RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 SKIDA1Q1XH10 827 aa17.12■□□□□ 0.33
HDAC7-219ENST00000470668 BAG4O95429 457 aaKnown RBP17.11■□□□□ 0.33
HDAC7-219ENST00000470668 EVC2Q86UK5 1308 aa17.11■□□□□ 0.33
HDAC7-219ENST00000470668 GDPD2Q9HCC8 539 aa17.11■□□□□ 0.33
HDAC7-219ENST00000470668 SYNJ2O15056 1496 aa17.11■□□□□ 0.33
HDAC7-219ENST00000470668 FKBP5Q13451 457 aaPredicted RBP17.1■□□□□ 0.33
HDAC7-219ENST00000470668 BBXQ8WY36 941 aaPredicted RBP17.1■□□□□ 0.33
HDAC7-219ENST00000470668 ZNF830Q96NB3 372 aaPredicted RBP17.1■□□□□ 0.33
HDAC7-219ENST00000470668 LRPPRCP42704 1394 aaKnown RBP17.1■□□□□ 0.33
HDAC7-219ENST00000470668 PES1O00541 588 aaKnown RBP17.1■□□□□ 0.33
HDAC7-219ENST00000470668 PCDHB15Q9Y5E8 787 aa17.1■□□□□ 0.33
HDAC7-219ENST00000470668 DYNC1I1O14576 645 aa17.09■□□□□ 0.33
HDAC7-219ENST00000470668 MAP3K1Q13233 1512 aa17.09■□□□□ 0.33
HDAC7-219ENST00000470668 IFT140Q96RY7 1462 aa17.09■□□□□ 0.33
HDAC7-219ENST00000470668 GNAI1P63096 354 aa17.09■□□□□ 0.33
HDAC7-219ENST00000470668 HECW1Q76N89 1606 aa17.08■□□□□ 0.33
HDAC7-219ENST00000470668 PTPN23Q9H3S7 1636 aa17.08■□□□□ 0.33
HDAC7-219ENST00000470668 UPF3BQ9BZI7 483 aaKnown RBP17.08■□□□□ 0.33
HDAC7-219ENST00000470668 HDGFP51858 240 aaKnown RBP17.08■□□□□ 0.32
HDAC7-219ENST00000470668 CCDC73Q6ZRK6 1079 aa17.08■□□□□ 0.32
HDAC7-219ENST00000470668 FILIP1Q7Z7B0 1213 aa17.08■□□□□ 0.32
HDAC7-219ENST00000470668 RUFY2Q8WXA3 655 aa17.08■□□□□ 0.32
HDAC7-219ENST00000470668 SDF4Q9BRK5 362 aa17.08■□□□□ 0.32
HDAC7-219ENST00000470668 SCAPERQ9BY12 1400 aa17.08■□□□□ 0.32
HDAC7-219ENST00000470668 MCM2P49736 904 aa17.07■□□□□ 0.32
HDAC7-219ENST00000470668 NGDNQ8NEJ9 315 aaKnown RBP17.07■□□□□ 0.32
HDAC7-219ENST00000470668 KIAA0586Q9BVV6 1533 aa17.07■□□□□ 0.32
HDAC7-219ENST00000470668 LETM1O95202 739 aaPredicted RBP17.07■□□□□ 0.32
HDAC7-219ENST00000470668 CCDC192P0DO97 292 aa17.07■□□□□ 0.32
HDAC7-219ENST00000470668 CEBPZQ03701 1054 aaKnown RBP17.07■□□□□ 0.32
HDAC7-219ENST00000470668 KLHL40Q2TBA0 621 aa17.07■□□□□ 0.32
HDAC7-219ENST00000470668 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.07■□□□□ 0.32
HDAC7-219ENST00000470668 IQGAP2Q13576 1575 aa17.07■□□□□ 0.32
HDAC7-219ENST00000470668 ERC2O15083 957 aa17.07■□□□□ 0.32
HDAC7-219ENST00000470668 AEBP1Q8IUX7 1158 aa17.07■□□□□ 0.32
HDAC7-219ENST00000470668 WDR63Q8IWG1 891 aa17.07■□□□□ 0.32
HDAC7-219ENST00000470668 NINLQ9Y2I6 1382 aa17.06■□□□□ 0.32
HDAC7-219ENST00000470668 SSH1Q8WYL5 1049 aa17.06■□□□□ 0.32
HDAC7-219ENST00000470668 WDR33Q9C0J8 1336 aaKnown RBP17.06■□□□□ 0.32
HDAC7-219ENST00000470668 EIF2S2P20042 333 aaKnown RBP17.05■□□□□ 0.32
HDAC7-219ENST00000470668 SETQ01105 290 aaPredicted RBP17.05■□□□□ 0.32
HDAC7-219ENST00000470668 RBM42Q9BTD8 480 aaKnown RBP17.05■□□□□ 0.32
HDAC7-219ENST00000470668 RAPGEF3O95398 923 aa17.05■□□□□ 0.32
HDAC7-219ENST00000470668 PRKAR2BP31323 418 aa17.05■□□□□ 0.32
HDAC7-219ENST00000470668 OFD1O75665 1012 aa17.04■□□□□ 0.32
HDAC7-219ENST00000470668 FAM177BA6PVY3 158 aa17.04■□□□□ 0.32
HDAC7-219ENST00000470668 ZSCAN23Q3MJ62 389 aa17.04■□□□□ 0.32
HDAC7-219ENST00000470668 HSP90B2PQ58FF3 399 aa17.04■□□□□ 0.32
HDAC7-219ENST00000470668 TWISTNBQ3B726 338 aaPredicted RBP17.04■□□□□ 0.32
HDAC7-219ENST00000470668 C16orf45Q96MC5 204 aaPredicted RBP17.04■□□□□ 0.32
HDAC7-219ENST00000470668 FAM177A1Q8N128 213 aaPredicted RBP17.03■□□□□ 0.32
HDAC7-219ENST00000470668 SMC2O95347 1197 aa17.03■□□□□ 0.32
HDAC7-219ENST00000470668 NKTRP30414 1462 aaKnown RBP17.03■□□□□ 0.32
HDAC7-219ENST00000470668 APPP05067 770 aa17.02■□□□□ 0.32
HDAC7-219ENST00000470668 AMPHP49418 695 aa17.02■□□□□ 0.32
HDAC7-219ENST00000470668 NOM1Q5C9Z4 860 aaKnown RBP17.02■□□□□ 0.32
HDAC7-219ENST00000470668 IFIT2P09913 472 aaKnown RBP17.02■□□□□ 0.32
HDAC7-219ENST00000470668 TNMDQ9H2S6 317 aa17.02■□□□□ 0.32
HDAC7-219ENST00000470668 ZNF330Q9Y3S2 320 aaPredicted RBP17.02■□□□□ 0.32
HDAC7-219ENST00000470668 TNNQ9UQP3 1299 aa17.02■□□□□ 0.31
HDAC7-219ENST00000470668 ERBINQ96RT1 1412 aa17.02■□□□□ 0.31
HDAC7-219ENST00000470668 ROCK1Q13464 1354 aa17.02■□□□□ 0.31
HDAC7-219ENST00000470668 CCDC34Q96HJ3 373 aa17.01■□□□□ 0.31
HDAC7-219ENST00000470668 PDILTQ8N807 584 aa17.01■□□□□ 0.31
HDAC7-219ENST00000470668 CWC15Q9P013 229 aaKnown RBP17.01■□□□□ 0.31
HDAC7-219ENST00000470668 ZKSCAN5Q9Y2L8 839 aa17.01■□□□□ 0.31
HDAC7-219ENST00000470668 THOC2Q8NI27 1593 aaKnown RBP17.01■□□□□ 0.31
HDAC7-219ENST00000470668 CAMSAP2Q08AD1 1489 aa17.01■□□□□ 0.31
HDAC7-219ENST00000470668 PRIM1P49642 420 aaKnown RBP17.01■□□□□ 0.31
HDAC7-219ENST00000470668 FERMT3Q86UX7 667 aa17.01■□□□□ 0.31
HDAC7-219ENST00000470668 FAM69CQ0P6D2 419 aa17.01■□□□□ 0.31
HDAC7-219ENST00000470668 CAMK4Q16566 473 aa17.01■□□□□ 0.31
HDAC7-219ENST00000470668 TTC12Q9H892 705 aaPredicted RBP17■□□□□ 0.31
HDAC7-219ENST00000470668 PDE4CQ08493 712 aa17■□□□□ 0.31
HDAC7-219ENST00000470668 TTLL5Q6EMB2 1281 aa17■□□□□ 0.31
HDAC7-219ENST00000470668 TOMM22Q9NS69 142 aa17■□□□□ 0.31
HDAC7-219ENST00000470668 SURF6O75683 361 aaKnown RBP17■□□□□ 0.31
HDAC7-219ENST00000470668 ADCY5O95622 1261 aa16.99■□□□□ 0.31
HDAC7-219ENST00000470668 TBC1D9Q6ZT07 1266 aa16.99■□□□□ 0.31
HDAC7-219ENST00000470668 MAP4K4O95819 1239 aaPredicted RBP16.99■□□□□ 0.31
HDAC7-219ENST00000470668 TRIM27P14373 513 aa16.99■□□□□ 0.31
HDAC7-219ENST00000470668 RASSF8Q8NHQ8 419 aa16.99■□□□□ 0.31
HDAC7-219ENST00000470668 COG3Q96JB2 828 aa16.99■□□□□ 0.31
HDAC7-219ENST00000470668 PATL2C9JE40 543 aaKnown RBP16.99■□□□□ 0.31
HDAC7-219ENST00000470668 RNF20Q5VTR2 975 aa16.99■□□□□ 0.31
HDAC7-219ENST00000470668 C9orf78Q9NZ63 289 aaPredicted RBP16.99■□□□□ 0.31
HDAC7-219ENST00000470668 SMARCA5O60264 1052 aaPredicted RBP16.98■□□□□ 0.31
HDAC7-219ENST00000470668 KINO60870 393 aaKnown RBP16.98■□□□□ 0.31
HDAC7-219ENST00000470668 HCLS1P14317 486 aaPredicted RBP16.98■□□□□ 0.31
HDAC7-219ENST00000470668 THUMPD2Q9BTF0 503 aaKnown RBP16.98■□□□□ 0.31
HDAC7-219ENST00000470668 MCM5P33992 734 aa16.98■□□□□ 0.31
HDAC7-219ENST00000470668 TAF3Q5VWG9 929 aa16.98■□□□□ 0.31
HDAC7-219ENST00000470668 RNF123Q5XPI4 1314 aa16.98■□□□□ 0.31
HDAC7-219ENST00000470668 HDAC5Q9UQL6 1122 aa16.97■□□□□ 0.31
HDAC7-219ENST00000470668 STK3Q13188 491 aa16.97■□□□□ 0.31
HDAC7-219ENST00000470668 LARP6Q9BRS8 491 aaKnown RBP16.97■□□□□ 0.31
HDAC7-219ENST00000470668 TNNT1P13805 278 aa16.96■□□□□ 0.31
HDAC7-219ENST00000470668 KRT85P78386 507 aa16.96■□□□□ 0.31
HDAC7-219ENST00000470668 TSPYL4Q9UJ04 414 aa16.96■□□□□ 0.31
HDAC7-219ENST00000470668 CPLX1O14810 134 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms