RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 NME9Q86XW9 330 aa19.5■□□□□ 0.71
UBXN11-213ENST00000472155 CLUAP1Q96AJ1 413 aa19.5■□□□□ 0.71
UBXN11-213ENST00000472155 NOP58Q9Y2X3 529 aaKnown RBP19.5■□□□□ 0.71
UBXN11-213ENST00000472155 ANP32AP39687 249 aaKnown RBP19.5■□□□□ 0.71
UBXN11-213ENST00000472155 TMPOP42166 694 aaKnown RBP19.5■□□□□ 0.71
UBXN11-213ENST00000472155 ANKRD26Q9UPS8 1709 aa19.49■□□□□ 0.71
UBXN11-213ENST00000472155 WASLO00401 505 aaPredicted RBP19.49■□□□□ 0.71
UBXN11-213ENST00000472155 RGS3P49796 1198 aa19.49■□□□□ 0.71
UBXN11-213ENST00000472155 CCDC27Q2M243 656 aa19.49■□□□□ 0.71
UBXN11-213ENST00000472155 NUTM2FA1L443 756 aa19.49■□□□□ 0.71
UBXN11-213ENST00000472155 ADGRB2O60241 1585 aa19.49■□□□□ 0.71
UBXN11-213ENST00000472155 IPO9Q96P70 1041 aaKnown RBP19.49■□□□□ 0.71
UBXN11-213ENST00000472155 POLKQ9UBT6 870 aa19.49■□□□□ 0.71
UBXN11-213ENST00000472155 DLC1Q96QB1 1528 aa19.48■□□□□ 0.71
UBXN11-213ENST00000472155 TNRQ92752 1358 aa19.48■□□□□ 0.71
UBXN11-213ENST00000472155 EMILIN1Q9Y6C2 1016 aa19.48■□□□□ 0.71
UBXN11-213ENST00000472155 MS4A1P11836 297 aa19.48■□□□□ 0.71
UBXN11-213ENST00000472155 DIAPH1O60610 1272 aaKnown RBP19.47■□□□□ 0.71
UBXN11-213ENST00000472155 KIF20BQ96Q89 1820 aa19.47■□□□□ 0.71
UBXN11-213ENST00000472155 LTKP29376 864 aa19.47■□□□□ 0.71
UBXN11-213ENST00000472155 PPIP5K1Q6PFW1 1433 aa19.47■□□□□ 0.71
UBXN11-213ENST00000472155 NUDT16Q96DE0 195 aaKnown RBP19.46■□□□□ 0.71
UBXN11-213ENST00000472155 MED14O60244 1454 aa19.46■□□□□ 0.71
UBXN11-213ENST00000472155 HMOX1P09601 288 aa19.45■□□□□ 0.7
UBXN11-213ENST00000472155 EXOSC9Q06265 439 aaKnown RBP19.45■□□□□ 0.7
UBXN11-213ENST00000472155 PDE3AQ14432 1141 aa19.45■□□□□ 0.7
UBXN11-213ENST00000472155 PRR36Q9H6K5 1346 aa19.45■□□□□ 0.7
UBXN11-213ENST00000472155 PNPLA6Q8IY17 1366 aa19.45■□□□□ 0.7
UBXN11-213ENST00000472155 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.44■□□□□ 0.7
UBXN11-213ENST00000472155 ROBO2Q9HCK4 1378 aa19.44■□□□□ 0.7
UBXN11-213ENST00000472155 RIPK4P57078 832 aa19.44■□□□□ 0.7
UBXN11-213ENST00000472155 MAPK8IP3Q9UPT6 1336 aa19.43■□□□□ 0.7
UBXN11-213ENST00000472155 SLC26A8Q96RN1 970 aa19.43■□□□□ 0.7
UBXN11-213ENST00000472155 MAP2P11137 1827 aaKnown RBP19.43■□□□□ 0.7
UBXN11-213ENST00000472155 TMEM2Q9UHN6 1383 aa19.43■□□□□ 0.7
UBXN11-213ENST00000472155 RRS1Q15050 365 aaKnown RBP19.43■□□□□ 0.7
UBXN11-213ENST00000472155 PHACTR3Q96KR7 559 aa19.43■□□□□ 0.7
UBXN11-213ENST00000472155 CPS1P31327 1500 aa19.43■□□□□ 0.7
UBXN11-213ENST00000472155 CPSF1Q10570 1443 aaKnown RBP19.42■□□□□ 0.7
UBXN11-213ENST00000472155 MYH16Q9H6N6 1097 aa19.42■□□□□ 0.7
UBXN11-213ENST00000472155 ATP7BP35670 1465 aa19.41■□□□□ 0.7
UBXN11-213ENST00000472155 PRKAR2BP31323 418 aa19.41■□□□□ 0.7
UBXN11-213ENST00000472155 THUMPD2Q9BTF0 503 aaKnown RBP19.41■□□□□ 0.7
UBXN11-213ENST00000472155 PCDHB15Q9Y5E8 787 aa19.41■□□□□ 0.7
UBXN11-213ENST00000472155 UBR1Q8IWV7 1749 aa19.41■□□□□ 0.7
UBXN11-213ENST00000472155 ADAMTS13Q76LX8 1427 aa19.4■□□□□ 0.7
UBXN11-213ENST00000472155 LRRC7Q96NW7 1537 aa19.39■□□□□ 0.7
UBXN11-213ENST00000472155 C8orf34Q49A92 452 aa19.39■□□□□ 0.7
UBXN11-213ENST00000472155 RSPH6AQ9H0K4 717 aa19.39■□□□□ 0.7
UBXN11-213ENST00000472155 NBR1Q14596 966 aa19.39■□□□□ 0.69
UBXN11-213ENST00000472155 ZBTB47Q9UFB7 747 aaPredicted RBP19.38■□□□□ 0.69
UBXN11-213ENST00000472155 CCDC61Q9Y6R9 512 aa19.38■□□□□ 0.69
UBXN11-213ENST00000472155 SSH1Q8WYL5 1049 aa19.38■□□□□ 0.69
UBXN11-213ENST00000472155 EDC4Q6P2E9 1401 aaKnown RBP19.37■□□□□ 0.69
UBXN11-213ENST00000472155 SMC4Q9NTJ3 1288 aa19.36■□□□□ 0.69
UBXN11-213ENST00000472155 LAS1LQ9Y4W2 734 aaKnown RBP19.36■□□□□ 0.69
UBXN11-213ENST00000472155 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.35■□□□□ 0.69
UBXN11-213ENST00000472155 TECPR2O15040 1411 aa19.35■□□□□ 0.69
UBXN11-213ENST00000472155 IL13P35225 146 aa19.35■□□□□ 0.69
UBXN11-213ENST00000472155 PTPRUQ92729 1446 aa19.34■□□□□ 0.69
UBXN11-213ENST00000472155 FCHSD2O94868 740 aa19.34■□□□□ 0.69
UBXN11-213ENST00000472155 FAM135BQ49AJ0 1406 aa19.34■□□□□ 0.69
UBXN11-213ENST00000472155 CDC42BPGQ6DT37 1551 aa19.33■□□□□ 0.68
UBXN11-213ENST00000472155 TRIM27P14373 513 aa19.33■□□□□ 0.68
UBXN11-213ENST00000472155 HDGFP51858 240 aaKnown RBP19.33■□□□□ 0.68
UBXN11-213ENST00000472155 NCBP3Q53F19 620 aaKnown RBP19.33■□□□□ 0.68
UBXN11-213ENST00000472155 SOX12O15370 315 aa19.32■□□□□ 0.68
UBXN11-213ENST00000472155 SLC4A3P48751 1232 aa19.32■□□□□ 0.68
UBXN11-213ENST00000472155 KNDC1Q76NI1 1749 aa19.32■□□□□ 0.68
UBXN11-213ENST00000472155 COG3Q96JB2 828 aa19.32■□□□□ 0.68
UBXN11-213ENST00000472155 FAM161AQ3B820 660 aa19.32■□□□□ 0.68
UBXN11-213ENST00000472155 NOB1Q9ULX3 412 aaKnown RBP19.31■□□□□ 0.68
UBXN11-213ENST00000472155 ZKSCAN2Q63HK3 967 aa19.31■□□□□ 0.68
UBXN11-213ENST00000472155 FAM83GA6ND36 823 aa19.3■□□□□ 0.68
UBXN11-213ENST00000472155 ACEP12821 1306 aa19.3■□□□□ 0.68
UBXN11-213ENST00000472155 MVPQ14764 893 aaKnown RBP19.3■□□□□ 0.68
UBXN11-213ENST00000472155 DZIP1LQ8IYY4 767 aaKnown RBP19.3■□□□□ 0.68
UBXN11-213ENST00000472155 MON2Q7Z3U7 1717 aa19.3■□□□□ 0.68
UBXN11-213ENST00000472155 ELL2O00472 640 aaPredicted RBP19.29■□□□□ 0.68
UBXN11-213ENST00000472155 DCTN1Q14203 1278 aa19.29■□□□□ 0.68
UBXN11-213ENST00000472155 AEBP1Q8IUX7 1158 aa19.29■□□□□ 0.68
UBXN11-213ENST00000472155 FTSJ3Q8IY81 847 aaKnown RBP19.29■□□□□ 0.68
UBXN11-213ENST00000472155 SIRT1Q96EB6 747 aa19.29■□□□□ 0.68
UBXN11-213ENST00000472155 TSPYL6Q8N831 410 aa19.28■□□□□ 0.68
UBXN11-213ENST00000472155 PMFBP1Q8TBY8 1022 aa19.28■□□□□ 0.68
UBXN11-213ENST00000472155 PLEKHG1Q9ULL1 1385 aa19.28■□□□□ 0.68
UBXN11-213ENST00000472155 SEC24BO95487 1268 aa19.28■□□□□ 0.68
UBXN11-213ENST00000472155 C3P01024 1663 aa19.27■□□□□ 0.68
UBXN11-213ENST00000472155 NFE2L2Q16236 605 aa19.27■□□□□ 0.68
UBXN11-213ENST00000472155 AMOTL2Q9Y2J4 779 aa19.27■□□□□ 0.68
UBXN11-213ENST00000472155 AKAP12Q02952 1782 aa19.27■□□□□ 0.68
UBXN11-213ENST00000472155 IL16Q14005 1332 aa19.27■□□□□ 0.67
UBXN11-213ENST00000472155 TTC21BQ7Z4L5 1316 aa19.26■□□□□ 0.67
UBXN11-213ENST00000472155 ITPRIPQ8IWB1 547 aa19.25■□□□□ 0.67
UBXN11-213ENST00000472155 PDZRN3Q9UPQ7 1066 aa19.25■□□□□ 0.67
UBXN11-213ENST00000472155 ITSN1Q15811 1721 aa19.25■□□□□ 0.67
UBXN11-213ENST00000472155 ATF7IPQ6VMQ6 1270 aa19.25■□□□□ 0.67
UBXN11-213ENST00000472155 TMEM57Q8N5G2 664 aa19.25■□□□□ 0.67
UBXN11-213ENST00000472155 CDK12Q9NYV4 1490 aaPredicted RBP19.25■□□□□ 0.67
UBXN11-213ENST00000472155 AATKQ6ZMQ8 1374 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms