RNA–Protein interactions for RNA: ENST00000468892.5

ABCF3-207, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 1,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-207ENST00000468892 ADAMTS8Q9UP79 889 aa24.92■■□□□ 1.58
ABCF3-207ENST00000468892 C19orf44Q9H6X5 657 aa24.91■■□□□ 1.58
ABCF3-207ENST00000468892 NME9Q86XW9 330 aa24.9■■□□□ 1.58
ABCF3-207ENST00000468892 PMFBP1Q8TBY8 1022 aa24.9■■□□□ 1.58
ABCF3-207ENST00000468892 PHF8Q9UPP1 1060 aa24.89■■□□□ 1.57
ABCF3-207ENST00000468892 NUDCQ9Y266 331 aa24.89■■□□□ 1.57
ABCF3-207ENST00000468892 DMRT2Q9Y5R5 561 aa24.89■■□□□ 1.57
ABCF3-207ENST00000468892 NRKQ7Z2Y5 1582 aa24.88■■□□□ 1.57
ABCF3-207ENST00000468892 AATKQ6ZMQ8 1374 aa24.88■■□□□ 1.57
ABCF3-207ENST00000468892 RGPD8O14715 1765 aaPredicted RBP24.86■■□□□ 1.57
ABCF3-207ENST00000468892 NGEFQ8N5V2 710 aa24.86■■□□□ 1.57
ABCF3-207ENST00000468892 STRCQ7RTU9 1775 aa24.86■■□□□ 1.57
ABCF3-207ENST00000468892 DCCP43146 1447 aa24.86■■□□□ 1.57
ABCF3-207ENST00000468892 SSH2Q76I76 1423 aa24.86■■□□□ 1.57
ABCF3-207ENST00000468892 RBM33Q96EV2 1170 aaKnown RBP24.85■■□□□ 1.57
ABCF3-207ENST00000468892 ATF3P18847 181 aa24.84■■□□□ 1.57
ABCF3-207ENST00000468892 PDE3BQ13370 1112 aa24.83■■□□□ 1.57
ABCF3-207ENST00000468892 TMEM94Q12767 1356 aa24.83■■□□□ 1.57
ABCF3-207ENST00000468892 ESCO1Q5FWF5 840 aa24.82■■□□□ 1.56
ABCF3-207ENST00000468892 USP31Q70CQ4 1352 aa24.8■■□□□ 1.56
ABCF3-207ENST00000468892 PNPLA6Q8IY17 1366 aa24.8■■□□□ 1.56
ABCF3-207ENST00000468892 PNNQ9H307 717 aaKnown RBP24.8■■□□□ 1.56
ABCF3-207ENST00000468892 POLKQ9UBT6 870 aa24.8■■□□□ 1.56
ABCF3-207ENST00000468892 OVOS2A0A0J9YW53 1432 aa24.79■■□□□ 1.56
ABCF3-207ENST00000468892 OVOS2Q6IE36 1432 aa24.79■■□□□ 1.56
ABCF3-207ENST00000468892 CADPS2Q86UW7 1296 aa24.79■■□□□ 1.56
ABCF3-207ENST00000468892 MSH6P52701 1360 aa24.78■■□□□ 1.56
ABCF3-207ENST00000468892 DIAPH1O60610 1272 aaKnown RBP24.78■■□□□ 1.56
ABCF3-207ENST00000468892 PSME1Q06323 249 aa24.78■■□□□ 1.56
ABCF3-207ENST00000468892 SMG6Q86US8 1419 aaKnown RBP24.77■■□□□ 1.56
ABCF3-207ENST00000468892 STRCP1A6NGW2 1772 aa24.77■■□□□ 1.56
ABCF3-207ENST00000468892 SHPRHQ149N8 1683 aa24.77■■□□□ 1.56
ABCF3-207ENST00000468892 GTF3C3Q9Y5Q9 886 aa24.77■■□□□ 1.56
ABCF3-207ENST00000468892 ZRANB1Q9UGI0 708 aa24.76■■□□□ 1.55
ABCF3-207ENST00000468892 CDK12Q9NYV4 1490 aaPredicted RBP24.75■■□□□ 1.55
ABCF3-207ENST00000468892 U2AF1L5P0DN76 240 aaPredicted RBP24.75■■□□□ 1.55
ABCF3-207ENST00000468892 U2AF1Q01081 240 aaKnown RBP eCLIP24.75■■□□□ 1.55
ABCF3-207ENST00000468892 RUNDC1Q96C34 613 aa24.75■■□□□ 1.55
ABCF3-207ENST00000468892 KIF1AQ12756 1690 aa24.75■■□□□ 1.55
ABCF3-207ENST00000468892 C1orf167Q5SNV9 1468 aa24.74■■□□□ 1.55
ABCF3-207ENST00000468892 PPM1GO15355 546 aaPredicted RBP24.74■■□□□ 1.55
ABCF3-207ENST00000468892 COL3A1P02461 1466 aaPredicted RBP24.74■■□□□ 1.55
ABCF3-207ENST00000468892 MAP2P11137 1827 aaKnown RBP24.73■■□□□ 1.55
ABCF3-207ENST00000468892 PAK3O75914 559 aaPredicted RBP24.72■■□□□ 1.55
ABCF3-207ENST00000468892 NLRP6P59044 892 aa24.72■■□□□ 1.55
ABCF3-207ENST00000468892 U2SURPO15042 1029 aaKnown RBP24.71■■□□□ 1.55
ABCF3-207ENST00000468892 ABTB2Q8N961 1025 aa24.71■■□□□ 1.55
ABCF3-207ENST00000468892 LRRC7Q96NW7 1537 aa24.71■■□□□ 1.55
ABCF3-207ENST00000468892 NCBP3Q53F19 620 aaKnown RBP24.7■■□□□ 1.55
ABCF3-207ENST00000468892 CCDC146Q8IYE0 955 aa24.7■■□□□ 1.55
ABCF3-207ENST00000468892 NEFLP07196 543 aa24.69■■□□□ 1.54
ABCF3-207ENST00000468892 MST1RQ04912 1400 aa24.69■■□□□ 1.54
ABCF3-207ENST00000468892 ORAI2Q96SN7 254 aa24.68■■□□□ 1.54
ABCF3-207ENST00000468892 SALL2Q9Y467 1007 aaPredicted RBP24.68■■□□□ 1.54
ABCF3-207ENST00000468892 EMILIN1Q9Y6C2 1016 aa24.68■■□□□ 1.54
ABCF3-207ENST00000468892 PIK3C2AO00443 1686 aa24.68■■□□□ 1.54
ABCF3-207ENST00000468892 USP54Q70EL1 1684 aa24.68■■□□□ 1.54
ABCF3-207ENST00000468892 APAF1O14727 1248 aa24.67■■□□□ 1.54
ABCF3-207ENST00000468892 NEFMP07197 916 aa24.67■■□□□ 1.54
ABCF3-207ENST00000468892 FBXO41Q8TF61 875 aa24.67■■□□□ 1.54
ABCF3-207ENST00000468892 ZNF335Q9H4Z2 1342 aaPredicted RBP24.66■■□□□ 1.54
ABCF3-207ENST00000468892 RRS1Q15050 365 aaKnown RBP24.66■■□□□ 1.54
ABCF3-207ENST00000468892 KIF24Q5T7B8 1368 aa24.65■■□□□ 1.54
ABCF3-207ENST00000468892 FOXO3O43524 673 aa24.65■■□□□ 1.54
ABCF3-207ENST00000468892 FCHSD2O94868 740 aa24.65■■□□□ 1.54
ABCF3-207ENST00000468892 FBLN1P23142 703 aa24.64■■□□□ 1.53
ABCF3-207ENST00000468892 MAPK8IP3Q9UPT6 1336 aa24.64■■□□□ 1.53
ABCF3-207ENST00000468892 KRT28Q7Z3Y7 464 aa24.63■■□□□ 1.53
ABCF3-207ENST00000468892 KCNH5Q8NCM2 988 aa24.63■■□□□ 1.53
ABCF3-207ENST00000468892 SENP3-EIF4A1A0A087X0R7 540 aa24.62■■□□□ 1.53
ABCF3-207ENST00000468892 GOLGA2Q08379 1002 aa24.62■■□□□ 1.53
ABCF3-207ENST00000468892 SBNO1A3KN83 1393 aa24.62■■□□□ 1.53
ABCF3-207ENST00000468892 IL13P35225 146 aa24.61■■□□□ 1.53
ABCF3-207ENST00000468892 TCP11L2Q8N4U5 519 aa24.61■■□□□ 1.53
ABCF3-207ENST00000468892 NPHP3Q7Z494 1330 aa24.61■■□□□ 1.53
ABCF3-207ENST00000468892 AMPHP49418 695 aa24.6■■□□□ 1.53
ABCF3-207ENST00000468892 FLT4P35916 1363 aa24.6■■□□□ 1.53
ABCF3-207ENST00000468892 CCDC27Q2M243 656 aa24.59■■□□□ 1.53
ABCF3-207ENST00000468892 XIRP1Q702N8 1843 aaKnown RBP24.59■■□□□ 1.53
ABCF3-207ENST00000468892 ZNF521Q96K83 1311 aa24.59■■□□□ 1.53
ABCF3-207ENST00000468892 MAP3K19Q56UN5 1328 aa24.58■■□□□ 1.53
ABCF3-207ENST00000468892 IQSEC2Q5JU85 1478 aa24.58■■□□□ 1.52
ABCF3-207ENST00000468892 SOX12O15370 315 aa24.57■■□□□ 1.52
ABCF3-207ENST00000468892 NUTM2GQ5VZR2 741 aa24.57■■□□□ 1.52
ABCF3-207ENST00000468892 PLEKHF1Q96S99 279 aa24.56■■□□□ 1.52
ABCF3-207ENST00000468892 SUPT16HQ9Y5B9 1047 aaKnown RBP24.56■■□□□ 1.52
ABCF3-207ENST00000468892 RTL1A6NKG5 1358 aa24.56■■□□□ 1.52
ABCF3-207ENST00000468892 E9PSI1 815 aa24.54■■□□□ 1.52
ABCF3-207ENST00000468892 TRPM3Q9HCF6 1732 aaPredicted RBP24.54■■□□□ 1.52
ABCF3-207ENST00000468892 EIF4A2Q14240 407 aaKnown RBP24.54■■□□□ 1.52
ABCF3-207ENST00000468892 WDR63Q8IWG1 891 aa24.54■■□□□ 1.52
ABCF3-207ENST00000468892 RSPH6AQ9H0K4 717 aa24.54■■□□□ 1.52
ABCF3-207ENST00000468892 SLAIN2Q9P270 581 aa24.54■■□□□ 1.52
ABCF3-207ENST00000468892 LMOD2Q6P5Q4 547 aa24.53■■□□□ 1.52
ABCF3-207ENST00000468892 WWC1Q8IX03 1113 aa24.53■■□□□ 1.52
ABCF3-207ENST00000468892 MARF1Q9Y4F3 1742 aaKnown RBP24.52■■□□□ 1.52
ABCF3-207ENST00000468892 XPCQ01831 940 aaPredicted RBP24.52■■□□□ 1.52
ABCF3-207ENST00000468892 CDCA7LQ96GN5 454 aa24.52■■□□□ 1.52
ABCF3-207ENST00000468892 PRKAR2BP31323 418 aa24.51■■□□□ 1.51
ABCF3-207ENST00000468892 SLFN5Q08AF3 891 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms