 POLD1P28340 1107 aa16.01■□□□□ 0.15
SPC25-203ENST00000472216 FSTL1Q12841 308 aa16.01■□□□□ 0.15
SPC25-203ENST00000472216 PROM2Q8N271 834 aa16■□□□□ 0.15
SPC25-203ENST00000472216 MYO5BQ9ULV0 1848 aa16■□□□□ 0.15
SPC25-203ENST00000472216 METP08581 1390 aa16■□□□□ 0.15
SPC25-203ENST00000472216 NRAPQ86VF7 1730 aa15.99■□□□□ 0.15
SPC25-203ENST00000472216 SPATA31A1Q5TZJ5 1347 aa15.98■□□□□ 0.15
SPC25-203ENST00000472216 RGPD3A6NKT7 1758 aaPredicted RBP15.98■□□□□ 0.15
SPC25-203ENST00000472216 RGPD4Q7Z3J3 1758 aa15.98■□□□□ 0.15
SPC25-203ENST00000472216 CCDC85CA6NKD9 419 aa15.96■□□□□ 0.15
SPC25-203ENST00000472216 KCNA4P22459 653 aa15.96■□□□□ 0.15
SPC25-203ENST00000472216 KRT28Q7Z3Y7 464 aa15.96■□□□□ 0.15
SPC25-203ENST00000472216 C16orf71Q8IYS4 520 aaPredicted RBP15.96■□□□□ 0.15
SPC25-203ENST00000472216 RRBP1Q9P2E9 1410 aaKnown RBP15.95■□□□□ 0.14
SPC25-203ENST00000472216 GCC2Q8IWJ2 1684 aa15.94■□□□□ 0.14
SPC25-203ENST00000472216 TNRC18O15417 2968 aaPredicted RBP15.94■□□□□ 0.14
SPC25-203ENST00000472216 PDE4DIPQ5VU43 2346 aa15.94■□□□□ 0.14
SPC25-203ENST00000472216 CCDC144AA2RUR9 1427 aa15.94■□□□□ 0.14
SPC25-203ENST00000472216 LMOD2Q6P5Q4 547 aa15.93■□□□□ 0.14
SPC25-203ENST00000472216 CNKSR2Q8WXI2 1034 aa15.93■□□□□ 0.14
SPC25-203ENST00000472216 LMTK2Q8IWU2 1503 aa15.93■□□□□ 0.14
SPC25-203ENST00000472216 DUOX2Q9NRD8 1548 aa15.93■□□□□ 0.14
SPC25-203ENST00000472216 ARHGEF5Q12774 1597 aa15.92■□□□□ 0.14
SPC25-203ENST00000472216 DHX57Q6P158 1386 aaKnown RBP15.92■□□□□ 0.14
SPC25-203ENST00000472216 PSME1Q06323 249 aa15.91■□□□□ 0.14
SPC25-203ENST00000472216 TXNRD1Q16881 649 aa15.91■□□□□ 0.14
SPC25-203ENST00000472216 BARGINQ6ZT62 677 aa15.9■□□□□ 0.14
SPC25-203ENST00000472216 PMFBP1Q8TBY8 1022 aa15.9■□□□□ 0.14
SPC25-203ENST00000472216 TNS3Q68CZ2 1445 aa15.9■□□□□ 0.14
SPC25-203ENST00000472216 FOXN1O15353 648 aa15.89■□□□□ 0.13
SPC25-203ENST00000472216 UBTFP17480 764 aaKnown RBP15.89■□□□□ 0.13
SPC25-203ENST00000472216 NCBP3Q53F19 620 aaKnown RBP15.89■□□□□ 0.13
SPC25-203ENST00000472216 SLC16A10Q8TF71 515 aa15.88■□□□□ 0.13
SPC25-203ENST00000472216 NMRK2Q9NPI5 230 aa15.88■□□□□ 0.13
SPC25-203ENST00000472216 USP35Q9P2H5 1018 aa15.88■□□□□ 0.13
SPC25-203ENST00000472216 ARHGEF28Q8N1W1 1705 aaKnown RBP15.88■□□□□ 0.13
SPC25-203ENST00000472216 CTCFP49711 727 aaPredicted RBP15.87■□□□□ 0.13
SPC25-203ENST00000472216 ARHGEF10O15013 1369 aa15.87■□□□□ 0.13
SPC25-203ENST00000472216 COL14A1Q05707 1796 aaKnown RBP15.86■□□□□ 0.13
SPC25-203ENST00000472216 TULP4Q9NRJ4 1543 aa15.86■□□□□ 0.13
SPC25-203ENST00000472216 DLL1O00548 723 aa15.85■□□□□ 0.13
SPC25-203ENST00000472216 ERBINQ96RT1 1412 aa15.85■□□□□ 0.13
SPC25-203ENST00000472216 NUTM2FA1L443 756 aa15.83■□□□□ 0.12
SPC25-203ENST00000472216 STRN4Q9NRL3 753 aa15.83■□□□□ 0.12
SPC25-203ENST00000472216 ROBO2Q9HCK4 1378 aa15.83■□□□□ 0.12
SPC25-203ENST00000472216 NRXN3Q9Y4C0 1643 aa15.83■□□□□ 0.12
SPC25-203ENST00000472216 TECPR2O15040 1411 aa15.82■□□□□ 0.12
SPC25-203ENST00000472216 OVOS2A0A0G2JMS6 1433 aa15.81■□□□□ 0.12
SPC25-203ENST00000472216 OVOS2A0A0J9YW53 1432 aa15.81■□□□□ 0.12
SPC25-203ENST00000472216 PRPF38BQ5VTL8 546 aaKnown RBP15.81■□□□□ 0.12
SPC25-203ENST00000472216 OVOS2Q6IE36 1432 aa15.81■□□□□ 0.12
SPC25-203ENST00000472216 AIDAQ96BJ3 306 aa15.81■□□□□ 0.12
SPC25-203ENST00000472216 SBNO1A3KN83 1393 aa15.8■□□□□ 0.12
SPC25-203ENST00000472216 PTF1AQ7RTS3 328 aa15.8■□□□□ 0.12
SPC25-203ENST00000472216 ABCA3Q99758 1704 aa15.8■□□□□ 0.12
SPC25-203ENST00000472216 PRAG1Q86YV5 1406 aa15.79■□□□□ 0.12
SPC25-203ENST00000472216 KIF15Q9NS87 1388 aa15.79■□□□□ 0.12
SPC25-203ENST00000472216 CFAP44Q96MT7 982 aa15.79■□□□□ 0.12
SPC25-203ENST00000472216 PRDM11Q9NQV5 511 aa15.79■□□□□ 0.12
SPC25-203ENST00000472216 HFM1A2PYH4 1435 aa15.78■□□□□ 0.12
SPC25-203ENST00000472216 EEA1Q15075 1411 aa15.78■□□□□ 0.12
SPC25-203ENST00000472216 SMC1BQ8NDV3 1235 aa15.78■□□□□ 0.12
SPC25-203ENST00000472216 LBX1P52954 281 aa15.77■□□□□ 0.12
SPC25-203ENST00000472216 TCP11L2Q8N4U5 519 aa15.77■□□□□ 0.12
SPC25-203ENST00000472216 RRP7BPQ9NSQ0 103 aa15.77■□□□□ 0.12
SPC25-203ENST00000472216 CEP162Q5TB80 1403 aa15.76■□□□□ 0.11
SPC25-203ENST00000472216 CDC42BPGQ6DT37 1551 aa15.75■□□□□ 0.11
SPC25-203ENST00000472216 EVA1CP58658 441 aa15.74■□□□□ 0.11
SPC25-203ENST00000472216 CD2APQ9Y5K6 639 aa15.73■□□□□ 0.11
SPC25-203ENST00000472216 NPM3O75607 178 aaKnown RBP15.72■□□□□ 0.11
SPC25-203ENST00000472216 THRAP3Q9Y2W1 955 aaKnown RBP15.72■□□□□ 0.11
SPC25-203ENST00000472216 KIF1AQ12756 1690 aa15.71■□□□□ 0.11
SPC25-203ENST00000472216 TOPAZ1Q8N9V7 1692 aa15.7■□□□□ 0.1
SPC25-203ENST00000472216 SBF2Q86WG5 1849 aa15.69■□□□□ 0.1
SPC25-203ENST00000472216 ZNF827Q17R98 1081 aa15.69■□□□□ 0.1
SPC25-203ENST00000472216 PHF8Q9UPP1 1060 aa15.69■□□□□ 0.1
SPC25-203ENST00000472216 PITPNM2Q9BZ72 1349 aa15.68■□□□□ 0.1
SPC25-203ENST00000472216 GCC1Q96CN9 775 aa15.67■□□□□ 0.1
SPC25-203ENST00000472216 COL24A1Q17RW2 1714 aa15.67■□□□□ 0.1
SPC25-203ENST00000472216 PEAK1Q9H792 1746 aa15.66■□□□□ 0.1
SPC25-203ENST00000472216 NAIPQ13075 1403 aa15.66■□□□□ 0.1
SPC25-203ENST00000472216 CHRNA2Q15822 529 aa15.65■□□□□ 0.1
SPC25-203ENST00000472216 ZNF326Q5BKZ1 582 aaKnown RBP15.65■□□□□ 0.1
SPC25-203ENST00000472216 POTEDQ86YR6 584 aa15.65■□□□□ 0.1
SPC25-203ENST00000472216 RNF216Q9NWF9 866 aaPredicted RBP15.65■□□□□ 0.1
SPC25-203ENST00000472216 MKRN1Q9UHC7 482 aaKnown RBP15.65■□□□□ 0.1
SPC25-203ENST00000472216 A0A0C4DFX4 3053 aa15.65■□□□□ 0.1
SPC25-203ENST00000472216 ATP7BP35670 1465 aa15.64■□□□□ 0.09
SPC25-203ENST00000472216 KDM2BQ8NHM5 1336 aa15.64■□□□□ 0.09
SPC25-203ENST00000472216 SSH2Q76I76 1423 aa15.63■□□□□ 0.09
SPC25-203ENST00000472216 HOXD11P31277 338 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms