RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 C6orf229H3BNL8 230 aa10.65□□□□□ -0.7
GPNMB-208ENST00000470994 SIAH2O43255 324 aa10.65□□□□□ -0.7
GPNMB-208ENST00000470994 SYMPKQ92797 1274 aaKnown RBP10.65□□□□□ -0.7
GPNMB-208ENST00000470994 FDX1P10109 184 aa10.64□□□□□ -0.71
GPNMB-208ENST00000470994 BMP1P13497 986 aa10.64□□□□□ -0.71
GPNMB-208ENST00000470994 CFTRP13569 1480 aa10.63□□□□□ -0.71
GPNMB-208ENST00000470994 HAP1P54257 671 aaPredicted RBP10.63□□□□□ -0.71
GPNMB-208ENST00000470994 PLEKHG3A1L390 1219 aa10.62□□□□□ -0.71
GPNMB-208ENST00000470994 PTPRNQ16849 979 aa10.62□□□□□ -0.71
GPNMB-208ENST00000470994 PTCRAQ6ISU1 281 aaPredicted RBP10.62□□□□□ -0.71
GPNMB-208ENST00000470994 TRIM46Q7Z4K8 759 aa10.62□□□□□ -0.71
GPNMB-208ENST00000470994 SH3BP2P78314 561 aa10.61□□□□□ -0.71
GPNMB-208ENST00000470994 WDR62O43379 1518 aa10.61□□□□□ -0.71
GPNMB-208ENST00000470994 GMPRP36959 345 aa10.6□□□□□ -0.71
GPNMB-208ENST00000470994 ZSCAN1Q8NBB4 408 aa10.6□□□□□ -0.71
GPNMB-208ENST00000470994 UNC93B1Q9H1C4 597 aa10.59□□□□□ -0.71
GPNMB-208ENST00000470994 H3BM21 787 aa10.58□□□□□ -0.72
GPNMB-208ENST00000470994 TOP2AP11388 1531 aaKnown RBP10.58□□□□□ -0.72
GPNMB-208ENST00000470994 VARSP26640 1264 aaKnown RBP10.57□□□□□ -0.72
GPNMB-208ENST00000470994 SCARF1Q14162 830 aa10.57□□□□□ -0.72
GPNMB-208ENST00000470994 EVA1BQ9NVM1 165 aa10.57□□□□□ -0.72
GPNMB-208ENST00000470994 SPDYE5A6NIY4 337 aa10.56□□□□□ -0.72
GPNMB-208ENST00000470994 PCDHGC3Q9UN70 934 aa10.56□□□□□ -0.72
GPNMB-208ENST00000470994 URB2Q14146 1524 aaKnown RBP10.55□□□□□ -0.72
GPNMB-208ENST00000470994 KCNH2Q12809 1159 aa10.55□□□□□ -0.72
GPNMB-208ENST00000470994 LINC01559Q495D7 138 aa10.55□□□□□ -0.72
GPNMB-208ENST00000470994 MPNDQ8N594 471 aa10.55□□□□□ -0.72
GPNMB-208ENST00000470994 ZFP42Q96MM3 310 aa10.55□□□□□ -0.72
GPNMB-208ENST00000470994 TLL2Q9Y6L7 1015 aa10.55□□□□□ -0.72
GPNMB-208ENST00000470994 NNTQ13423 1086 aa10.54□□□□□ -0.72
GPNMB-208ENST00000470994 DESI1Q6ICB0 168 aa10.54□□□□□ -0.72
GPNMB-208ENST00000470994 ZNF511Q8NB15 262 aa10.54□□□□□ -0.72
GPNMB-208ENST00000470994 CCDC88BA6NC98 1476 aa10.54□□□□□ -0.72
GPNMB-208ENST00000470994 VEGFBP49765 207 aa10.53□□□□□ -0.72
GPNMB-208ENST00000470994 PRR7Q8TB68 274 aa10.53□□□□□ -0.72
GPNMB-208ENST00000470994 BAP1Q92560 729 aa10.53□□□□□ -0.72
GPNMB-208ENST00000470994 ADH1CP00326 375 aa10.52□□□□□ -0.73
GPNMB-208ENST00000470994 SSTR3P32745 418 aaPredicted RBP10.52□□□□□ -0.73
GPNMB-208ENST00000470994 MTMR2Q13614 643 aa10.52□□□□□ -0.73
GPNMB-208ENST00000470994 MRPL14Q6P1L8 145 aaKnown RBP10.52□□□□□ -0.73
GPNMB-208ENST00000470994 SPIRE2Q8WWL2 714 aa10.52□□□□□ -0.73
GPNMB-208ENST00000470994 TTLL12Q14166 644 aaPredicted RBP10.51□□□□□ -0.73
GPNMB-208ENST00000470994 FAM174AQ8TBP5 190 aa10.51□□□□□ -0.73
GPNMB-208ENST00000470994 KDM2AQ9Y2K7 1162 aa10.51□□□□□ -0.73
GPNMB-208ENST00000470994 WDR4P57081 412 aaKnown RBP10.49□□□□□ -0.73
GPNMB-208ENST00000470994 MOXD2PA6NHM9 499 aa10.48□□□□□ -0.73
GPNMB-208ENST00000470994 NDUFV2P19404 249 aa10.48□□□□□ -0.73
GPNMB-208ENST00000470994 CTHP32929 405 aa10.48□□□□□ -0.73
GPNMB-208ENST00000470994 ERBB4Q15303 1308 aa10.48□□□□□ -0.73
GPNMB-208ENST00000470994 TIMP2P16035 220 aa10.47□□□□□ -0.73
GPNMB-208ENST00000470994 DIXDC1Q155Q3 683 aa10.47□□□□□ -0.73
GPNMB-208ENST00000470994 PURBQ96QR8 312 aaKnown RBP10.47□□□□□ -0.73
GPNMB-208ENST00000470994 ZNF608Q9ULD9 1512 aaPredicted RBP10.47□□□□□ -0.73
GPNMB-208ENST00000470994 IFT140Q96RY7 1462 aa10.46□□□□□ -0.74
GPNMB-208ENST00000470994 LORP23490 312 aaPredicted RBP10.45□□□□□ -0.74
GPNMB-208ENST00000470994 GJA5P36382 358 aa10.45□□□□□ -0.74
GPNMB-208ENST00000470994 CYB5RLQ6IPT4 315 aa10.45□□□□□ -0.74
GPNMB-208ENST00000470994 VSIG8P0DPA2 414 aa10.44□□□□□ -0.74
GPNMB-208ENST00000470994 TOPBP1Q92547 1522 aa10.43□□□□□ -0.74
GPNMB-208ENST00000470994 VSIG10Q8N0Z9 540 aa10.43□□□□□ -0.74
GPNMB-208ENST00000470994 MAN1A2O60476 641 aa10.42□□□□□ -0.74
GPNMB-208ENST00000470994 UPP2O95045 317 aa10.42□□□□□ -0.74
GPNMB-208ENST00000470994 LYPD8Q6UX82 237 aa10.42□□□□□ -0.74
GPNMB-208ENST00000470994 AQRO60306 1485 aaKnown RBP eCLIP10.42□□□□□ -0.74
GPNMB-208ENST00000470994 SUPT5HO00267 1087 aaKnown RBP10.41□□□□□ -0.74
GPNMB-208ENST00000470994 NR5A1Q13285 461 aa10.41□□□□□ -0.74
GPNMB-208ENST00000470994 ARID5BQ14865 1188 aa10.41□□□□□ -0.74
GPNMB-208ENST00000470994 AMHR2Q16671 573 aa10.41□□□□□ -0.74
GPNMB-208ENST00000470994 CDK15Q96Q40 435 aa10.41□□□□□ -0.74
GPNMB-208ENST00000470994 BEGAINQ9BUH8 593 aa10.41□□□□□ -0.74
GPNMB-208ENST00000470994 ABCC8Q09428 1581 aa10.4□□□□□ -0.74
GPNMB-208ENST00000470994 AGERQ15109 404 aa10.4□□□□□ -0.74
GPNMB-208ENST00000470994 GIGYF2Q6Y7W6 1299 aaKnown RBP10.4□□□□□ -0.74
GPNMB-208ENST00000470994 TDRD9Q8NDG6 1382 aaKnown RBP10.39□□□□□ -0.75
GPNMB-208ENST00000470994 ZIC2O95409 532 aaPredicted RBP10.39□□□□□ -0.75
GPNMB-208ENST00000470994 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.39□□□□□ -0.75
GPNMB-208ENST00000470994 KLF16Q9BXK1 252 aaPredicted RBP10.39□□□□□ -0.75
GPNMB-208ENST00000470994 ZBTB3Q9H5J0 574 aa10.39□□□□□ -0.75
GPNMB-208ENST00000470994 RSBN1LQ6PCB5 846 aaPredicted RBP10.38□□□□□ -0.75
GPNMB-208ENST00000470994 BPHLQ86WA6 291 aaPredicted RBP10.38□□□□□ -0.75
GPNMB-208ENST00000470994 SOBPA7XYQ1 873 aa10.37□□□□□ -0.75
GPNMB-208ENST00000470994 SPTLC1O15269 473 aa10.37□□□□□ -0.75
GPNMB-208ENST00000470994 SOGA1O94964 1423 aa10.37□□□□□ -0.75
GPNMB-208ENST00000470994 C6orf118Q5T5N4 469 aa10.37□□□□□ -0.75
GPNMB-208ENST00000470994 CHMP7Q8WUX9 453 aaPredicted RBP10.37□□□□□ -0.75
GPNMB-208ENST00000470994 TBC1D2Q9BYX2 928 aa10.37□□□□□ -0.75
GPNMB-208ENST00000470994 BARGINQ6ZT62 677 aa10.36□□□□□ -0.75
GPNMB-208ENST00000470994 FOXJ1Q92949 421 aa10.36□□□□□ -0.75
GPNMB-208ENST00000470994 ITPKCQ96DU7 683 aa10.36□□□□□ -0.75
GPNMB-208ENST00000470994 RAD54L2Q9Y4B4 1467 aa10.36□□□□□ -0.75
GPNMB-208ENST00000470994 BMP2P12643 396 aa10.35□□□□□ -0.75
GPNMB-208ENST00000470994 ZFAND3Q9H8U3 227 aa10.35□□□□□ -0.75
GPNMB-208ENST00000470994 MAP10Q9P2G4 905 aa10.35□□□□□ -0.75
GPNMB-208ENST00000470994 CFAP99D6REC4 459 aa10.34□□□□□ -0.75
GPNMB-208ENST00000470994 F12P00748 615 aaPredicted RBP10.34□□□□□ -0.75
GPNMB-208ENST00000470994 PRPF38BQ5VTL8 546 aaKnown RBP10.34□□□□□ -0.75
GPNMB-208ENST00000470994 ARMC2Q8NEN0 867 aa10.34□□□□□ -0.75
GPNMB-208ENST00000470994 DNMBPQ6XZF7 1577 aa10.34□□□□□ -0.75
GPNMB-208ENST00000470994 LINC00528Q8N1L1 170 aa10.33□□□□□ -0.76
GPNMB-208ENST00000470994 POLA1P09884 1462 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms