RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 FRMPD1Q5SYB0 1578 aa12.5□□□□□ -0.41
NUP50-214ENST00000469163 INO80Q9ULG1 1556 aaPredicted RBP12.5□□□□□ -0.41
NUP50-214ENST00000469163 NUDT16Q96DE0 195 aaKnown RBP12.5□□□□□ -0.41
NUP50-214ENST00000469163 CFAP53Q96M91 514 aa12.5□□□□□ -0.41
NUP50-214ENST00000469163 CARD14Q9BXL6 1004 aa12.5□□□□□ -0.41
NUP50-214ENST00000469163 MYCNP04198 464 aaPredicted RBP12.49□□□□□ -0.41
NUP50-214ENST00000469163 FAM193AP78312 1265 aa12.49□□□□□ -0.41
NUP50-214ENST00000469163 KIF20AO95235 890 aa12.49□□□□□ -0.41
NUP50-214ENST00000469163 RIPK4P57078 832 aa12.49□□□□□ -0.41
NUP50-214ENST00000469163 RICTORQ6R327 1708 aa12.49□□□□□ -0.41
NUP50-214ENST00000469163 AMPHP49418 695 aa12.48□□□□□ -0.41
NUP50-214ENST00000469163 ABTB2Q8N961 1025 aa12.48□□□□□ -0.41
NUP50-214ENST00000469163 ERBB4Q15303 1308 aa12.48□□□□□ -0.41
NUP50-214ENST00000469163 PLXNC1O60486 1568 aa12.48□□□□□ -0.41
NUP50-214ENST00000469163 PPP2R1AP30153 589 aa12.48□□□□□ -0.41
NUP50-214ENST00000469163 MYBBP1AQ9BQG0 1328 aaKnown RBP12.47□□□□□ -0.41
NUP50-214ENST00000469163 UHRF1BP1Q6BDS2 1440 aa12.47□□□□□ -0.41
NUP50-214ENST00000469163 ZSCAN20P17040 1043 aaPredicted RBP12.47□□□□□ -0.41
NUP50-214ENST00000469163 ZC3H6P61129 1189 aaKnown RBP12.47□□□□□ -0.41
NUP50-214ENST00000469163 R3HCC1Q9Y3T6 440 aaKnown RBP12.47□□□□□ -0.41
NUP50-214ENST00000469163 KDM5CP41229 1560 aa12.47□□□□□ -0.41
NUP50-214ENST00000469163 RIMS2Q9UQ26 1411 aa12.47□□□□□ -0.41
NUP50-214ENST00000469163 CLUAP1Q96AJ1 413 aa12.46□□□□□ -0.41
NUP50-214ENST00000469163 CGNL1Q0VF96 1302 aa12.46□□□□□ -0.41
NUP50-214ENST00000469163 MAPK8IP3Q9UPT6 1336 aa12.46□□□□□ -0.41
NUP50-214ENST00000469163 CSB-PGBD3P0DP91 1061 aa12.46□□□□□ -0.41
NUP50-214ENST00000469163 CHMP4CQ96CF2 233 aa12.46□□□□□ -0.41
NUP50-214ENST00000469163 EMILIN1Q9Y6C2 1016 aa12.46□□□□□ -0.41
NUP50-214ENST00000469163 RALBP1Q15311 655 aa12.46□□□□□ -0.42
NUP50-214ENST00000469163 TMED8Q6PL24 325 aaPredicted RBP12.46□□□□□ -0.42
NUP50-214ENST00000469163 CABLES1Q8TDN4 633 aa12.46□□□□□ -0.42
NUP50-214ENST00000469163 COG3Q96JB2 828 aa12.46□□□□□ -0.42
NUP50-214ENST00000469163 MLH3Q9UHC1 1453 aa12.46□□□□□ -0.42
NUP50-214ENST00000469163 ZBTB9Q96C00 473 aa12.45□□□□□ -0.42
NUP50-214ENST00000469163 NECTIN2Q92692 538 aa12.45□□□□□ -0.42
NUP50-214ENST00000469163 CFAP74Q9C0B2 1584 aa12.45□□□□□ -0.42
NUP50-214ENST00000469163 METP08581 1390 aa12.45□□□□□ -0.42
NUP50-214ENST00000469163 USHBP1Q8N6Y0 703 aa12.45□□□□□ -0.42
NUP50-214ENST00000469163 HECW2Q9P2P5 1572 aa12.44□□□□□ -0.42
NUP50-214ENST00000469163 MTERF4Q7Z6M4 381 aaKnown RBP12.44□□□□□ -0.42
NUP50-214ENST00000469163 THUMPD2Q9BTF0 503 aaKnown RBP12.44□□□□□ -0.42
NUP50-214ENST00000469163 ABCA6Q8N139 1617 aa12.44□□□□□ -0.42
NUP50-214ENST00000469163 NSD3Q9BZ95 1437 aa12.44□□□□□ -0.42
NUP50-214ENST00000469163 SIGLEC1Q9BZZ2 1709 aa12.44□□□□□ -0.42
NUP50-214ENST00000469163 LETM1O95202 739 aaPredicted RBP12.44□□□□□ -0.42
NUP50-214ENST00000469163 ATF3P18847 181 aa12.44□□□□□ -0.42
NUP50-214ENST00000469163 ORAI2Q96SN7 254 aa12.43□□□□□ -0.42
NUP50-214ENST00000469163 CLGNO14967 610 aa12.43□□□□□ -0.42
NUP50-214ENST00000469163 CBX1P83916 185 aa12.42□□□□□ -0.42
NUP50-214ENST00000469163 NUDCQ9Y266 331 aa12.42□□□□□ -0.42
NUP50-214ENST00000469163 RPGRIP1LQ68CZ1 1315 aa12.42□□□□□ -0.42
NUP50-214ENST00000469163 WASLO00401 505 aaPredicted RBP12.42□□□□□ -0.42
NUP50-214ENST00000469163 NGEFQ8N5V2 710 aa12.42□□□□□ -0.42
NUP50-214ENST00000469163 UQCRHLA0A096LP55 91 aa12.41□□□□□ -0.42
NUP50-214ENST00000469163 UQCRHP07919 91 aa12.41□□□□□ -0.42
NUP50-214ENST00000469163 SLKQ9H2G2 1235 aaPredicted RBP12.41□□□□□ -0.42
NUP50-214ENST00000469163 CCDC9Q9Y3X0 531 aaKnown RBP12.41□□□□□ -0.42
NUP50-214ENST00000469163 CCDC61Q9Y6R9 512 aa12.41□□□□□ -0.42
NUP50-214ENST00000469163 TAF3Q5VWG9 929 aa12.41□□□□□ -0.42
NUP50-214ENST00000469163 GTPBP4Q9BZE4 634 aaKnown RBP12.41□□□□□ -0.42
NUP50-214ENST00000469163 NUTM2BA6NNL0 878 aaPredicted RBP12.41□□□□□ -0.42
NUP50-214ENST00000469163 NUTM2EB1AL46 878 aaPredicted RBP12.41□□□□□ -0.42
NUP50-214ENST00000469163 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.41□□□□□ -0.42
NUP50-214ENST00000469163 NUTM2AQ8IVF1 878 aaPredicted RBP12.41□□□□□ -0.42
NUP50-214ENST00000469163 PNISRQ8TF01 805 aaKnown RBP12.41□□□□□ -0.42
NUP50-214ENST00000469163 SPATA31E1Q6ZUB1 1445 aa12.4□□□□□ -0.42
NUP50-214ENST00000469163 IGSF3O75054 1194 aa12.4□□□□□ -0.42
NUP50-214ENST00000469163 DCTN1Q14203 1278 aa12.4□□□□□ -0.42
NUP50-214ENST00000469163 MROH1Q8NDA8 1641 aa12.39□□□□□ -0.43
NUP50-214ENST00000469163 MS4A1P11836 297 aa12.39□□□□□ -0.43
NUP50-214ENST00000469163 MSNP26038 577 aaKnown RBP12.39□□□□□ -0.43
NUP50-214ENST00000469163 SCAF11Q99590 1463 aaKnown RBP12.39□□□□□ -0.43
NUP50-214ENST00000469163 CEP152O94986 1710 aa12.39□□□□□ -0.43
NUP50-214ENST00000469163 DIP2CQ9Y2E4 1556 aa12.39□□□□□ -0.43
NUP50-214ENST00000469163 ACEP12821 1306 aa12.39□□□□□ -0.43
NUP50-214ENST00000469163 KCNJ4P48050 445 aa12.38□□□□□ -0.43
NUP50-214ENST00000469163 CCDC94Q9BW85 323 aaPredicted RBP12.38□□□□□ -0.43
NUP50-214ENST00000469163 ABCC3O15438 1527 aa12.38□□□□□ -0.43
NUP50-214ENST00000469163 UNC13BO14795 1591 aa12.38□□□□□ -0.43
NUP50-214ENST00000469163 CHRNA2Q15822 529 aa12.38□□□□□ -0.43
NUP50-214ENST00000469163 CFAP44Q96MT7 982 aa12.38□□□□□ -0.43
NUP50-214ENST00000469163 ZNF330Q9Y3S2 320 aaPredicted RBP12.38□□□□□ -0.43
NUP50-214ENST00000469163 MRE11P49959 708 aa12.38□□□□□ -0.43
NUP50-214ENST00000469163 TSR2Q969E8 191 aaKnown RBP12.38□□□□□ -0.43
NUP50-214ENST00000469163 MIS18AQ9NYP9 233 aa12.38□□□□□ -0.43
NUP50-214ENST00000469163 PPP6R1Q9UPN7 881 aa12.38□□□□□ -0.43
NUP50-214ENST00000469163 RALGAPBQ86X10 1494 aa12.38□□□□□ -0.43
NUP50-214ENST00000469163 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.37□□□□□ -0.43
NUP50-214ENST00000469163 PER1O15534 1290 aaPredicted RBP12.37□□□□□ -0.43
NUP50-214ENST00000469163 STRN4Q9NRL3 753 aa12.37□□□□□ -0.43
NUP50-214ENST00000469163 PTMAP06454 111 aaKnown RBP12.37□□□□□ -0.43
NUP50-214ENST00000469163 PTMSP20962 102 aa12.37□□□□□ -0.43
NUP50-214ENST00000469163 SKAP1Q86WV1 359 aa12.37□□□□□ -0.43
NUP50-214ENST00000469163 FYB1O15117 783 aa12.37□□□□□ -0.43
NUP50-214ENST00000469163 MAGI2Q86UL8 1455 aa12.37□□□□□ -0.43
NUP50-214ENST00000469163 ZNF771Q7L3S4 317 aaPredicted RBP12.36□□□□□ -0.43
NUP50-214ENST00000469163 KDM5DQ9BY66 1539 aa12.36□□□□□ -0.43
NUP50-214ENST00000469163 DEPDC5O75140 1603 aa12.36□□□□□ -0.43
NUP50-214ENST00000469163 CLTCL1P53675 1640 aa12.36□□□□□ -0.43
NUP50-214ENST00000469163 DIAPH1O60610 1272 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms