RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 ADGRL3Q9HAR2 1447 aa11.76□□□□□ -0.53
GAPVD1-213ENST00000469498 RBM33Q96EV2 1170 aaKnown RBP11.75□□□□□ -0.53
GAPVD1-213ENST00000469498 PROSER2Q86WR7 435 aaPredicted RBP11.74□□□□□ -0.53
GAPVD1-213ENST00000469498 TESK2Q96S53 571 aa11.74□□□□□ -0.53
GAPVD1-213ENST00000469498 TMEM94Q12767 1356 aa11.73□□□□□ -0.53
GAPVD1-213ENST00000469498 ASTLQ6HA08 431 aaPredicted RBP11.73□□□□□ -0.53
GAPVD1-213ENST00000469498 SIRT1Q96EB6 747 aa11.73□□□□□ -0.53
GAPVD1-213ENST00000469498 MON2Q7Z3U7 1717 aa11.72□□□□□ -0.53
GAPVD1-213ENST00000469498 C14orf37Q86TY3 774 aa11.72□□□□□ -0.53
GAPVD1-213ENST00000469498 RTN4Q9NQC3 1192 aaKnown RBP11.72□□□□□ -0.53
GAPVD1-213ENST00000469498 ZNF316A6NFI3 1004 aaPredicted RBP11.71□□□□□ -0.53
GAPVD1-213ENST00000469498 TMF1P82094 1093 aa11.71□□□□□ -0.53
GAPVD1-213ENST00000469498 MIER1Q8N108 512 aa11.71□□□□□ -0.53
GAPVD1-213ENST00000469498 POLR3GLQ9BT43 218 aa11.71□□□□□ -0.53
GAPVD1-213ENST00000469498 KIF20BQ96Q89 1820 aa11.71□□□□□ -0.54
GAPVD1-213ENST00000469498 KIF1AQ12756 1690 aa11.71□□□□□ -0.54
GAPVD1-213ENST00000469498 ATP7BP35670 1465 aa11.7□□□□□ -0.54
GAPVD1-213ENST00000469498 CCDC7Q96M83 1385 aa11.7□□□□□ -0.54
GAPVD1-213ENST00000469498 KIF7Q2M1P5 1343 aa11.7□□□□□ -0.54
GAPVD1-213ENST00000469498 EVC2Q86UK5 1308 aa11.7□□□□□ -0.54
GAPVD1-213ENST00000469498 C11orf95C9JLR9 678 aaPredicted RBP11.7□□□□□ -0.54
GAPVD1-213ENST00000469498 WASHC2AQ641Q2 1341 aa11.69□□□□□ -0.54
GAPVD1-213ENST00000469498 LCE2DQ5TA82 110 aaPredicted RBP11.69□□□□□ -0.54
GAPVD1-213ENST00000469498 NCOA3Q9Y6Q9 1424 aa11.69□□□□□ -0.54
GAPVD1-213ENST00000469498 MSH6P52701 1360 aa11.68□□□□□ -0.54
GAPVD1-213ENST00000469498 SRPK2P78362 688 aaKnown RBP11.68□□□□□ -0.54
GAPVD1-213ENST00000469498 PLCD3Q8N3E9 789 aa11.68□□□□□ -0.54
GAPVD1-213ENST00000469498 DCCP43146 1447 aa11.68□□□□□ -0.54
GAPVD1-213ENST00000469498 NRKQ7Z2Y5 1582 aa11.67□□□□□ -0.54
GAPVD1-213ENST00000469498 WASLO00401 505 aaPredicted RBP11.67□□□□□ -0.54
GAPVD1-213ENST00000469498 AMER1Q5JTC6 1135 aaPredicted RBP11.67□□□□□ -0.54
GAPVD1-213ENST00000469498 CDK19Q9BWU1 502 aa11.67□□□□□ -0.54
GAPVD1-213ENST00000469498 CABP2Q9NPB3 220 aa11.67□□□□□ -0.54
GAPVD1-213ENST00000469498 ANKRD26Q9UPS8 1709 aa11.66□□□□□ -0.54
GAPVD1-213ENST00000469498 NUTM2FA1L443 756 aa11.66□□□□□ -0.54
GAPVD1-213ENST00000469498 ATMINO43313 823 aaPredicted RBP11.66□□□□□ -0.54
GAPVD1-213ENST00000469498 ANKARQ7Z5J8 1434 aa11.66□□□□□ -0.54
GAPVD1-213ENST00000469498 ATAD2Q6PL18 1390 aa11.66□□□□□ -0.54
GAPVD1-213ENST00000469498 ROBO1Q9Y6N7 1651 aa11.65□□□□□ -0.54
GAPVD1-213ENST00000469498 PRR36Q9H6K5 1346 aa11.65□□□□□ -0.54
GAPVD1-213ENST00000469498 POTEJP0CG39 1038 aa11.65□□□□□ -0.54
GAPVD1-213ENST00000469498 MST1RQ04912 1400 aa11.65□□□□□ -0.54
GAPVD1-213ENST00000469498 PPIP5K1Q6PFW1 1433 aa11.65□□□□□ -0.54
GAPVD1-213ENST00000469498 NHSL1Q5SYE7 1610 aa11.64□□□□□ -0.55
GAPVD1-213ENST00000469498 SLC24A1O60721 1099 aa11.64□□□□□ -0.55
GAPVD1-213ENST00000469498 CDCA8Q53HL2 280 aa11.64□□□□□ -0.55
GAPVD1-213ENST00000469498 TRPM3Q9HCF6 1732 aaPredicted RBP11.63□□□□□ -0.55
GAPVD1-213ENST00000469498 C19orf44Q9H6X5 657 aa11.63□□□□□ -0.55
GAPVD1-213ENST00000469498 C1orf167Q5SNV9 1468 aa11.63□□□□□ -0.55
GAPVD1-213ENST00000469498 ATF3P18847 181 aa11.62□□□□□ -0.55
GAPVD1-213ENST00000469498 TMC1Q8TDI8 760 aa11.62□□□□□ -0.55
GAPVD1-213ENST00000469498 NUDT16Q96DE0 195 aaKnown RBP11.62□□□□□ -0.55
GAPVD1-213ENST00000469498 MS4A3Q96HJ5 214 aa11.62□□□□□ -0.55
GAPVD1-213ENST00000469498 IQSEC2Q5JU85 1478 aa11.62□□□□□ -0.55
GAPVD1-213ENST00000469498 CD163L1Q9NR16 1453 aa11.62□□□□□ -0.55
GAPVD1-213ENST00000469498 MARF1Q9Y4F3 1742 aaKnown RBP11.61□□□□□ -0.55
GAPVD1-213ENST00000469498 KLHL34Q8N239 644 aa11.61□□□□□ -0.55
GAPVD1-213ENST00000469498 PHLPP1O60346 1717 aa11.6□□□□□ -0.55
GAPVD1-213ENST00000469498 NINLQ9Y2I6 1382 aa11.6□□□□□ -0.55
GAPVD1-213ENST00000469498 DDX10Q13206 875 aaKnown RBP11.6□□□□□ -0.55
GAPVD1-213ENST00000469498 PIK3C2AO00443 1686 aa11.59□□□□□ -0.55
GAPVD1-213ENST00000469498 A0A1W2PP64 1363 aa11.59□□□□□ -0.55
GAPVD1-213ENST00000469498 CADPS2Q86UW7 1296 aa11.59□□□□□ -0.55
GAPVD1-213ENST00000469498 PUS7Q96PZ0 661 aaKnown RBP11.59□□□□□ -0.55
GAPVD1-213ENST00000469498 ALS2Q96Q42 1657 aa11.59□□□□□ -0.55
GAPVD1-213ENST00000469498 ANKRD36BQ8N2N9 1353 aa11.58□□□□□ -0.56
GAPVD1-213ENST00000469498 CDAN1Q8IWY9 1227 aa11.58□□□□□ -0.56
GAPVD1-213ENST00000469498 SLC12A5Q9H2X9 1139 aa11.58□□□□□ -0.56
GAPVD1-213ENST00000469498 USP54Q70EL1 1684 aa11.58□□□□□ -0.56
GAPVD1-213ENST00000469498 ABCA3Q99758 1704 aa11.57□□□□□ -0.56
GAPVD1-213ENST00000469498 ESCO1Q5FWF5 840 aa11.57□□□□□ -0.56
GAPVD1-213ENST00000469498 PMFBP1Q8TBY8 1022 aa11.57□□□□□ -0.56
GAPVD1-213ENST00000469498 CABP1Q9NZU7 370 aa11.57□□□□□ -0.56
GAPVD1-213ENST00000469498 CCDC61Q9Y6R9 512 aa11.57□□□□□ -0.56
GAPVD1-213ENST00000469498 NSD3Q9BZ95 1437 aa11.57□□□□□ -0.56
GAPVD1-213ENST00000469498 PLEKHG5O94827 1062 aa11.56□□□□□ -0.56
GAPVD1-213ENST00000469498 CPSF1Q10570 1443 aaKnown RBP11.56□□□□□ -0.56
GAPVD1-213ENST00000469498 CERKQ8TCT0 537 aa11.56□□□□□ -0.56
GAPVD1-213ENST00000469498 SPOCK2Q92563 424 aa11.56□□□□□ -0.56
GAPVD1-213ENST00000469498 ORAI2Q96SN7 254 aa11.56□□□□□ -0.56
GAPVD1-213ENST00000469498 PHF8Q9UPP1 1060 aa11.56□□□□□ -0.56
GAPVD1-213ENST00000469498 CRYBG1Q9Y4K1 1723 aa11.56□□□□□ -0.56
GAPVD1-213ENST00000469498 AHDC1Q5TGY3 1603 aaPredicted RBP11.56□□□□□ -0.56
GAPVD1-213ENST00000469498 MAP2P11137 1827 aaKnown RBP11.56□□□□□ -0.56
GAPVD1-213ENST00000469498 POLR3AO14802 1390 aaPredicted RBP11.55□□□□□ -0.56
GAPVD1-213ENST00000469498 KTN1Q86UP2 1357 aaKnown RBP11.55□□□□□ -0.56
GAPVD1-213ENST00000469498 USP6P35125 1406 aa11.55□□□□□ -0.56
GAPVD1-213ENST00000469498 LTN1O94822 1766 aa11.55□□□□□ -0.56
GAPVD1-213ENST00000469498 PANK3Q9H999 370 aa11.55□□□□□ -0.56
GAPVD1-213ENST00000469498 ACEP12821 1306 aa11.55□□□□□ -0.56
GAPVD1-213ENST00000469498 COL16A1Q07092 1604 aaPredicted RBP11.54□□□□□ -0.56
GAPVD1-213ENST00000469498 PHRF1Q9P1Y6 1649 aaKnown RBP11.54□□□□□ -0.56
GAPVD1-213ENST00000469498 MNX1P50219 401 aaPredicted RBP11.54□□□□□ -0.56
GAPVD1-213ENST00000469498 HDGFL2Q7Z4V5 671 aaPredicted RBP11.54□□□□□ -0.56
GAPVD1-213ENST00000469498 NGDNQ8NEJ9 315 aaKnown RBP11.54□□□□□ -0.56
GAPVD1-213ENST00000469498 TERF2IPQ9NYB0 399 aa11.54□□□□□ -0.56
GAPVD1-213ENST00000469498 SLAIN2Q9P270 581 aa11.54□□□□□ -0.56
GAPVD1-213ENST00000469498 PXDNQ92626 1479 aa11.54□□□□□ -0.56
GAPVD1-213ENST00000469498 EDC4Q6P2E9 1401 aaKnown RBP11.53□□□□□ -0.56
GAPVD1-213ENST00000469498 PLEKHG3A1L390 1219 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms