RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 NHSL1Q5SYE7 1610 aa39.57■■■■□ 3.93
SOD1-203ENST00000470944 AMER1Q5JTC6 1135 aaPredicted RBP39.57■■■■□ 3.92
SOD1-203ENST00000470944 PAK3O75914 559 aaPredicted RBP39.56■■■■□ 3.92
SOD1-203ENST00000470944 CNGB1Q14028 1251 aaPredicted RBP39.55■■■■□ 3.92
SOD1-203ENST00000470944 SOS2Q07890 1332 aaPredicted RBP39.54■■■■□ 3.92
SOD1-203ENST00000470944 NME9Q86XW9 330 aa39.54■■■■□ 3.92
SOD1-203ENST00000470944 TRPM3Q9HCF6 1732 aaPredicted RBP39.53■■■■□ 3.92
SOD1-203ENST00000470944 CGNL1Q0VF96 1302 aa39.53■■■■□ 3.92
SOD1-203ENST00000470944 DIEXFQ68CQ4 756 aaKnown RBP39.53■■■■□ 3.92
SOD1-203ENST00000470944 FYB1O15117 783 aa39.51■■■■□ 3.92
SOD1-203ENST00000470944 AHDC1Q5TGY3 1603 aaPredicted RBP39.51■■■■□ 3.92
SOD1-203ENST00000470944 BRD4O60885 1362 aaPredicted RBP39.51■■■■□ 3.91
SOD1-203ENST00000470944 ZRANB1Q9UGI0 708 aa39.5■■■■□ 3.91
SOD1-203ENST00000470944 CC2D1BQ5T0F9 858 aaKnown RBP39.49■■■■□ 3.91
SOD1-203ENST00000470944 TTC21AQ8NDW8 1320 aa39.49■■■■□ 3.91
SOD1-203ENST00000470944 GGNBP2Q9H3C7 697 aa39.48■■■■□ 3.91
SOD1-203ENST00000470944 SBNO1A3KN83 1393 aa39.46■■■■□ 3.91
SOD1-203ENST00000470944 PIK3C2AO00443 1686 aa39.45■■■■□ 3.91
SOD1-203ENST00000470944 ABTB2Q8N961 1025 aa39.45■■■■□ 3.91
SOD1-203ENST00000470944 NUTM2GQ5VZR2 741 aa39.44■■■■□ 3.9
SOD1-203ENST00000470944 SPATA31A3Q5VYP0 1347 aa39.43■■■■□ 3.9
SOD1-203ENST00000470944 NPC1L1Q9UHC9 1359 aa39.43■■■■□ 3.9
SOD1-203ENST00000470944 LMOD2Q6P5Q4 547 aa39.43■■■■□ 3.9
SOD1-203ENST00000470944 TNS3Q68CZ2 1445 aa39.42■■■■□ 3.9
SOD1-203ENST00000470944 KIF20BQ96Q89 1820 aa39.41■■■■□ 3.9
SOD1-203ENST00000470944 ALS2Q96Q42 1657 aa39.4■■■■□ 3.9
SOD1-203ENST00000470944 PHLPP1O60346 1717 aa39.39■■■■□ 3.9
SOD1-203ENST00000470944 NSD2O96028 1365 aa39.38■■■■□ 3.89
SOD1-203ENST00000470944 COL16A1Q07092 1604 aaPredicted RBP39.38■■■■□ 3.89
SOD1-203ENST00000470944 NLRP6P59044 892 aa39.37■■■■□ 3.89
SOD1-203ENST00000470944 OVOS2A0A0J9YW53 1432 aa39.36■■■■□ 3.89
SOD1-203ENST00000470944 OVOS2Q6IE36 1432 aa39.36■■■■□ 3.89
SOD1-203ENST00000470944 USP31Q70CQ4 1352 aa39.35■■■■□ 3.89
SOD1-203ENST00000470944 COG3Q96JB2 828 aa39.34■■■■□ 3.89
SOD1-203ENST00000470944 LRRC59Q96AG4 307 aaKnown RBP39.33■■■■□ 3.89
SOD1-203ENST00000470944 PLEKHG5O94827 1062 aa39.32■■■■□ 3.89
SOD1-203ENST00000470944 MORC1Q86VD1 984 aa39.31■■■■□ 3.88
SOD1-203ENST00000470944 PRKRIP1Q9H875 184 aaPredicted RBP39.31■■■■□ 3.88
SOD1-203ENST00000470944 MARF1Q9Y4F3 1742 aaKnown RBP39.31■■■■□ 3.88
SOD1-203ENST00000470944 ARHGEF10O15013 1369 aa39.3■■■■□ 3.88
SOD1-203ENST00000470944 PARD3Q8TEW0 1356 aa39.3■■■■□ 3.88
SOD1-203ENST00000470944 ANKRD26Q9UPS8 1709 aa39.29■■■■□ 3.88
SOD1-203ENST00000470944 ANP32CO43423 234 aa39.28■■■■□ 3.88
SOD1-203ENST00000470944 HSPA1LP34931 641 aa39.28■■■■□ 3.88
SOD1-203ENST00000470944 TNNT2P45379 298 aaPredicted RBP39.28■■■■□ 3.88
SOD1-203ENST00000470944 NLRP13Q86W25 1043 aa39.28■■■■□ 3.88
SOD1-203ENST00000470944 FBLN1P23142 703 aa39.26■■■■□ 3.88
SOD1-203ENST00000470944 USP54Q70EL1 1684 aa39.26■■■■□ 3.88
SOD1-203ENST00000470944 CABLES1Q8TDN4 633 aa39.25■■■■□ 3.87
SOD1-203ENST00000470944 MED1Q15648 1581 aaPredicted RBP39.25■■■■□ 3.87
SOD1-203ENST00000470944 USP19O94966 1318 aa39.24■■■■□ 3.87
SOD1-203ENST00000470944 SOX12O15370 315 aa39.23■■■■□ 3.87
SOD1-203ENST00000470944 PNPLA6Q8IY17 1366 aa39.22■■■■□ 3.87
SOD1-203ENST00000470944 RALBP1Q15311 655 aa39.22■■■■□ 3.87
SOD1-203ENST00000470944 SLIT3O75094 1523 aa39.18■■■■□ 3.86
SOD1-203ENST00000470944 FBXO41Q8TF61 875 aa39.17■■■■□ 3.86
SOD1-203ENST00000470944 GCP02774 474 aa39.16■■■■□ 3.86
SOD1-203ENST00000470944 CRYBG1Q9Y4K1 1723 aa39.15■■■■□ 3.86
SOD1-203ENST00000470944 MIER1Q8N108 512 aa39.15■■■■□ 3.86
SOD1-203ENST00000470944 PPP2R1AP30153 589 aa39.14■■■■□ 3.86
SOD1-203ENST00000470944 PHRF1Q9P1Y6 1649 aaKnown RBP39.13■■■■□ 3.85
SOD1-203ENST00000470944 NFAT5O94916 1531 aa39.12■■■■□ 3.85
SOD1-203ENST00000470944 COL22A1Q8NFW1 1626 aaPredicted RBP39.12■■■■□ 3.85
SOD1-203ENST00000470944 RRS1Q15050 365 aaKnown RBP39.11■■■■□ 3.85
SOD1-203ENST00000470944 KCNH5Q8NCM2 988 aa39.11■■■■□ 3.85
SOD1-203ENST00000470944 AATKQ6ZMQ8 1374 aa39.1■■■■□ 3.85
SOD1-203ENST00000470944 JCADQ9P266 1359 aa39.1■■■■□ 3.85
SOD1-203ENST00000470944 MYBBP1AQ9BQG0 1328 aaKnown RBP39.1■■■■□ 3.85
SOD1-203ENST00000470944 ABCA3Q99758 1704 aa39.08■■■■□ 3.85
SOD1-203ENST00000470944 POLKQ9UBT6 870 aa39.08■■■■□ 3.85
SOD1-203ENST00000470944 EMILIN1Q9Y6C2 1016 aa39.07■■■■□ 3.85
SOD1-203ENST00000470944 SHPRHQ149N8 1683 aa39.06■■■■□ 3.84
SOD1-203ENST00000470944 ZC3H6P61129 1189 aaKnown RBP39.05■■■■□ 3.84
SOD1-203ENST00000470944 MAP3K19Q56UN5 1328 aa39.05■■■■□ 3.84
SOD1-203ENST00000470944 HAP1P54257 671 aaPredicted RBP39.04■■■■□ 3.84
SOD1-203ENST00000470944 MTHFSP49914 203 aa39.03■■■■□ 3.84
SOD1-203ENST00000470944 PPM1GO15355 546 aaPredicted RBP39■■■■□ 3.83
SOD1-203ENST00000470944 ARHGEF25Q86VW2 580 aa39■■■■□ 3.83
SOD1-203ENST00000470944 MAP2P11137 1827 aaKnown RBP39■■■■□ 3.83
SOD1-203ENST00000470944 ZBTB7CA1YPR0 619 aa38.99■■■■□ 3.83
SOD1-203ENST00000470944 CCDC184Q52MB2 194 aa38.99■■■■□ 3.83
SOD1-203ENST00000470944 KIAA0232Q92628 1395 aa38.98■■■■□ 3.83
SOD1-203ENST00000470944 NUTM2BA6NNL0 878 aaPredicted RBP38.98■■■■□ 3.83
SOD1-203ENST00000470944 NUTM2EB1AL46 878 aaPredicted RBP38.98■■■■□ 3.83
SOD1-203ENST00000470944 NUTM2AQ8IVF1 878 aaPredicted RBP38.98■■■■□ 3.83
SOD1-203ENST00000470944 SMG6Q86US8 1419 aaKnown RBP38.98■■■■□ 3.83
SOD1-203ENST00000470944 PEAK1Q9H792 1746 aa38.96■■■■□ 3.83
SOD1-203ENST00000470944 CPDO75976 1380 aa38.95■■■■□ 3.83
SOD1-203ENST00000470944 LTN1O94822 1766 aa38.94■■■■□ 3.82
SOD1-203ENST00000470944 AMPHP49418 695 aa38.92■■■■□ 3.82
SOD1-203ENST00000470944 CHRNA2Q15822 529 aa38.92■■■■□ 3.82
SOD1-203ENST00000470944 SPATA31A6Q5VVP1 1343 aa38.91■■■■□ 3.82
SOD1-203ENST00000470944 ADAMTS2O95450 1211 aa38.91■■■■□ 3.82
SOD1-203ENST00000470944 PRDM11Q9NQV5 511 aa38.9■■■■□ 3.82
SOD1-203ENST00000470944 HOXC9P31274 260 aa38.89■■■■□ 3.82
SOD1-203ENST00000470944 HSP90AB2PQ58FF8 381 aa38.89■■■■□ 3.82
SOD1-203ENST00000470944 CDK12Q9NYV4 1490 aaPredicted RBP38.88■■■■□ 3.82
SOD1-203ENST00000470944 FLT4P35916 1363 aa38.88■■■■□ 3.81
SOD1-203ENST00000470944 LRP6O75581 1613 aa38.88■■■■□ 3.81
SOD1-203ENST00000470944 FAM83GA6ND36 823 aa38.87■■■■□ 3.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms