RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 TCP11L2Q8N4U5 519 aa8.96□□□□□ -0.98
GAPVD1-215ENST00000470056 NEUROD2Q15784 382 aa8.95□□□□□ -0.98
GAPVD1-215ENST00000470056 NKTRP30414 1462 aaKnown RBP8.95□□□□□ -0.98
GAPVD1-215ENST00000470056 B4GALNT3Q6L9W6 998 aa8.95□□□□□ -0.98
GAPVD1-215ENST00000470056 CDCA7LQ96GN5 454 aa8.95□□□□□ -0.98
GAPVD1-215ENST00000470056 DIP2AQ14689 1571 aa8.95□□□□□ -0.98
GAPVD1-215ENST00000470056 AMOTL2Q9Y2J4 779 aa8.95□□□□□ -0.98
GAPVD1-215ENST00000470056 FCHSD2O94868 740 aa8.94□□□□□ -0.98
GAPVD1-215ENST00000470056 NGDNQ8NEJ9 315 aaKnown RBP8.94□□□□□ -0.98
GAPVD1-215ENST00000470056 NPM2Q86SE8 214 aaKnown RBP8.94□□□□□ -0.98
GAPVD1-215ENST00000470056 CPS1P31327 1500 aa8.94□□□□□ -0.98
GAPVD1-215ENST00000470056 SLC26A8Q96RN1 970 aa8.94□□□□□ -0.98
GAPVD1-215ENST00000470056 NOP58Q9Y2X3 529 aaKnown RBP8.94□□□□□ -0.98
GAPVD1-215ENST00000470056 CHMP4BQ9H444 224 aaKnown RBP8.93□□□□□ -0.98
GAPVD1-215ENST00000470056 SLIT1O75093 1534 aa8.93□□□□□ -0.98
GAPVD1-215ENST00000470056 TTC21AQ8NDW8 1320 aa8.93□□□□□ -0.98
GAPVD1-215ENST00000470056 PLEKHH1Q9ULM0 1364 aa8.93□□□□□ -0.98
GAPVD1-215ENST00000470056 PTCH1Q13635 1447 aa8.93□□□□□ -0.98
GAPVD1-215ENST00000470056 WWC1Q8IX03 1113 aa8.93□□□□□ -0.98
GAPVD1-215ENST00000470056 DUSP27Q5VZP5 1158 aa8.93□□□□□ -0.98
GAPVD1-215ENST00000470056 C14orf37Q86TY3 774 aa8.93□□□□□ -0.98
GAPVD1-215ENST00000470056 AATKQ6ZMQ8 1374 aa8.93□□□□□ -0.98
GAPVD1-215ENST00000470056 ZNF521Q96K83 1311 aa8.92□□□□□ -0.98
GAPVD1-215ENST00000470056 ARHGAP23Q9P227 1491 aa8.92□□□□□ -0.98
GAPVD1-215ENST00000470056 ADAMTS13Q76LX8 1427 aa8.92□□□□□ -0.98
GAPVD1-215ENST00000470056 LTKP29376 864 aa8.92□□□□□ -0.98
GAPVD1-215ENST00000470056 IL16Q14005 1332 aa8.92□□□□□ -0.98
GAPVD1-215ENST00000470056 PLEKHG3A1L390 1219 aa8.92□□□□□ -0.98
GAPVD1-215ENST00000470056 TSHZ2Q9NRE2 1034 aa8.92□□□□□ -0.98
GAPVD1-215ENST00000470056 L1TD1Q5T7N2 865 aaKnown RBP8.91□□□□□ -0.98
GAPVD1-215ENST00000470056 NBR1Q14596 966 aa8.91□□□□□ -0.98
GAPVD1-215ENST00000470056 ROBO2Q9HCK4 1378 aa8.9□□□□□ -0.98
GAPVD1-215ENST00000470056 IPO8O15397 1037 aaKnown RBP8.9□□□□□ -0.98
GAPVD1-215ENST00000470056 PDE3AQ14432 1141 aa8.9□□□□□ -0.98
GAPVD1-215ENST00000470056 TCERG1O14776 1098 aaKnown RBP8.9□□□□□ -0.98
GAPVD1-215ENST00000470056 CPSF1Q10570 1443 aaKnown RBP8.9□□□□□ -0.99
GAPVD1-215ENST00000470056 ANKARQ7Z5J8 1434 aa8.9□□□□□ -0.99
GAPVD1-215ENST00000470056 EXOC6Q8TAG9 804 aa8.9□□□□□ -0.99
GAPVD1-215ENST00000470056 ZNF428Q96B54 188 aa8.9□□□□□ -0.99
GAPVD1-215ENST00000470056 RRP7AQ9Y3A4 280 aaKnown RBP8.9□□□□□ -0.99
GAPVD1-215ENST00000470056 UBR1Q8IWV7 1749 aa8.9□□□□□ -0.99
GAPVD1-215ENST00000470056 KNDC1Q76NI1 1749 aa8.89□□□□□ -0.99
GAPVD1-215ENST00000470056 RIPK4P57078 832 aa8.89□□□□□ -0.99
GAPVD1-215ENST00000470056 USP35Q9P2H5 1018 aa8.89□□□□□ -0.99
GAPVD1-215ENST00000470056 CDC42BPGQ6DT37 1551 aa8.89□□□□□ -0.99
GAPVD1-215ENST00000470056 TTC21BQ7Z4L5 1316 aa8.89□□□□□ -0.99
GAPVD1-215ENST00000470056 FER1L4A9Z1Z3 1794 aa8.89□□□□□ -0.99
GAPVD1-215ENST00000470056 MYO5BQ9ULV0 1848 aa8.89□□□□□ -0.99
GAPVD1-215ENST00000470056 ACEP12821 1306 aa8.89□□□□□ -0.99
GAPVD1-215ENST00000470056 FTSJ3Q8IY81 847 aaKnown RBP8.89□□□□□ -0.99
GAPVD1-215ENST00000470056 NME9Q86XW9 330 aa8.89□□□□□ -0.99
GAPVD1-215ENST00000470056 PTMSP20962 102 aa8.89□□□□□ -0.99
GAPVD1-215ENST00000470056 CENPQQ7L2Z9 268 aaPredicted RBP8.88□□□□□ -0.99
GAPVD1-215ENST00000470056 GNAI1P63096 354 aa8.88□□□□□ -0.99
GAPVD1-215ENST00000470056 TMPOP42166 694 aaKnown RBP8.88□□□□□ -0.99
GAPVD1-215ENST00000470056 TRMT2AQ8IZ69 625 aaKnown RBP8.88□□□□□ -0.99
GAPVD1-215ENST00000470056 POLKQ9UBT6 870 aa8.88□□□□□ -0.99
GAPVD1-215ENST00000470056 PNPLA6Q8IY17 1366 aa8.88□□□□□ -0.99
GAPVD1-215ENST00000470056 CDK12Q9NYV4 1490 aaPredicted RBP8.87□□□□□ -0.99
GAPVD1-215ENST00000470056 ADGRB2O60241 1585 aa8.87□□□□□ -0.99
GAPVD1-215ENST00000470056 PRKAR2BP31323 418 aa8.87□□□□□ -0.99
GAPVD1-215ENST00000470056 CRBNQ96SW2 442 aa8.87□□□□□ -0.99
GAPVD1-215ENST00000470056 CEP170BQ9Y4F5 1589 aaPredicted RBP8.87□□□□□ -0.99
GAPVD1-215ENST00000470056 FRAT1Q92837 279 aaPredicted RBP8.87□□□□□ -0.99
GAPVD1-215ENST00000470056 DNAJC5Q9H3Z4 198 aa8.87□□□□□ -0.99
GAPVD1-215ENST00000470056 CD163L1Q9NR16 1453 aa8.87□□□□□ -0.99
GAPVD1-215ENST00000470056 AMPHP49418 695 aa8.87□□□□□ -0.99
GAPVD1-215ENST00000470056 KIF16BQ96L93 1317 aa8.87□□□□□ -0.99
GAPVD1-215ENST00000470056 NFE2L2Q16236 605 aa8.86□□□□□ -0.99
GAPVD1-215ENST00000470056 ZKSCAN2Q63HK3 967 aa8.86□□□□□ -0.99
GAPVD1-215ENST00000470056 NRXN3Q9Y4C0 1643 aa8.86□□□□□ -0.99
GAPVD1-215ENST00000470056 NUTM2FA1L443 756 aa8.86□□□□□ -0.99
GAPVD1-215ENST00000470056 PMFBP1Q8TBY8 1022 aa8.86□□□□□ -0.99
GAPVD1-215ENST00000470056 SMC4Q9NTJ3 1288 aa8.85□□□□□ -0.99
GAPVD1-215ENST00000470056 RBM19Q9Y4C8 960 aaKnown RBP8.85□□□□□ -0.99
GAPVD1-215ENST00000470056 USP6P35125 1406 aa8.85□□□□□ -0.99
GAPVD1-215ENST00000470056 PLIN1O60240 522 aa8.85□□□□□ -0.99
GAPVD1-215ENST00000470056 CHMP4AQ9BY43 222 aa8.85□□□□□ -0.99
GAPVD1-215ENST00000470056 EMILIN1Q9Y6C2 1016 aa8.85□□□□□ -0.99
GAPVD1-215ENST00000470056 RTF1Q92541 710 aaKnown RBP8.85□□□□□ -0.99
GAPVD1-215ENST00000470056 CFAP44Q96MT7 982 aa8.85□□□□□ -0.99
GAPVD1-215ENST00000470056 PHF23Q9BUL5 403 aaPredicted RBP8.85□□□□□ -0.99
GAPVD1-215ENST00000470056 C3P01024 1663 aa8.85□□□□□ -0.99
GAPVD1-215ENST00000470056 IQSEC2Q5JU85 1478 aa8.84□□□□□ -0.99
GAPVD1-215ENST00000470056 KCNA6P17658 529 aa8.84□□□□□ -0.99
GAPVD1-215ENST00000470056 NLRP6P59044 892 aa8.84□□□□□ -0.99
GAPVD1-215ENST00000470056 KIF24Q5T7B8 1368 aa8.84□□□□□ -0.99
GAPVD1-215ENST00000470056 PRR36Q9H6K5 1346 aa8.84□□□□□ -0.99
GAPVD1-215ENST00000470056 PAK3O75914 559 aaPredicted RBP8.84□□□□□ -0.99
GAPVD1-215ENST00000470056 NPHP4O75161 1426 aaPredicted RBP8.84□□□□□ -0.99
GAPVD1-215ENST00000470056 PHF8Q9UPP1 1060 aa8.84□□□□□ -0.99
GAPVD1-215ENST00000470056 IFT57Q9NWB7 429 aa8.84□□□□□ -0.99
GAPVD1-215ENST00000470056 RWDD1Q9H446 243 aaPredicted RBP8.83□□□□□ -1
GAPVD1-215ENST00000470056 FLT4P35916 1363 aa8.83□□□□□ -1
GAPVD1-215ENST00000470056 LAS1LQ9Y4W2 734 aaKnown RBP8.83□□□□□ -1
GAPVD1-215ENST00000470056 RARSP54136 660 aaKnown RBP8.83□□□□□ -1
GAPVD1-215ENST00000470056 ALDH1L2Q3SY69 923 aa8.83□□□□□ -1
GAPVD1-215ENST00000470056 KCNH5Q8NCM2 988 aa8.83□□□□□ -1
GAPVD1-215ENST00000470056 GAS2L2Q8NHY3 880 aa8.83□□□□□ -1
GAPVD1-215ENST00000470056 FANCIQ9NVI1 1328 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms