RNA–Protein interactions for RNA: ENST00000470104.1

GBA-208, Transcript of glucosylceramidase beta, human

TSL 3

Gene GBA, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GBA-208	ENST00000470104	APAF1	O14727	1248 aa		10.59	□□□□□ -0.71
GBA-208	ENST00000470104	NALCN	Q8IZF0	1738 aa		10.58	□□□□□ -0.72
GBA-208	ENST00000470104	KIF24	Q5T7B8	1368 aa		10.58	□□□□□ -0.72
GBA-208	ENST00000470104	WWC1	Q8IX03	1113 aa		10.58	□□□□□ -0.72
GBA-208	ENST00000470104	ZNF428	Q96B54	188 aa		10.58	□□□□□ -0.72
GBA-208	ENST00000470104	MYH16	Q9H6N6	1097 aa		10.58	□□□□□ -0.72
GBA-208	ENST00000470104	CABP1	Q9NZU7	370 aa		10.58	□□□□□ -0.72
GBA-208	ENST00000470104	ROBO2	Q9HCK4	1378 aa		10.57	□□□□□ -0.72
GBA-208	ENST00000470104	FCHSD2	O94868	740 aa		10.57	□□□□□ -0.72
GBA-208	ENST00000470104	PDE3A	Q14432	1141 aa		10.57	□□□□□ -0.72
GBA-208	ENST00000470104	TXNDC2	Q86VQ3	553 aa		10.57	□□□□□ -0.72
GBA-208	ENST00000470104	NUDT16	Q96DE0	195 aa	Known RBP	10.57	□□□□□ -0.72
GBA-208	ENST00000470104	CDCA7L	Q96GN5	454 aa		10.57	□□□□□ -0.72
GBA-208	ENST00000470104	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	10.57	□□□□□ -0.72
GBA-208	ENST00000470104	TTC21A	Q8NDW8	1320 aa		10.57	□□□□□ -0.72
GBA-208	ENST00000470104	CALD1	Q05682	793 aa	Known RBP	10.56	□□□□□ -0.72
GBA-208	ENST00000470104	TCP11L2	Q8N4U5	519 aa		10.56	□□□□□ -0.72
GBA-208	ENST00000470104	OVOS2	A0A0J9YW53	1432 aa		10.56	□□□□□ -0.72
GBA-208	ENST00000470104	OVOS2	Q6IE36	1432 aa		10.56	□□□□□ -0.72
GBA-208	ENST00000470104	DIAPH1	O60610	1272 aa	Known RBP	10.55	□□□□□ -0.72
GBA-208	ENST00000470104	NEFM	P07197	916 aa		10.55	□□□□□ -0.72
GBA-208	ENST00000470104	MS4A1	P11836	297 aa		10.55	□□□□□ -0.72
GBA-208	ENST00000470104	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.55	□□□□□ -0.72
GBA-208	ENST00000470104	USP6	P35125	1406 aa		10.55	□□□□□ -0.72
GBA-208	ENST00000470104	MAPK8IP3	Q9UPT6	1336 aa		10.55	□□□□□ -0.72
GBA-208	ENST00000470104	USP31	Q70CQ4	1352 aa		10.54	□□□□□ -0.72
GBA-208	ENST00000470104	LTK	P29376	864 aa		10.54	□□□□□ -0.72
GBA-208	ENST00000470104	IRX6	P78412	446 aa	Predicted RBP	10.54	□□□□□ -0.72
GBA-208	ENST00000470104	SSH2	Q76I76	1423 aa		10.54	□□□□□ -0.72
GBA-208	ENST00000470104	WAPL	Q7Z5K2	1190 aa		10.54	□□□□□ -0.72
GBA-208	ENST00000470104	FANCI	Q9NVI1	1328 aa		10.54	□□□□□ -0.72
GBA-208	ENST00000470104	PTPRU	Q92729	1446 aa		10.53	□□□□□ -0.72
GBA-208	ENST00000470104	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.53	□□□□□ -0.72
GBA-208	ENST00000470104	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.53	□□□□□ -0.72
GBA-208	ENST00000470104	COG3	Q96JB2	828 aa		10.53	□□□□□ -0.72
GBA-208	ENST00000470104	PLEKHF1	Q96S99	279 aa		10.53	□□□□□ -0.72
GBA-208	ENST00000470104	GGNBP2	Q9H3C7	697 aa		10.53	□□□□□ -0.72
GBA-208	ENST00000470104	SENP3	Q9H4L4	574 aa	Predicted RBP	10.53	□□□□□ -0.72
GBA-208	ENST00000470104	MAP2	P11137	1827 aa	Known RBP	10.53	□□□□□ -0.72
GBA-208	ENST00000470104	FMN2	Q9NZ56	1722 aa		10.53	□□□□□ -0.72
GBA-208	ENST00000470104	CHD2	O14647	1828 aa	Known RBP	10.52	□□□□□ -0.73
GBA-208	ENST00000470104	TCERG1	O14776	1098 aa	Known RBP	10.52	□□□□□ -0.73
GBA-208	ENST00000470104	LMOD3	Q0VAK6	560 aa		10.52	□□□□□ -0.73
GBA-208	ENST00000470104	B4GALNT3	Q6L9W6	998 aa		10.52	□□□□□ -0.73
GBA-208	ENST00000470104	PLPPR3	Q6T4P5	718 aa		10.52	□□□□□ -0.73
GBA-208	ENST00000470104	TTC21B	Q7Z4L5	1316 aa		10.52	□□□□□ -0.73
GBA-208	ENST00000470104	HAP1	P54257	671 aa	Predicted RBP	10.51	□□□□□ -0.73
GBA-208	ENST00000470104	CENPQ	Q7L2Z9	268 aa	Predicted RBP	10.51	□□□□□ -0.73
GBA-208	ENST00000470104	CCDC146	Q8IYE0	955 aa		10.51	□□□□□ -0.73
GBA-208	ENST00000470104	POLK	Q9UBT6	870 aa		10.51	□□□□□ -0.73
GBA-208	ENST00000470104	SALL2	Q9Y467	1007 aa	Predicted RBP	10.51	□□□□□ -0.73
GBA-208	ENST00000470104	NWD1	Q149M9	1564 aa		10.51	□□□□□ -0.73
GBA-208	ENST00000470104	AMOTL2	Q9Y2J4	779 aa		10.5	□□□□□ -0.73
GBA-208	ENST00000470104	RBM19	Q9Y4C8	960 aa	Known RBP	10.5	□□□□□ -0.73
GBA-208	ENST00000470104	PRR36	Q9H6K5	1346 aa		10.5	□□□□□ -0.73
GBA-208	ENST00000470104	TRH	P20396	242 aa	Predicted RBP	10.49	□□□□□ -0.73
GBA-208	ENST00000470104	TMPO	P42166	694 aa	Known RBP	10.49	□□□□□ -0.73
GBA-208	ENST00000470104	BRPF1	P55201	1214 aa	Predicted RBP	10.49	□□□□□ -0.73
GBA-208	ENST00000470104	ANKLE2	Q86XL3	938 aa		10.49	□□□□□ -0.73
GBA-208	ENST00000470104	EXOC6	Q8TAG9	804 aa		10.49	□□□□□ -0.73
GBA-208	ENST00000470104	RGPD1	P0DJD0	1748 aa		10.48	□□□□□ -0.73
GBA-208	ENST00000470104	TNNT2	P45379	298 aa	Predicted RBP	10.48	□□□□□ -0.73
GBA-208	ENST00000470104	MYT1	Q01538	1121 aa		10.47	□□□□□ -0.73
GBA-208	ENST00000470104	RSPH6A	Q9H0K4	717 aa		10.47	□□□□□ -0.73
GBA-208	ENST00000470104	ACE	P12821	1306 aa		10.47	□□□□□ -0.73
GBA-208	ENST00000470104	KDM2B	Q8NHM5	1336 aa		10.47	□□□□□ -0.73
GBA-208	ENST00000470104	KIF16B	Q96L93	1317 aa		10.47	□□□□□ -0.73
GBA-208	ENST00000470104	RTL1	A6NKG5	1358 aa		10.47	□□□□□ -0.73
GBA-208	ENST00000470104	ADGRL3	Q9HAR2	1447 aa		10.47	□□□□□ -0.73
GBA-208	ENST00000470104	NCOA3	Q9Y6Q9	1424 aa		10.47	□□□□□ -0.73
GBA-208	ENST00000470104	PHRF1	Q9P1Y6	1649 aa	Known RBP	10.47	□□□□□ -0.73
GBA-208	ENST00000470104	U2SURP	O15042	1029 aa	Known RBP	10.46	□□□□□ -0.73
GBA-208	ENST00000470104	IL13	P35225	146 aa		10.46	□□□□□ -0.73
GBA-208	ENST00000470104	RARS	P54136	660 aa	Known RBP	10.46	□□□□□ -0.73
GBA-208	ENST00000470104	ALDH1L2	Q3SY69	923 aa		10.46	□□□□□ -0.73
GBA-208	ENST00000470104	CHMP4B	Q9H444	224 aa	Known RBP	10.46	□□□□□ -0.73
GBA-208	ENST00000470104	ARHGEF10	O15013	1369 aa		10.46	□□□□□ -0.74
GBA-208	ENST00000470104	FLT4	P35916	1363 aa		10.46	□□□□□ -0.74
GBA-208	ENST00000470104	SBNO1	A3KN83	1393 aa		10.45	□□□□□ -0.74
GBA-208	ENST00000470104	CEBPA	P49715	358 aa	Predicted RBP	10.45	□□□□□ -0.74
GBA-208	ENST00000470104	NFE2L2	Q16236	605 aa		10.45	□□□□□ -0.74
GBA-208	ENST00000470104	CRBN	Q96SW2	442 aa		10.45	□□□□□ -0.74
GBA-208	ENST00000470104	SPINK5	Q9NQ38	1064 aa	Predicted RBP	10.45	□□□□□ -0.74
GBA-208	ENST00000470104	NPHP4	O75161	1426 aa	Predicted RBP	10.44	□□□□□ -0.74
GBA-208	ENST00000470104	KDR	P35968	1356 aa		10.44	□□□□□ -0.74
GBA-208	ENST00000470104	GNAI1	P63096	354 aa		10.44	□□□□□ -0.74
GBA-208	ENST00000470104	NME9	Q86XW9	330 aa		10.44	□□□□□ -0.74
GBA-208	ENST00000470104	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
GBA-208	ENST00000470104	SLC26A8	Q96RN1	970 aa		10.44	□□□□□ -0.74
GBA-208	ENST00000470104	IFT57	Q9NWB7	429 aa		10.44	□□□□□ -0.74
GBA-208	ENST00000470104	TRIM35	Q9UPQ4	493 aa		10.44	□□□□□ -0.74
GBA-208	ENST00000470104	PIK3C2A	O00443	1686 aa		10.44	□□□□□ -0.74
GBA-208	ENST00000470104	DCC	P43146	1447 aa		10.43	□□□□□ -0.74
GBA-208	ENST00000470104	MST1R	Q04912	1400 aa		10.43	□□□□□ -0.74
GBA-208	ENST00000470104	PLEKHG2	Q9H7P9	1386 aa		10.43	□□□□□ -0.74
GBA-208	ENST00000470104	IPO8	O15397	1037 aa	Known RBP	10.43	□□□□□ -0.74
GBA-208	ENST00000470104	PMFBP1	Q8TBY8	1022 aa		10.43	□□□□□ -0.74
GBA-208	ENST00000470104	KIF1A	Q12756	1690 aa		10.43	□□□□□ -0.74
GBA-208	ENST00000470104	SOS1	Q07889	1333 aa	Predicted RBP	10.42	□□□□□ -0.74
GBA-208	ENST00000470104	CANX	P27824	592 aa	Known RBP	10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms