RNA–Protein interactions for RNA: ENST00000471161.1

TMEM139-206, Transcript of transmembrane protein 139, humanhuman

TSL 1 (best)

Gene TMEM139, Length 1,724 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-206ENST00000471161 ADGRL3Q9HAR2 1447 aa17.47■□□□□ 0.39
TMEM139-206ENST00000471161 USP6P35125 1406 aa17.47■□□□□ 0.39
TMEM139-206ENST00000471161 STRCP1A6NGW2 1772 aa17.46■□□□□ 0.39
TMEM139-206ENST00000471161 SALL2Q9Y467 1007 aaPredicted RBP17.45■□□□□ 0.38
TMEM139-206ENST00000471161 MAP2P11137 1827 aaKnown RBP17.45■□□□□ 0.38
TMEM139-206ENST00000471161 STRCQ7RTU9 1775 aa17.45■□□□□ 0.38
TMEM139-206ENST00000471161 TTC21BQ7Z4L5 1316 aa17.44■□□□□ 0.38
TMEM139-206ENST00000471161 SSH2Q76I76 1423 aa17.44■□□□□ 0.38
TMEM139-206ENST00000471161 FBLN1P23142 703 aa17.44■□□□□ 0.38
TMEM139-206ENST00000471161 COL3A1P02461 1466 aaPredicted RBP17.43■□□□□ 0.38
TMEM139-206ENST00000471161 CFAP53Q96M91 514 aa17.42■□□□□ 0.38
TMEM139-206ENST00000471161 PROSER2Q86WR7 435 aaPredicted RBP17.41■□□□□ 0.38
TMEM139-206ENST00000471161 CCDC146Q8IYE0 955 aa17.41■□□□□ 0.38
TMEM139-206ENST00000471161 NGDNQ8NEJ9 315 aaKnown RBP17.41■□□□□ 0.38
TMEM139-206ENST00000471161 COG3Q96JB2 828 aa17.4■□□□□ 0.38
TMEM139-206ENST00000471161 POLKQ9UBT6 870 aa17.4■□□□□ 0.38
TMEM139-206ENST00000471161 SMG6Q86US8 1419 aaKnown RBP17.39■□□□□ 0.37
TMEM139-206ENST00000471161 C14orf37Q86TY3 774 aa17.39■□□□□ 0.37
TMEM139-206ENST00000471161 OVOS2A0A0J9YW53 1432 aa17.39■□□□□ 0.37
TMEM139-206ENST00000471161 OVOS2Q6IE36 1432 aa17.39■□□□□ 0.37
TMEM139-206ENST00000471161 PNPLA6Q8IY17 1366 aa17.38■□□□□ 0.37
TMEM139-206ENST00000471161 NUDCQ9Y266 331 aa17.37■□□□□ 0.37
TMEM139-206ENST00000471161 PIK3C2AO00443 1686 aa17.37■□□□□ 0.37
TMEM139-206ENST00000471161 AATKQ6ZMQ8 1374 aa17.37■□□□□ 0.37
TMEM139-206ENST00000471161 PHF8Q9UPP1 1060 aa17.36■□□□□ 0.37
TMEM139-206ENST00000471161 EMILIN1Q9Y6C2 1016 aa17.36■□□□□ 0.37
TMEM139-206ENST00000471161 TTC21AQ8NDW8 1320 aa17.36■□□□□ 0.37
TMEM139-206ENST00000471161 APAF1O14727 1248 aa17.35■□□□□ 0.37
TMEM139-206ENST00000471161 SUPT16HQ9Y5B9 1047 aaKnown RBP17.35■□□□□ 0.37
TMEM139-206ENST00000471161 TMEM94Q12767 1356 aa17.35■□□□□ 0.37
TMEM139-206ENST00000471161 PPM1GO15355 546 aaPredicted RBP17.34■□□□□ 0.37
TMEM139-206ENST00000471161 CDCA7LQ96GN5 454 aa17.34■□□□□ 0.37
TMEM139-206ENST00000471161 MARF1Q9Y4F3 1742 aaKnown RBP17.33■□□□□ 0.37
TMEM139-206ENST00000471161 U2AF1L5P0DN76 240 aaPredicted RBP17.33■□□□□ 0.37
TMEM139-206ENST00000471161 U2AF1Q01081 240 aaKnown RBP eCLIP17.33■□□□□ 0.37
TMEM139-206ENST00000471161 PDE3BQ13370 1112 aa17.33■□□□□ 0.37
TMEM139-206ENST00000471161 RRS1Q15050 365 aaKnown RBP17.33■□□□□ 0.37
TMEM139-206ENST00000471161 ESCO1Q5FWF5 840 aa17.33■□□□□ 0.37
TMEM139-206ENST00000471161 USP31Q70CQ4 1352 aa17.33■□□□□ 0.36
TMEM139-206ENST00000471161 ZNF521Q96K83 1311 aa17.33■□□□□ 0.36
TMEM139-206ENST00000471161 DIAPH1O60610 1272 aaKnown RBP17.33■□□□□ 0.36
TMEM139-206ENST00000471161 C19orf44Q9H6X5 657 aa17.33■□□□□ 0.36
TMEM139-206ENST00000471161 XIRP1Q702N8 1843 aaKnown RBP17.32■□□□□ 0.36
TMEM139-206ENST00000471161 CDK12Q9NYV4 1490 aaPredicted RBP17.32■□□□□ 0.36
TMEM139-206ENST00000471161 RUNDC1Q96C34 613 aa17.32■□□□□ 0.36
TMEM139-206ENST00000471161 ORAI2Q96SN7 254 aa17.32■□□□□ 0.36
TMEM139-206ENST00000471161 IQSEC2Q5JU85 1478 aa17.31■□□□□ 0.36
TMEM139-206ENST00000471161 U2SURPO15042 1029 aaKnown RBP17.31■□□□□ 0.36
TMEM139-206ENST00000471161 ILDR1Q86SU0 546 aaPredicted RBP17.31■□□□□ 0.36
TMEM139-206ENST00000471161 USP54Q70EL1 1684 aa17.31■□□□□ 0.36
TMEM139-206ENST00000471161 PEAK1Q9H792 1746 aa17.3■□□□□ 0.36
TMEM139-206ENST00000471161 C1orf167Q5SNV9 1468 aa17.3■□□□□ 0.36
TMEM139-206ENST00000471161 NCOA3Q9Y6Q9 1424 aa17.29■□□□□ 0.36
TMEM139-206ENST00000471161 FKBP8Q14318 412 aa17.29■□□□□ 0.36
TMEM139-206ENST00000471161 TCP11L2Q8N4U5 519 aa17.28■□□□□ 0.36
TMEM139-206ENST00000471161 MST1RQ04912 1400 aa17.27■□□□□ 0.36
TMEM139-206ENST00000471161 SOX12O15370 315 aa17.27■□□□□ 0.36
TMEM139-206ENST00000471161 PAK3O75914 559 aaPredicted RBP17.27■□□□□ 0.36
TMEM139-206ENST00000471161 IL13P35225 146 aa17.27■□□□□ 0.36
TMEM139-206ENST00000471161 NLRP6P59044 892 aa17.27■□□□□ 0.36
TMEM139-206ENST00000471161 NUTM2GQ5VZR2 741 aa17.27■□□□□ 0.36
TMEM139-206ENST00000471161 ZNF335Q9H4Z2 1342 aaPredicted RBP17.27■□□□□ 0.36
TMEM139-206ENST00000471161 DCCP43146 1447 aa17.27■□□□□ 0.35
TMEM139-206ENST00000471161 PLEKHF1Q96S99 279 aa17.27■□□□□ 0.35
TMEM139-206ENST00000471161 RRP7AQ9Y3A4 280 aaKnown RBP17.27■□□□□ 0.35
TMEM139-206ENST00000471161 KIF1AQ12756 1690 aa17.26■□□□□ 0.35
TMEM139-206ENST00000471161 PSME1Q06323 249 aa17.26■□□□□ 0.35
TMEM139-206ENST00000471161 ABTB2Q8N961 1025 aa17.26■□□□□ 0.35
TMEM139-206ENST00000471161 FOXO3O43524 673 aa17.25■□□□□ 0.35
TMEM139-206ENST00000471161 NEFLP07196 543 aa17.25■□□□□ 0.35
TMEM139-206ENST00000471161 ATF3P18847 181 aa17.25■□□□□ 0.35
TMEM139-206ENST00000471161 LRRC7Q96NW7 1537 aa17.25■□□□□ 0.35
TMEM139-206ENST00000471161 NGEFQ8N5V2 710 aa17.24■□□□□ 0.35
TMEM139-206ENST00000471161 DMRT2Q9Y5R5 561 aa17.24■□□□□ 0.35
TMEM139-206ENST00000471161 XPCQ01831 940 aaPredicted RBP17.24■□□□□ 0.35
TMEM139-206ENST00000471161 GOLGA2Q08379 1002 aa17.24■□□□□ 0.35
TMEM139-206ENST00000471161 NEUROD2Q15784 382 aa17.24■□□□□ 0.35
TMEM139-206ENST00000471161 TRPM3Q9HCF6 1732 aaPredicted RBP17.24■□□□□ 0.35
TMEM139-206ENST00000471161 MAP3K19Q56UN5 1328 aa17.23■□□□□ 0.35
TMEM139-206ENST00000471161 SPINK5Q9NQ38 1064 aaPredicted RBP17.23■□□□□ 0.35
TMEM139-206ENST00000471161 IRX6P78412 446 aaPredicted RBP17.22■□□□□ 0.35
TMEM139-206ENST00000471161 SLFN5Q08AF3 891 aa17.22■□□□□ 0.35
TMEM139-206ENST00000471161 DUSP27Q5VZP5 1158 aa17.22■□□□□ 0.35
TMEM139-206ENST00000471161 WWC1Q8IX03 1113 aa17.22■□□□□ 0.35
TMEM139-206ENST00000471161 RSPH6AQ9H0K4 717 aa17.22■□□□□ 0.35
TMEM139-206ENST00000471161 MSH6P52701 1360 aa17.22■□□□□ 0.35
TMEM139-206ENST00000471161 HSP90AB2PQ58FF8 381 aa17.21■□□□□ 0.35
TMEM139-206ENST00000471161 FCHSD2O94868 740 aa17.21■□□□□ 0.35
TMEM139-206ENST00000471161 HMOX1P09601 288 aa17.21■□□□□ 0.35
TMEM139-206ENST00000471161 EIF4A2Q14240 407 aaKnown RBP17.21■□□□□ 0.35
TMEM139-206ENST00000471161 CADPS2Q86UW7 1296 aa17.21■□□□□ 0.35
TMEM139-206ENST00000471161 RNF123Q5XPI4 1314 aa17.2■□□□□ 0.34
TMEM139-206ENST00000471161 TRMT2AQ8IZ69 625 aaKnown RBP17.2■□□□□ 0.34
TMEM139-206ENST00000471161 SBNO1A3KN83 1393 aa17.2■□□□□ 0.34
TMEM139-206ENST00000471161 RGPD1P0DJD0 1748 aa17.19■□□□□ 0.34
TMEM139-206ENST00000471161 PRKAR2BP31323 418 aa17.19■□□□□ 0.34
TMEM139-206ENST00000471161 KRT28Q7Z3Y7 464 aa17.19■□□□□ 0.34
TMEM139-206ENST00000471161 LTN1O94822 1766 aa17.19■□□□□ 0.34
TMEM139-206ENST00000471161 TMPOP42166 694 aaKnown RBP17.18■□□□□ 0.34
TMEM139-206ENST00000471161 CCDC27Q2M243 656 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms