RNA–Protein interactions for RNA: ENST00000471993.1

AC078828.1-201, humanhuman

TSL 3 BASIC

Gene AC078828.1, Length 458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078828.1-201ENST00000471993 BAP1Q92560 729 aa12.55□□□□□ -0.4
AC078828.1-201ENST00000471993 KLF16Q9BXK1 252 aaPredicted RBP12.55□□□□□ -0.4
AC078828.1-201ENST00000471993 SOBPA7XYQ1 873 aa12.54□□□□□ -0.4
AC078828.1-201ENST00000471993 GSK3AP49840 483 aa12.54□□□□□ -0.4
AC078828.1-201ENST00000471993 KCNMA1Q12791 1236 aa12.54□□□□□ -0.4
AC078828.1-201ENST00000471993 C6orf229H3BNL8 230 aa12.53□□□□□ -0.4
AC078828.1-201ENST00000471993 CLCN1P35523 988 aa12.53□□□□□ -0.4
AC078828.1-201ENST00000471993 CCDC102AQ96A19 550 aa12.53□□□□□ -0.4
AC078828.1-201ENST00000471993 KCNH2Q12809 1159 aa12.52□□□□□ -0.41
AC078828.1-201ENST00000471993 WDR4P57081 412 aaKnown RBP12.51□□□□□ -0.41
AC078828.1-201ENST00000471993 DESI1Q6ICB0 168 aa12.46□□□□□ -0.41
AC078828.1-201ENST00000471993 KCTD17Q8N5Z5 321 aa12.46□□□□□ -0.41
AC078828.1-201ENST00000471993 PRR7Q8TB68 274 aa12.45□□□□□ -0.42
AC078828.1-201ENST00000471993 CDK15Q96Q40 435 aa12.44□□□□□ -0.42
AC078828.1-201ENST00000471993 MAN1A2O60476 641 aa12.43□□□□□ -0.42
AC078828.1-201ENST00000471993 PPFIA3O75145 1194 aa12.43□□□□□ -0.42
AC078828.1-201ENST00000471993 FAM174AQ8TBP5 190 aa12.43□□□□□ -0.42
AC078828.1-201ENST00000471993 SPIRE2Q8WWL2 714 aa12.43□□□□□ -0.42
AC078828.1-201ENST00000471993 ZIC2O95409 532 aaPredicted RBP12.41□□□□□ -0.42
AC078828.1-201ENST00000471993 NDUFV2P19404 249 aa12.41□□□□□ -0.42
AC078828.1-201ENST00000471993 ITPKCQ96DU7 683 aa12.41□□□□□ -0.42
AC078828.1-201ENST00000471993 ZFAND3Q9H8U3 227 aa12.41□□□□□ -0.42
AC078828.1-201ENST00000471993 MOXD2PA6NHM9 499 aa12.39□□□□□ -0.43
AC078828.1-201ENST00000471993 SPDYE5A6NIY4 337 aa12.39□□□□□ -0.43
AC078828.1-201ENST00000471993 MTMR2Q13614 643 aa12.39□□□□□ -0.43
AC078828.1-201ENST00000471993 NR3C2P08235 984 aa12.38□□□□□ -0.43
AC078828.1-201ENST00000471993 C6orf118Q5T5N4 469 aa12.38□□□□□ -0.43
AC078828.1-201ENST00000471993 TMEM151AQ8N4L1 468 aa12.37□□□□□ -0.43
AC078828.1-201ENST00000471993 KRI1Q8N9T8 703 aaKnown RBP12.37□□□□□ -0.43
AC078828.1-201ENST00000471993 RASSF7Q02833 373 aa12.36□□□□□ -0.43
AC078828.1-201ENST00000471993 NR5A1Q13285 461 aa12.36□□□□□ -0.43
AC078828.1-201ENST00000471993 FOXJ1Q92949 421 aa12.36□□□□□ -0.43
AC078828.1-201ENST00000471993 GDF11O95390 407 aa12.35□□□□□ -0.43
AC078828.1-201ENST00000471993 SSTR3P32745 418 aaPredicted RBP12.35□□□□□ -0.43
AC078828.1-201ENST00000471993 KRT76Q01546 638 aa12.35□□□□□ -0.43
AC078828.1-201ENST00000471993 LINC00528Q8N1L1 170 aa12.35□□□□□ -0.43
AC078828.1-201ENST00000471993 MEIOBQ8N635 442 aa12.35□□□□□ -0.43
AC078828.1-201ENST00000471993 LYPD8Q6UX82 237 aa12.34□□□□□ -0.43
AC078828.1-201ENST00000471993 SOS2Q07890 1332 aaPredicted RBP12.34□□□□□ -0.43
AC078828.1-201ENST00000471993 RNF225M0QZC1 329 aaPredicted RBP12.33□□□□□ -0.44
AC078828.1-201ENST00000471993 CTHP32929 405 aa12.33□□□□□ -0.44
AC078828.1-201ENST00000471993 GRM5P41594 1212 aa12.33□□□□□ -0.44
AC078828.1-201ENST00000471993 ARID5BQ14865 1188 aa12.33□□□□□ -0.44
AC078828.1-201ENST00000471993 DNMT3LQ9UJW3 386 aa12.33□□□□□ -0.44
AC078828.1-201ENST00000471993 TULP1O00294 542 aaPredicted RBP12.32□□□□□ -0.44
AC078828.1-201ENST00000471993 F12P00748 615 aaPredicted RBP12.32□□□□□ -0.44
AC078828.1-201ENST00000471993 BMP2P12643 396 aa12.32□□□□□ -0.44
AC078828.1-201ENST00000471993 UPP2O95045 317 aa12.31□□□□□ -0.44
AC078828.1-201ENST00000471993 C4orf48Q5BLP8 95 aa12.31□□□□□ -0.44
AC078828.1-201ENST00000471993 GPR161Q8N6U8 529 aaKnown RBP12.3□□□□□ -0.44
AC078828.1-201ENST00000471993 MAP10Q9P2G4 905 aa12.3□□□□□ -0.44
AC078828.1-201ENST00000471993 ADAMTS8Q9UP79 889 aa12.3□□□□□ -0.44
AC078828.1-201ENST00000471993 GJA5P36382 358 aa12.29□□□□□ -0.44
AC078828.1-201ENST00000471993 CFAP99D6REC4 459 aa12.27□□□□□ -0.45
AC078828.1-201ENST00000471993 SPTLC1O15269 473 aa12.27□□□□□ -0.45
AC078828.1-201ENST00000471993 CNTNAP3BQ96NU0 1288 aa12.27□□□□□ -0.45
AC078828.1-201ENST00000471993 CNTNAP3Q9BZ76 1288 aa12.27□□□□□ -0.45
AC078828.1-201ENST00000471993 TIMELESSQ9UNS1 1208 aa12.25□□□□□ -0.45
AC078828.1-201ENST00000471993 RSBN1LQ6PCB5 846 aaPredicted RBP12.24□□□□□ -0.45
AC078828.1-201ENST00000471993 BPHLQ86WA6 291 aaPredicted RBP12.24□□□□□ -0.45
AC078828.1-201ENST00000471993 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.23□□□□□ -0.45
AC078828.1-201ENST00000471993 ZNF385CQ66K41 422 aaPredicted RBP12.23□□□□□ -0.45
AC078828.1-201ENST00000471993 NANOS1Q8WY41 292 aaKnown RBP12.23□□□□□ -0.45
AC078828.1-201ENST00000471993 C1QTNF2Q9BXJ5 285 aa12.23□□□□□ -0.45
AC078828.1-201ENST00000471993 AGERQ15109 404 aa12.22□□□□□ -0.45
AC078828.1-201ENST00000471993 TSEN34Q9BSV6 310 aaKnown RBP12.22□□□□□ -0.45
AC078828.1-201ENST00000471993 COL25A1Q9BXS0 654 aaPredicted RBP12.22□□□□□ -0.45
AC078828.1-201ENST00000471993 FSHRP23945 695 aa12.21□□□□□ -0.45
AC078828.1-201ENST00000471993 PTSQ03393 145 aa12.21□□□□□ -0.45
AC078828.1-201ENST00000471993 MAP4K5Q9Y4K4 846 aa12.21□□□□□ -0.45
AC078828.1-201ENST00000471993 TTLL8A6PVC2 850 aa12.2□□□□□ -0.46
AC078828.1-201ENST00000471993 TTLL12Q14166 644 aaPredicted RBP12.2□□□□□ -0.46
AC078828.1-201ENST00000471993 AMHR2Q16671 573 aa12.2□□□□□ -0.46
AC078828.1-201ENST00000471993 PCDHB15Q9Y5E8 787 aa12.2□□□□□ -0.46
AC078828.1-201ENST00000471993 DNMT3AQ9Y6K1 912 aaPredicted RBP12.2□□□□□ -0.46
AC078828.1-201ENST00000471993 HRCP23327 699 aa12.19□□□□□ -0.46
AC078828.1-201ENST00000471993 RNFT1Q5M7Z0 435 aa12.19□□□□□ -0.46
AC078828.1-201ENST00000471993 GIGYF2Q6Y7W6 1299 aaKnown RBP12.19□□□□□ -0.46
AC078828.1-201ENST00000471993 SH3RF1Q7Z6J0 888 aa12.19□□□□□ -0.46
AC078828.1-201ENST00000471993 BEGAINQ9BUH8 593 aa12.19□□□□□ -0.46
AC078828.1-201ENST00000471993 TBC1D2Q9BYX2 928 aa12.19□□□□□ -0.46
AC078828.1-201ENST00000471993 SVOPQ8N4V2 548 aa12.18□□□□□ -0.46
AC078828.1-201ENST00000471993 ZBTB3Q9H5J0 574 aa12.18□□□□□ -0.46
AC078828.1-201ENST00000471993 SLURP2P0DP57 97 aa12.17□□□□□ -0.46
AC078828.1-201ENST00000471993 TRMT44Q8IYL2 757 aaKnown RBP12.17□□□□□ -0.46
AC078828.1-201ENST00000471993 EMILIN1Q9Y6C2 1016 aa12.17□□□□□ -0.46
AC078828.1-201ENST00000471993 PER1O15534 1290 aaPredicted RBP12.16□□□□□ -0.46
AC078828.1-201ENST00000471993 IGHA1P01876 353 aa12.16□□□□□ -0.46
AC078828.1-201ENST00000471993 DIXDC1Q155Q3 683 aa12.16□□□□□ -0.46
AC078828.1-201ENST00000471993 ARHGEF15O94989 841 aa12.15□□□□□ -0.46
AC078828.1-201ENST00000471993 PRPF38BQ5VTL8 546 aaKnown RBP12.15□□□□□ -0.46
AC078828.1-201ENST00000471993 CCDC155Q8N6L0 562 aa12.15□□□□□ -0.46
AC078828.1-201ENST00000471993 GPAT2Q6NUI2 795 aa12.14□□□□□ -0.47
AC078828.1-201ENST00000471993 VASH1Q7L8A9 365 aaPredicted RBP12.14□□□□□ -0.47
AC078828.1-201ENST00000471993 CCDC116Q8IYX3 515 aa12.14□□□□□ -0.47
AC078828.1-201ENST00000471993 WHAMMQ8TF30 809 aa12.14□□□□□ -0.47
AC078828.1-201ENST00000471993 IRS1P35568 1242 aa12.12□□□□□ -0.47
AC078828.1-201ENST00000471993 SH3BP5LQ7L8J4 393 aa12.12□□□□□ -0.47
AC078828.1-201ENST00000471993 ARMC2Q8NEN0 867 aa12.12□□□□□ -0.47
AC078828.1-201ENST00000471993 SLC35F4A4IF30 521 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms