RNA–Protein interactions for RNA: ENST00000469420.1

CBX6-203, Transcript of chromobox 6, humanhuman

TSL 2

Gene CBX6, Length 2,213 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-203ENST00000469420 TNNQ9UQP3 1299 aa21.94■■□□□ 1.1
CBX6-203ENST00000469420 PPP6R1Q9UPN7 881 aa21.93■■□□□ 1.1
CBX6-203ENST00000469420 RLBP1P12271 317 aa21.91■■□□□ 1.1
CBX6-203ENST00000469420 DLC1Q96QB1 1528 aa21.91■■□□□ 1.1
CBX6-203ENST00000469420 CABP1Q9NZU7 370 aa21.91■■□□□ 1.1
CBX6-203ENST00000469420 U2SURPO15042 1029 aaKnown RBP21.9■■□□□ 1.1
CBX6-203ENST00000469420 MYH16Q9H6N6 1097 aa21.9■■□□□ 1.1
CBX6-203ENST00000469420 TERF2IPQ9NYB0 399 aa21.9■■□□□ 1.1
CBX6-203ENST00000469420 MED14O60244 1454 aa21.89■■□□□ 1.1
CBX6-203ENST00000469420 NCBP3Q53F19 620 aaKnown RBP21.87■■□□□ 1.09
CBX6-203ENST00000469420 PLEKHF1Q96S99 279 aa21.87■■□□□ 1.09
CBX6-203ENST00000469420 SLC4A3P48751 1232 aa21.87■■□□□ 1.09
CBX6-203ENST00000469420 NEFMP07197 916 aa21.86■■□□□ 1.09
CBX6-203ENST00000469420 TSR2Q969E8 191 aaKnown RBP21.86■■□□□ 1.09
CBX6-203ENST00000469420 METP08581 1390 aa21.86■■□□□ 1.09
CBX6-203ENST00000469420 FBLN1P23142 703 aa21.86■■□□□ 1.09
CBX6-203ENST00000469420 ZMYM3Q14202 1370 aa21.85■■□□□ 1.09
CBX6-203ENST00000469420 MAP2P11137 1827 aaKnown RBP21.85■■□□□ 1.09
CBX6-203ENST00000469420 PCDHB15Q9Y5E8 787 aa21.84■■□□□ 1.09
CBX6-203ENST00000469420 TMPOP42166 694 aaKnown RBP21.83■■□□□ 1.09
CBX6-203ENST00000469420 MAPK8IP3Q9UPT6 1336 aa21.83■■□□□ 1.09
CBX6-203ENST00000469420 HDGFL2Q7Z4V5 671 aaPredicted RBP21.83■■□□□ 1.08
CBX6-203ENST00000469420 PPM1GO15355 546 aaPredicted RBP21.82■■□□□ 1.08
CBX6-203ENST00000469420 TRIM35Q9UPQ4 493 aa21.82■■□□□ 1.08
CBX6-203ENST00000469420 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.81■■□□□ 1.08
CBX6-203ENST00000469420 PNPLA6Q8IY17 1366 aa21.81■■□□□ 1.08
CBX6-203ENST00000469420 UBR1Q8IWV7 1749 aa21.8■■□□□ 1.08
CBX6-203ENST00000469420 PMFBP1Q8TBY8 1022 aa21.8■■□□□ 1.08
CBX6-203ENST00000469420 KNDC1Q76NI1 1749 aa21.8■■□□□ 1.08
CBX6-203ENST00000469420 ATP7BP35670 1465 aa21.79■■□□□ 1.08
CBX6-203ENST00000469420 AAMPQ13685 434 aa21.79■■□□□ 1.08
CBX6-203ENST00000469420 EXOSC9Q06265 439 aaKnown RBP21.79■■□□□ 1.08
CBX6-203ENST00000469420 NCKAP5LQ9HCH0 1330 aa21.79■■□□□ 1.08
CBX6-203ENST00000469420 LRRC7Q96NW7 1537 aa21.78■■□□□ 1.08
CBX6-203ENST00000469420 MVPQ14764 893 aaKnown RBP21.78■■□□□ 1.08
CBX6-203ENST00000469420 TXNDC2Q86VQ3 553 aa21.78■■□□□ 1.08
CBX6-203ENST00000469420 DAXXQ9UER7 740 aaPredicted RBP21.78■■□□□ 1.08
CBX6-203ENST00000469420 DIAPH1O60610 1272 aaKnown RBP21.78■■□□□ 1.08
CBX6-203ENST00000469420 ZKSCAN2Q63HK3 967 aa21.78■■□□□ 1.08
CBX6-203ENST00000469420 USP35Q9P2H5 1018 aa21.78■■□□□ 1.08
CBX6-203ENST00000469420 SMC4Q9NTJ3 1288 aa21.77■■□□□ 1.08
CBX6-203ENST00000469420 CDC42BPGQ6DT37 1551 aa21.76■■□□□ 1.07
CBX6-203ENST00000469420 USP19O94966 1318 aa21.76■■□□□ 1.07
CBX6-203ENST00000469420 CT47B1P0C2W7 299 aaPredicted RBP21.76■■□□□ 1.07
CBX6-203ENST00000469420 FTSJ3Q8IY81 847 aaKnown RBP21.76■■□□□ 1.07
CBX6-203ENST00000469420 CPSF1Q10570 1443 aaKnown RBP21.75■■□□□ 1.07
CBX6-203ENST00000469420 WASLO00401 505 aaPredicted RBP21.75■■□□□ 1.07
CBX6-203ENST00000469420 SEC24BO95487 1268 aa21.75■■□□□ 1.07
CBX6-203ENST00000469420 RIPK4P57078 832 aa21.75■■□□□ 1.07
CBX6-203ENST00000469420 DZIP1LQ8IYY4 767 aaKnown RBP21.75■■□□□ 1.07
CBX6-203ENST00000469420 POLKQ9UBT6 870 aa21.75■■□□□ 1.07
CBX6-203ENST00000469420 ZRANB1Q9UGI0 708 aa21.75■■□□□ 1.07
CBX6-203ENST00000469420 MON2Q7Z3U7 1717 aa21.74■■□□□ 1.07
CBX6-203ENST00000469420 PPIP5K1Q6PFW1 1433 aa21.74■■□□□ 1.07
CBX6-203ENST00000469420 SSH1Q8WYL5 1049 aa21.74■■□□□ 1.07
CBX6-203ENST00000469420 PDZRN3Q9UPQ7 1066 aa21.74■■□□□ 1.07
CBX6-203ENST00000469420 AKAP12Q02952 1782 aa21.73■■□□□ 1.07
CBX6-203ENST00000469420 TNRQ92752 1358 aa21.73■■□□□ 1.07
CBX6-203ENST00000469420 CPS1P31327 1500 aa21.73■■□□□ 1.07
CBX6-203ENST00000469420 IL16Q14005 1332 aa21.73■■□□□ 1.07
CBX6-203ENST00000469420 TRIM27P14373 513 aa21.72■■□□□ 1.07
CBX6-203ENST00000469420 TECPR2O15040 1411 aa21.71■■□□□ 1.07
CBX6-203ENST00000469420 NME9Q86XW9 330 aa21.71■■□□□ 1.07
CBX6-203ENST00000469420 RWDD1Q9H446 243 aaPredicted RBP21.71■■□□□ 1.07
CBX6-203ENST00000469420 ESF1Q9H501 851 aaKnown RBP21.71■■□□□ 1.07
CBX6-203ENST00000469420 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.71■■□□□ 1.07
CBX6-203ENST00000469420 FAM135BQ49AJ0 1406 aa21.7■■□□□ 1.06
CBX6-203ENST00000469420 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.7■■□□□ 1.06
CBX6-203ENST00000469420 ITSN1Q15811 1721 aa21.69■■□□□ 1.06
CBX6-203ENST00000469420 C3P01024 1663 aa21.69■■□□□ 1.06
CBX6-203ENST00000469420 TMEM2Q9UHN6 1383 aa21.69■■□□□ 1.06
CBX6-203ENST00000469420 EMILIN1Q9Y6C2 1016 aa21.69■■□□□ 1.06
CBX6-203ENST00000469420 EDC4Q6P2E9 1401 aaKnown RBP21.69■■□□□ 1.06
CBX6-203ENST00000469420 PRKAR2BP31323 418 aa21.68■■□□□ 1.06
CBX6-203ENST00000469420 NFKBIBQ15653 356 aa21.68■■□□□ 1.06
CBX6-203ENST00000469420 NUDT16Q96DE0 195 aaKnown RBP21.68■■□□□ 1.06
CBX6-203ENST00000469420 ADAMTS13Q76LX8 1427 aa21.68■■□□□ 1.06
CBX6-203ENST00000469420 PRR36Q9H6K5 1346 aa21.68■■□□□ 1.06
CBX6-203ENST00000469420 ATF7IPQ6VMQ6 1270 aa21.68■■□□□ 1.06
CBX6-203ENST00000469420 RSPH6AQ9H0K4 717 aa21.68■■□□□ 1.06
CBX6-203ENST00000469420 PNNQ9H307 717 aaKnown RBP21.68■■□□□ 1.06
CBX6-203ENST00000469420 ROBO2Q9HCK4 1378 aa21.67■■□□□ 1.06
CBX6-203ENST00000469420 ITPRIPQ8IWB1 547 aa21.67■■□□□ 1.06
CBX6-203ENST00000469420 NOB1Q9ULX3 412 aaKnown RBP21.67■■□□□ 1.06
CBX6-203ENST00000469420 FCHSD2O94868 740 aa21.67■■□□□ 1.06
CBX6-203ENST00000469420 DLG5Q8TDM6 1919 aa21.66■■□□□ 1.06
CBX6-203ENST00000469420 LTKP29376 864 aa21.65■■□□□ 1.06
CBX6-203ENST00000469420 PHACTR3Q96KR7 559 aa21.65■■□□□ 1.06
CBX6-203ENST00000469420 HMOX1P09601 288 aa21.64■■□□□ 1.05
CBX6-203ENST00000469420 CEBPAP49715 358 aaPredicted RBP21.64■■□□□ 1.05
CBX6-203ENST00000469420 DDX19BQ9UMR2 479 aa21.64■■□□□ 1.05
CBX6-203ENST00000469420 TMEM57Q8N5G2 664 aa21.63■■□□□ 1.05
CBX6-203ENST00000469420 DNAJC5Q9H3Z4 198 aa21.63■■□□□ 1.05
CBX6-203ENST00000469420 TOPAZ1Q8N9V7 1692 aa21.62■■□□□ 1.05
CBX6-203ENST00000469420 KIF16BQ96L93 1317 aa21.62■■□□□ 1.05
CBX6-203ENST00000469420 SIRT1Q96EB6 747 aa21.62■■□□□ 1.05
CBX6-203ENST00000469420 NRKQ7Z2Y5 1582 aa21.61■■□□□ 1.05
CBX6-203ENST00000469420 CDK12Q9NYV4 1490 aaPredicted RBP21.61■■□□□ 1.05
CBX6-203ENST00000469420 IL13P35225 146 aa21.61■■□□□ 1.05
CBX6-203ENST00000469420 CCDC61Q9Y6R9 512 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms