RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 ANKRD50Q9ULJ7 1429 aa8.81□□□□□ -1
SMNDC1-204ENST00000471297 ABCC1P33527 1531 aa8.81□□□□□ -1
SMNDC1-204ENST00000471297 NBPF26B4DH59 902 aa8.81□□□□□ -1
SMNDC1-204ENST00000471297 BHMG1C9JSJ3 638 aaPredicted RBP8.81□□□□□ -1
SMNDC1-204ENST00000471297 SMAPO00193 183 aa8.81□□□□□ -1
SMNDC1-204ENST00000471297 TRIM66O15016 1216 aa8.81□□□□□ -1
SMNDC1-204ENST00000471297 EYA1Q99502 592 aa8.81□□□□□ -1
SMNDC1-204ENST00000471297 MPHOSPH9Q99550 1183 aa8.81□□□□□ -1
SMNDC1-204ENST00000471297 PLSCR2Q9NRY7 297 aa8.81□□□□□ -1
SMNDC1-204ENST00000471297 ARHGEF12Q9NZN5 1544 aa8.8□□□□□ -1
SMNDC1-204ENST00000471297 METTL3Q86U44 580 aaKnown RBP8.8□□□□□ -1
SMNDC1-204ENST00000471297 PXYLP1Q8TE99 480 aa8.8□□□□□ -1
SMNDC1-204ENST00000471297 KIF15Q9NS87 1388 aa8.8□□□□□ -1
SMNDC1-204ENST00000471297 GLI2P10070 1586 aa8.8□□□□□ -1
SMNDC1-204ENST00000471297 SPAG9O60271 1321 aaKnown RBP8.8□□□□□ -1
SMNDC1-204ENST00000471297 CFAP74Q9C0B2 1584 aa8.79□□□□□ -1
SMNDC1-204ENST00000471297 HRO43593 1189 aa8.79□□□□□ -1
SMNDC1-204ENST00000471297 STAC3Q96MF2 364 aa8.79□□□□□ -1
SMNDC1-204ENST00000471297 PHOX2BQ99453 314 aa8.79□□□□□ -1
SMNDC1-204ENST00000471297 SCAPERQ9BY12 1400 aa8.79□□□□□ -1
SMNDC1-204ENST00000471297 TRAPPC8Q9Y2L5 1435 aa8.79□□□□□ -1
SMNDC1-204ENST00000471297 ADGRL1O94910 1474 aa8.78□□□□□ -1
SMNDC1-204ENST00000471297 NEO1Q92859 1461 aa8.78□□□□□ -1
SMNDC1-204ENST00000471297 AFAP1Q8N556 730 aa8.78□□□□□ -1
SMNDC1-204ENST00000471297 SEPT9Q9UHD8 586 aaPredicted RBP8.78□□□□□ -1
SMNDC1-204ENST00000471297 KDM6BO15054 1643 aa8.77□□□□□ -1.01
SMNDC1-204ENST00000471297 DUOX2Q9NRD8 1548 aa8.77□□□□□ -1.01
SMNDC1-204ENST00000471297 FAM69CQ0P6D2 419 aa8.77□□□□□ -1.01
SMNDC1-204ENST00000471297 MRPL50Q8N5N7 158 aaKnown RBP8.77□□□□□ -1.01
SMNDC1-204ENST00000471297 NBPF3Q9H094 633 aa8.77□□□□□ -1.01
SMNDC1-204ENST00000471297 PCDH10Q9P2E7 1040 aa8.77□□□□□ -1.01
SMNDC1-204ENST00000471297 PLXNC1O60486 1568 aa8.77□□□□□ -1.01
SMNDC1-204ENST00000471297 RCCD1A6NED2 376 aa8.76□□□□□ -1.01
SMNDC1-204ENST00000471297 PDE4DQ08499 809 aa8.76□□□□□ -1.01
SMNDC1-204ENST00000471297 NEUROD1Q13562 356 aa8.76□□□□□ -1.01
SMNDC1-204ENST00000471297 LAPTM4BQ86VI4 370 aa8.76□□□□□ -1.01
SMNDC1-204ENST00000471297 SIN3AQ96ST3 1273 aa8.76□□□□□ -1.01
SMNDC1-204ENST00000471297 ERBINQ96RT1 1412 aa8.76□□□□□ -1.01
SMNDC1-204ENST00000471297 NUP155O75694 1391 aa8.75□□□□□ -1.01
SMNDC1-204ENST00000471297 NLRP7Q8WX94 980 aa8.75□□□□□ -1.01
SMNDC1-204ENST00000471297 MYT1LQ9UL68 1186 aa8.75□□□□□ -1.01
SMNDC1-204ENST00000471297 ZNF518AQ6AHZ1 1483 aa8.75□□□□□ -1.01
SMNDC1-204ENST00000471297 MAP3K4Q9Y6R4 1608 aa8.74□□□□□ -1.01
SMNDC1-204ENST00000471297 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.74□□□□□ -1.01
SMNDC1-204ENST00000471297 AMHR2Q16671 573 aa8.74□□□□□ -1.01
SMNDC1-204ENST00000471297 FAM98CQ17RN3 349 aaKnown RBP8.74□□□□□ -1.01
SMNDC1-204ENST00000471297 KDM5DQ9BY66 1539 aa8.74□□□□□ -1.01
SMNDC1-204ENST00000471297 DENND4BO75064 1496 aaPredicted RBP8.73□□□□□ -1.01
SMNDC1-204ENST00000471297 PZPP20742 1482 aa8.73□□□□□ -1.01
SMNDC1-204ENST00000471297 DNAJB2P25686 324 aa8.73□□□□□ -1.01
SMNDC1-204ENST00000471297 HDGFP51858 240 aaKnown RBP8.73□□□□□ -1.01
SMNDC1-204ENST00000471297 DHX29Q7Z478 1369 aaKnown RBP8.73□□□□□ -1.01
SMNDC1-204ENST00000471297 TONSLQ96HA7 1378 aa8.73□□□□□ -1.01
SMNDC1-204ENST00000471297 ANKRD30BQ9BXX2 1392 aa8.73□□□□□ -1.01
SMNDC1-204ENST00000471297 POGZQ7Z3K3 1410 aa8.72□□□□□ -1.01
SMNDC1-204ENST00000471297 TEX14Q8IWB6 1497 aa8.72□□□□□ -1.01
SMNDC1-204ENST00000471297 MLH3Q9UHC1 1453 aa8.72□□□□□ -1.01
SMNDC1-204ENST00000471297 ATP7AQ04656 1500 aa8.72□□□□□ -1.01
SMNDC1-204ENST00000471297 ZFYVE16Q7Z3T8 1539 aa8.72□□□□□ -1.01
SMNDC1-204ENST00000471297 GOLGA8CPA6NN73 597 aa8.72□□□□□ -1.01
SMNDC1-204ENST00000471297 PPP1R15AO75807 674 aaPredicted RBP8.72□□□□□ -1.01
SMNDC1-204ENST00000471297 MDM2Q00987 491 aaPredicted RBP8.72□□□□□ -1.01
SMNDC1-204ENST00000471297 ZFRQ96KR1 1074 aaKnown RBP8.72□□□□□ -1.01
SMNDC1-204ENST00000471297 DIP2BQ9P265 1576 aa8.72□□□□□ -1.01
SMNDC1-204ENST00000471297 TTLL12Q14166 644 aaPredicted RBP8.71□□□□□ -1.02
SMNDC1-204ENST00000471297 REPIN1Q9BWE0 567 aaKnown RBP8.71□□□□□ -1.02
SMNDC1-204ENST00000471297 TMEM134Q9H6X4 195 aa8.71□□□□□ -1.02
SMNDC1-204ENST00000471297 DAXXQ9UER7 740 aaPredicted RBP8.71□□□□□ -1.02
SMNDC1-204ENST00000471297 INO80Q9ULG1 1556 aaPredicted RBP8.7□□□□□ -1.02
SMNDC1-204ENST00000471297 CLCN1P35523 988 aa8.7□□□□□ -1.02
SMNDC1-204ENST00000471297 NEUROD2Q15784 382 aa8.7□□□□□ -1.02
SMNDC1-204ENST00000471297 GPCPD1Q9NPB8 672 aa8.7□□□□□ -1.02
SMNDC1-204ENST00000471297 UNC13BO14795 1591 aa8.69□□□□□ -1.02
SMNDC1-204ENST00000471297 KDM5CP41229 1560 aa8.69□□□□□ -1.02
SMNDC1-204ENST00000471297 BRPF1P55201 1214 aaPredicted RBP8.69□□□□□ -1.02
SMNDC1-204ENST00000471297 SWT1Q5T5J6 900 aaKnown RBP8.69□□□□□ -1.02
SMNDC1-204ENST00000471297 SAMD7Q7Z3H4 446 aa8.69□□□□□ -1.02
SMNDC1-204ENST00000471297 TMUB1Q9BVT8 246 aa8.69□□□□□ -1.02
SMNDC1-204ENST00000471297 KANK1Q14678 1352 aa8.69□□□□□ -1.02
SMNDC1-204ENST00000471297 FAM135AQ9P2D6 1515 aa8.69□□□□□ -1.02
SMNDC1-204ENST00000471297 KIF3BO15066 747 aa8.68□□□□□ -1.02
SMNDC1-204ENST00000471297 RAPGEF3O95398 923 aa8.68□□□□□ -1.02
SMNDC1-204ENST00000471297 PARP9Q8IXQ6 854 aa8.68□□□□□ -1.02
SMNDC1-204ENST00000471297 GPBP1L1Q9HC44 474 aaPredicted RBP8.68□□□□□ -1.02
SMNDC1-204ENST00000471297 A2MP01023 1474 aa8.68□□□□□ -1.02
SMNDC1-204ENST00000471297 MAGI2Q86UL8 1455 aa8.68□□□□□ -1.02
SMNDC1-204ENST00000471297 SSTR3P32745 418 aaPredicted RBP8.67□□□□□ -1.02
SMNDC1-204ENST00000471297 RPRD2Q5VT52 1461 aaKnown RBP8.67□□□□□ -1.02
SMNDC1-204ENST00000471297 WNT2BQ93097 391 aa8.67□□□□□ -1.02
SMNDC1-204ENST00000471297 KIDINS220Q9ULH0 1771 aa8.66□□□□□ -1.02
SMNDC1-204ENST00000471297 EIF2AK4Q9P2K8 1649 aaKnown RBP8.66□□□□□ -1.02
SMNDC1-204ENST00000471297 HECW2Q9P2P5 1572 aa8.66□□□□□ -1.02
SMNDC1-204ENST00000471297 GIGYF2Q6Y7W6 1299 aaKnown RBP8.66□□□□□ -1.02
SMNDC1-204ENST00000471297 KDM4CQ9H3R0 1056 aa8.66□□□□□ -1.02
SMNDC1-204ENST00000471297 IQGAP3Q86VI3 1631 aa8.65□□□□□ -1.02
SMNDC1-204ENST00000471297 DDX11L8A8MPP1 907 aa8.65□□□□□ -1.02
SMNDC1-204ENST00000471297 ANKK1Q8NFD2 765 aa8.65□□□□□ -1.02
SMNDC1-204ENST00000471297 FAM217BQ9NTX9 383 aaPredicted RBP8.65□□□□□ -1.02
SMNDC1-204ENST00000471297 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.65□□□□□ -1.02
SMNDC1-204ENST00000471297 SLC4A3P48751 1232 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms