RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 SH3BP2P78314 561 aa9.36□□□□□ -0.91
ITGA6-209ENST00000470259 ZNF787Q6DD87 383 aa9.36□□□□□ -0.91
ITGA6-209ENST00000470259 MAP10Q9P2G4 905 aa9.36□□□□□ -0.91
ITGA6-209ENST00000470259 J3QL48 77 aa9.35□□□□□ -0.91
ITGA6-209ENST00000470259 ST8SIA5O15466 376 aa9.35□□□□□ -0.91
ITGA6-209ENST00000470259 PER1O15534 1290 aaPredicted RBP9.35□□□□□ -0.91
ITGA6-209ENST00000470259 SH3D19Q5HYK7 790 aa9.35□□□□□ -0.91
ITGA6-209ENST00000470259 ALDH1A1P00352 501 aa9.34□□□□□ -0.91
ITGA6-209ENST00000470259 SMPD1P17405 629 aa9.34□□□□□ -0.91
ITGA6-209ENST00000470259 PROCA1Q8NCQ7 364 aaPredicted RBP9.34□□□□□ -0.91
ITGA6-209ENST00000470259 PLEKHG3A1L390 1219 aa9.33□□□□□ -0.92
ITGA6-209ENST00000470259 ZNF511Q8NB15 262 aa9.33□□□□□ -0.92
ITGA6-209ENST00000470259 AXIN1O15169 862 aa9.32□□□□□ -0.92
ITGA6-209ENST00000470259 F12P00748 615 aaPredicted RBP9.32□□□□□ -0.92
ITGA6-209ENST00000470259 AAASQ9NRG9 546 aa9.32□□□□□ -0.92
ITGA6-209ENST00000470259 AVPP01185 164 aa9.31□□□□□ -0.92
ITGA6-209ENST00000470259 AGERQ15109 404 aa9.31□□□□□ -0.92
ITGA6-209ENST00000470259 IL27Q8NEV9 243 aa9.31□□□□□ -0.92
ITGA6-209ENST00000470259 WASF2Q9Y6W5 498 aa9.3□□□□□ -0.92
ITGA6-209ENST00000470259 SIAH2O43255 324 aa9.29□□□□□ -0.92
ITGA6-209ENST00000470259 VARSP26640 1264 aaKnown RBP9.29□□□□□ -0.92
ITGA6-209ENST00000470259 CTDSPL2Q05D32 466 aa9.29□□□□□ -0.92
ITGA6-209ENST00000470259 CTC1Q2NKJ3 1217 aa9.29□□□□□ -0.92
ITGA6-209ENST00000470259 CRIPAKQ8N1N5 446 aa9.28□□□□□ -0.92
ITGA6-209ENST00000470259 ARMC2Q8NEN0 867 aa9.28□□□□□ -0.92
ITGA6-209ENST00000470259 HPS1Q92902 700 aa9.28□□□□□ -0.92
ITGA6-209ENST00000470259 AP1G2O75843 785 aa9.27□□□□□ -0.93
ITGA6-209ENST00000470259 FOXJ1Q92949 421 aa9.27□□□□□ -0.93
ITGA6-209ENST00000470259 PCMTD1Q96MG8 357 aaPredicted RBP9.27□□□□□ -0.93
ITGA6-209ENST00000470259 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.27□□□□□ -0.93
ITGA6-209ENST00000470259 BRPF1P55201 1214 aaPredicted RBP9.26□□□□□ -0.93
ITGA6-209ENST00000470259 FAM174AQ8TBP5 190 aa9.26□□□□□ -0.93
ITGA6-209ENST00000470259 DACH1Q9UI36 760 aa9.26□□□□□ -0.93
ITGA6-209ENST00000470259 TLL2Q9Y6L7 1015 aa9.26□□□□□ -0.93
ITGA6-209ENST00000470259 POTECB2RU33 542 aa9.25□□□□□ -0.93
ITGA6-209ENST00000470259 SMCPP49901 116 aaPredicted RBP9.25□□□□□ -0.93
ITGA6-209ENST00000470259 ARID5BQ14865 1188 aa9.25□□□□□ -0.93
ITGA6-209ENST00000470259 BPHLQ86WA6 291 aaPredicted RBP9.25□□□□□ -0.93
ITGA6-209ENST00000470259 LRRN4Q8WUT4 740 aa9.25□□□□□ -0.93
ITGA6-209ENST00000470259 NBPF14Q5TI25 921 aa9.24□□□□□ -0.93
ITGA6-209ENST00000470259 FBXO31Q5XUX0 539 aaPredicted RBP9.24□□□□□ -0.93
ITGA6-209ENST00000470259 PPP2R2DQ66LE6 453 aa9.24□□□□□ -0.93
ITGA6-209ENST00000470259 MAGEB6P1A0A0J9YX57 407 aa9.21□□□□□ -0.94
ITGA6-209ENST00000470259 C11orf95C9JLR9 678 aaPredicted RBP9.21□□□□□ -0.94
ITGA6-209ENST00000470259 GOPCQ9HD26 462 aa9.21□□□□□ -0.94
ITGA6-209ENST00000470259 GMPR2Q9P2T1 348 aaKnown RBP9.21□□□□□ -0.94
ITGA6-209ENST00000470259 RFC5P40937 340 aa9.2□□□□□ -0.94
ITGA6-209ENST00000470259 NR6A1Q15406 480 aa9.2□□□□□ -0.94
ITGA6-209ENST00000470259 CARD14Q9BXL6 1004 aa9.2□□□□□ -0.94
ITGA6-209ENST00000470259 CAPN5O15484 640 aaPredicted RBP9.19□□□□□ -0.94
ITGA6-209ENST00000470259 NNTQ13423 1086 aa9.19□□□□□ -0.94
ITGA6-209ENST00000470259 C4orf48Q5BLP8 95 aa9.19□□□□□ -0.94
ITGA6-209ENST00000470259 MPNDQ8N594 471 aa9.19□□□□□ -0.94
ITGA6-209ENST00000470259 ATP13A2Q9NQ11 1180 aa9.19□□□□□ -0.94
ITGA6-209ENST00000470259 USP17L8P0C7I0 530 aa9.18□□□□□ -0.94
ITGA6-209ENST00000470259 GPKOWQ92917 476 aaPredicted RBP eCLIP9.18□□□□□ -0.94
ITGA6-209ENST00000470259 ADH1CP00326 375 aa9.17□□□□□ -0.94
ITGA6-209ENST00000470259 FKBPLQ9UIM3 349 aa9.17□□□□□ -0.94
ITGA6-209ENST00000470259 SH3BP5LQ7L8J4 393 aa9.16□□□□□ -0.94
ITGA6-209ENST00000470259 PNMA1Q8ND90 353 aa9.16□□□□□ -0.94
ITGA6-209ENST00000470259 ZNF775Q96BV0 537 aaPredicted RBP9.16□□□□□ -0.94
ITGA6-209ENST00000470259 SENP2Q9HC62 589 aa9.16□□□□□ -0.94
ITGA6-209ENST00000470259 WDR4P57081 412 aaKnown RBP9.15□□□□□ -0.94
ITGA6-209ENST00000470259 TMEM259Q4ZIN3 620 aa9.15□□□□□ -0.94
ITGA6-209ENST00000470259 PDXDC2PQ6P474 469 aa9.15□□□□□ -0.94
ITGA6-209ENST00000470259 VASH1Q7L8A9 365 aaPredicted RBP9.15□□□□□ -0.94
ITGA6-209ENST00000470259 SH3RF1Q7Z6J0 888 aa9.15□□□□□ -0.94
ITGA6-209ENST00000470259 CDK15Q96Q40 435 aa9.15□□□□□ -0.94
ITGA6-209ENST00000470259 ARHGAP9Q9BRR9 750 aa9.15□□□□□ -0.94
ITGA6-209ENST00000470259 PRKCSHP14314 528 aaPredicted RBP9.14□□□□□ -0.95
ITGA6-209ENST00000470259 ZBTB33Q86T24 672 aa9.14□□□□□ -0.95
ITGA6-209ENST00000470259 BMP1P13497 986 aa9.13□□□□□ -0.95
ITGA6-209ENST00000470259 NR5A1Q13285 461 aa9.13□□□□□ -0.95
ITGA6-209ENST00000470259 EPS8L1Q8TE68 723 aa9.13□□□□□ -0.95
ITGA6-209ENST00000470259 HMX1Q9NP08 348 aaPredicted RBP9.13□□□□□ -0.95
ITGA6-209ENST00000470259 ZC3H4Q9UPT8 1303 aaKnown RBP9.12□□□□□ -0.95
ITGA6-209ENST00000470259 PTK2Q05397 1052 aa9.12□□□□□ -0.95
ITGA6-209ENST00000470259 ERFEQ4G0M1 354 aa9.12□□□□□ -0.95
ITGA6-209ENST00000470259 C1QTNF2Q9BXJ5 285 aa9.12□□□□□ -0.95
ITGA6-209ENST00000470259 FSHRP23945 695 aa9.11□□□□□ -0.95
ITGA6-209ENST00000470259 KIFC2Q96AC6 838 aa9.11□□□□□ -0.95
ITGA6-209ENST00000470259 ZIC2O95409 532 aaPredicted RBP9.1□□□□□ -0.95
ITGA6-209ENST00000470259 NR3C2P08235 984 aa9.1□□□□□ -0.95
ITGA6-209ENST00000470259 SNRPBP14678 240 aaKnown RBP9.1□□□□□ -0.95
ITGA6-209ENST00000470259 TIMP2P16035 220 aa9.1□□□□□ -0.95
ITGA6-209ENST00000470259 GRM5P41594 1212 aa9.1□□□□□ -0.95
ITGA6-209ENST00000470259 TRMT44Q8IYL2 757 aaKnown RBP9.1□□□□□ -0.95
ITGA6-209ENST00000470259 SLC10A4Q96EP9 437 aa9.1□□□□□ -0.95
ITGA6-209ENST00000470259 TRIM47Q96LD4 638 aa9.1□□□□□ -0.95
ITGA6-209ENST00000470259 SCARF1Q14162 830 aa9.09□□□□□ -0.95
ITGA6-209ENST00000470259 MAP4K5Q9Y4K4 846 aa9.09□□□□□ -0.95
ITGA6-209ENST00000470259 TRIM46Q7Z4K8 759 aa9.08□□□□□ -0.96
ITGA6-209ENST00000470259 ITPKCQ96DU7 683 aa9.08□□□□□ -0.96
ITGA6-209ENST00000470259 ZFAND3Q9H8U3 227 aa9.08□□□□□ -0.96
ITGA6-209ENST00000470259 ADAM32Q8TC27 787 aa9.07□□□□□ -0.96
ITGA6-209ENST00000470259 GPSM3Q9Y4H4 160 aa9.07□□□□□ -0.96
ITGA6-209ENST00000470259 MRPL14Q6P1L8 145 aaKnown RBP9.06□□□□□ -0.96
ITGA6-209ENST00000470259 CCDC116Q8IYX3 515 aa9.06□□□□□ -0.96
ITGA6-209ENST00000470259 KLF16Q9BXK1 252 aaPredicted RBP9.06□□□□□ -0.96
ITGA6-209ENST00000470259 CDV3Q9UKY7 258 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms