RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 RRAGDQ9NQL2 400 aaPredicted RBP16.63■□□□□ 0.25
SFXN3-205ENST00000470252 SSH1Q8WYL5 1049 aa16.62■□□□□ 0.25
SFXN3-205ENST00000470252 TMPOP42166 694 aaKnown RBP16.61■□□□□ 0.25
SFXN3-205ENST00000470252 NUTM2DQ5VT03 806 aaPredicted RBP16.61■□□□□ 0.25
SFXN3-205ENST00000470252 ATF7IPQ6VMQ6 1270 aa16.61■□□□□ 0.25
SFXN3-205ENST00000470252 CABP2Q9NPB3 220 aa16.61■□□□□ 0.25
SFXN3-205ENST00000470252 CD109Q6YHK3 1445 aa16.61■□□□□ 0.25
SFXN3-205ENST00000470252 XRCC6P12956 609 aaKnown RBP eCLIP16.61■□□□□ 0.25
SFXN3-205ENST00000470252 RPGRIP1LQ68CZ1 1315 aa16.6■□□□□ 0.25
SFXN3-205ENST00000470252 GGT6Q6P531 493 aa16.6■□□□□ 0.25
SFXN3-205ENST00000470252 NOB1Q9ULX3 412 aaKnown RBP16.6■□□□□ 0.25
SFXN3-205ENST00000470252 HSCBQ8IWL3 235 aa16.6■□□□□ 0.25
SFXN3-205ENST00000470252 PUS7Q96PZ0 661 aaKnown RBP16.6■□□□□ 0.25
SFXN3-205ENST00000470252 PLEKHF1Q96S99 279 aa16.6■□□□□ 0.25
SFXN3-205ENST00000470252 TRIM35Q9UPQ4 493 aa16.6■□□□□ 0.25
SFXN3-205ENST00000470252 FSD2A1L4K1 749 aa16.59■□□□□ 0.25
SFXN3-205ENST00000470252 SAFB2Q14151 953 aaKnown RBP eCLIP16.59■□□□□ 0.25
SFXN3-205ENST00000470252 SMC5Q8IY18 1101 aa16.59■□□□□ 0.25
SFXN3-205ENST00000470252 TRAK2O60296 914 aa16.58■□□□□ 0.25
SFXN3-205ENST00000470252 TMEM57Q8N5G2 664 aa16.58■□□□□ 0.25
SFXN3-205ENST00000470252 CAMSAP1Q5T5Y3 1602 aa16.57■□□□□ 0.24
SFXN3-205ENST00000470252 GGNBP2Q9H3C7 697 aa16.57■□□□□ 0.24
SFXN3-205ENST00000470252 PANK2Q9BZ23 570 aa16.57■□□□□ 0.24
SFXN3-205ENST00000470252 A0A1W2PP64 1363 aa16.57■□□□□ 0.24
SFXN3-205ENST00000470252 ZBTB40Q9NUA8 1239 aa16.56■□□□□ 0.24
SFXN3-205ENST00000470252 ABCC11Q96J66 1382 aa16.56■□□□□ 0.24
SFXN3-205ENST00000470252 COL3A1P02461 1466 aaPredicted RBP16.56■□□□□ 0.24
SFXN3-205ENST00000470252 HECW2Q9P2P5 1572 aa16.56■□□□□ 0.24
SFXN3-205ENST00000470252 RIPK4P57078 832 aa16.55■□□□□ 0.24
SFXN3-205ENST00000470252 ANKRD26Q9UPS8 1709 aa16.55■□□□□ 0.24
SFXN3-205ENST00000470252 IL16Q14005 1332 aa16.54■□□□□ 0.24
SFXN3-205ENST00000470252 FRMPD1Q5SYB0 1578 aa16.54■□□□□ 0.24
SFXN3-205ENST00000470252 VGFO15240 615 aaPredicted RBP16.54■□□□□ 0.24
SFXN3-205ENST00000470252 SIGLEC1Q9BZZ2 1709 aa16.54■□□□□ 0.24
SFXN3-205ENST00000470252 KIF16BQ96L93 1317 aa16.54■□□□□ 0.24
SFXN3-205ENST00000470252 DDX11L8A8MPP1 907 aa16.54■□□□□ 0.24
SFXN3-205ENST00000470252 IPO8O15397 1037 aaKnown RBP16.54■□□□□ 0.24
SFXN3-205ENST00000470252 SRPK2P78362 688 aaKnown RBP16.54■□□□□ 0.24
SFXN3-205ENST00000470252 ZNF692Q9BU19 519 aaPredicted RBP16.54■□□□□ 0.24
SFXN3-205ENST00000470252 LNPKQ9C0E8 428 aa16.54■□□□□ 0.24
SFXN3-205ENST00000470252 ABCC3O15438 1527 aa16.53■□□□□ 0.24
SFXN3-205ENST00000470252 NEXMIFQ5QGS0 1516 aa16.53■□□□□ 0.24
SFXN3-205ENST00000470252 NUCB1Q02818 461 aa16.53■□□□□ 0.24
SFXN3-205ENST00000470252 SENP3Q9H4L4 574 aaPredicted RBP16.53■□□□□ 0.24
SFXN3-205ENST00000470252 NCOA3Q9Y6Q9 1424 aa16.52■□□□□ 0.23
SFXN3-205ENST00000470252 RBM25P49756 843 aaKnown RBP16.52■□□□□ 0.23
SFXN3-205ENST00000470252 STK26Q9P289 416 aa16.52■□□□□ 0.23
SFXN3-205ENST00000470252 MRE11P49959 708 aa16.51■□□□□ 0.23
SFXN3-205ENST00000470252 CHD1LQ86WJ1 897 aa16.5■□□□□ 0.23
SFXN3-205ENST00000470252 PIK3C2BO00750 1634 aa16.5■□□□□ 0.23
SFXN3-205ENST00000470252 FYB1O15117 783 aa16.5■□□□□ 0.23
SFXN3-205ENST00000470252 DIAPH1O60610 1272 aaKnown RBP16.5■□□□□ 0.23
SFXN3-205ENST00000470252 SNX21Q969T3 373 aa16.5■□□□□ 0.23
SFXN3-205ENST00000470252 DDIT3P35638 169 aa16.49■□□□□ 0.23
SFXN3-205ENST00000470252 HSP90AB1P08238 724 aaKnown RBP16.49■□□□□ 0.23
SFXN3-205ENST00000470252 ALDH1L2Q3SY69 923 aa16.49■□□□□ 0.23
SFXN3-205ENST00000470252 POGZQ7Z3K3 1410 aa16.49■□□□□ 0.23
SFXN3-205ENST00000470252 CFAP74Q9C0B2 1584 aa16.49■□□□□ 0.23
SFXN3-205ENST00000470252 PNNQ9H307 717 aaKnown RBP16.48■□□□□ 0.23
SFXN3-205ENST00000470252 GRPEL1Q9HAV7 217 aa16.48■□□□□ 0.23
SFXN3-205ENST00000470252 TERF2IPQ9NYB0 399 aa16.48■□□□□ 0.23
SFXN3-205ENST00000470252 TNPO1Q92973 898 aaKnown RBP16.47■□□□□ 0.23
SFXN3-205ENST00000470252 MYO5BQ9ULV0 1848 aa16.47■□□□□ 0.23
SFXN3-205ENST00000470252 MLH3Q9UHC1 1453 aa16.47■□□□□ 0.23
SFXN3-205ENST00000470252 MINK1Q8N4C8 1332 aaPredicted RBP16.47■□□□□ 0.23
SFXN3-205ENST00000470252 ATAD2Q6PL18 1390 aa16.46■□□□□ 0.23
SFXN3-205ENST00000470252 BMP2KLQ5H9B9 411 aa16.46■□□□□ 0.23
SFXN3-205ENST00000470252 KIF20BQ96Q89 1820 aa16.46■□□□□ 0.23
SFXN3-205ENST00000470252 CLCN1P35523 988 aa16.46■□□□□ 0.22
SFXN3-205ENST00000470252 ANKRD45Q5TZF3 282 aa16.46■□□□□ 0.22
SFXN3-205ENST00000470252 MED14O60244 1454 aa16.46■□□□□ 0.22
SFXN3-205ENST00000470252 CIZ1Q9ULV3 898 aaPredicted RBP16.45■□□□□ 0.22
SFXN3-205ENST00000470252 LRRC7Q96NW7 1537 aa16.45■□□□□ 0.22
SFXN3-205ENST00000470252 CD163L1Q9NR16 1453 aa16.45■□□□□ 0.22
SFXN3-205ENST00000470252 NAP1L5Q96NT1 182 aaPredicted RBP16.45■□□□□ 0.22
SFXN3-205ENST00000470252 GBP4Q96PP9 640 aa16.45■□□□□ 0.22
SFXN3-205ENST00000470252 HSP90AA1P07900 732 aaKnown RBP16.44■□□□□ 0.22
SFXN3-205ENST00000470252 PKNOX2Q96KN3 472 aa16.44■□□□□ 0.22
SFXN3-205ENST00000470252 PPIP5K1Q6PFW1 1433 aa16.44■□□□□ 0.22
SFXN3-205ENST00000470252 C1orf115Q9H7X2 142 aa16.44■□□□□ 0.22
SFXN3-205ENST00000470252 ISY1Q9ULR0 285 aaKnown RBP16.44■□□□□ 0.22
SFXN3-205ENST00000470252 CLTCQ00610 1675 aaKnown RBP16.43■□□□□ 0.22
SFXN3-205ENST00000470252 RAB3GAP1Q15042 981 aa16.43■□□□□ 0.22
SFXN3-205ENST00000470252 GCC1Q96CN9 775 aa16.43■□□□□ 0.22
SFXN3-205ENST00000470252 KIF2CQ99661 725 aa16.43■□□□□ 0.22
SFXN3-205ENST00000470252 FOXD4L1Q9NU39 408 aa16.43■□□□□ 0.22
SFXN3-205ENST00000470252 PTPRMP28827 1452 aa16.43■□□□□ 0.22
SFXN3-205ENST00000470252 ZBTB7BO15156 539 aaPredicted RBP16.43■□□□□ 0.22
SFXN3-205ENST00000470252 FCHSD2O94868 740 aa16.43■□□□□ 0.22
SFXN3-205ENST00000470252 PRKAR2BP31323 418 aa16.43■□□□□ 0.22
SFXN3-205ENST00000470252 IDI1Q13907 227 aa16.43■□□□□ 0.22
SFXN3-205ENST00000470252 HDGFL2Q7Z4V5 671 aaPredicted RBP16.43■□□□□ 0.22
SFXN3-205ENST00000470252 PRAM1Q96QH2 718 aa16.43■□□□□ 0.22
SFXN3-205ENST00000470252 PNPLA6Q8IY17 1366 aa16.43■□□□□ 0.22
SFXN3-205ENST00000470252 CD2BP2O95400 341 aaKnown RBP16.41■□□□□ 0.22
SFXN3-205ENST00000470252 BRPF1P55201 1214 aaPredicted RBP16.41■□□□□ 0.22
SFXN3-205ENST00000470252 TBC1D9Q6ZT07 1266 aa16.41■□□□□ 0.22
SFXN3-205ENST00000470252 ZNF428Q96B54 188 aa16.41■□□□□ 0.22
SFXN3-205ENST00000470252 ZFYVE9O95405 1425 aa16.41■□□□□ 0.22
SFXN3-205ENST00000470252 AK9Q5TCS8 1911 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms