RNA–Protein interactions for RNA: ENST00000468864.1

TRAPPC10-207, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 3,909 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-207ENST00000468864 RBM27Q9P2N5 1060 aaKnown RBP12.79□□□□□ -0.36
TRAPPC10-207ENST00000468864 RBM42Q9BTD8 480 aaKnown RBP12.78□□□□□ -0.36
TRAPPC10-207ENST00000468864 TSPYL4Q9UJ04 414 aa12.78□□□□□ -0.36
TRAPPC10-207ENST00000468864 CEBPZQ03701 1054 aaKnown RBP12.78□□□□□ -0.36
TRAPPC10-207ENST00000468864 SURF6O75683 361 aaKnown RBP12.77□□□□□ -0.36
TRAPPC10-207ENST00000468864 MAP4K4O95819 1239 aaPredicted RBP12.77□□□□□ -0.36
TRAPPC10-207ENST00000468864 C9orf78Q9NZ63 289 aaPredicted RBP12.77□□□□□ -0.36
TRAPPC10-207ENST00000468864 ADAMTS12P58397 1594 aa12.77□□□□□ -0.37
TRAPPC10-207ENST00000468864 SMARCA5O60264 1052 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC10-207ENST00000468864 IFIT2P09913 472 aaKnown RBP12.77□□□□□ -0.37
TRAPPC10-207ENST00000468864 TRIM27P14373 513 aa12.77□□□□□ -0.37
TRAPPC10-207ENST00000468864 RUFY2Q8WXA3 655 aa12.77□□□□□ -0.37
TRAPPC10-207ENST00000468864 CWC22Q9HCG8 908 aaKnown RBP12.76□□□□□ -0.37
TRAPPC10-207ENST00000468864 ERC2O15083 957 aa12.76□□□□□ -0.37
TRAPPC10-207ENST00000468864 TMPOP42166 694 aaKnown RBP12.76□□□□□ -0.37
TRAPPC10-207ENST00000468864 RPRD2Q5VT52 1461 aaKnown RBP12.76□□□□□ -0.37
TRAPPC10-207ENST00000468864 TOMM22Q9NS69 142 aa12.76□□□□□ -0.37
TRAPPC10-207ENST00000468864 PES1O00541 588 aaKnown RBP12.75□□□□□ -0.37
TRAPPC10-207ENST00000468864 GOLGA6L1Q8N7Z2 621 aa12.75□□□□□ -0.37
TRAPPC10-207ENST00000468864 SPINK5Q9NQ38 1064 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC10-207ENST00000468864 BAG4O95429 457 aaKnown RBP12.75□□□□□ -0.37
TRAPPC10-207ENST00000468864 NKTRP30414 1462 aaKnown RBP12.75□□□□□ -0.37
TRAPPC10-207ENST00000468864 C9orf84Q5VXU9 1444 aa12.75□□□□□ -0.37
TRAPPC10-207ENST00000468864 LARP6Q9BRS8 491 aaKnown RBP12.75□□□□□ -0.37
TRAPPC10-207ENST00000468864 USP25Q9UHP3 1055 aa12.75□□□□□ -0.37
TRAPPC10-207ENST00000468864 KIF3AQ9Y496 699 aa12.75□□□□□ -0.37
TRAPPC10-207ENST00000468864 CDK13Q14004 1512 aaKnown RBP12.75□□□□□ -0.37
TRAPPC10-207ENST00000468864 SLC4A2P04920 1241 aa12.74□□□□□ -0.37
TRAPPC10-207ENST00000468864 RLBP1P12271 317 aa12.74□□□□□ -0.37
TRAPPC10-207ENST00000468864 SDF4Q9BRK5 362 aa12.74□□□□□ -0.37
TRAPPC10-207ENST00000468864 DDX54Q8TDD1 881 aaKnown RBP12.74□□□□□ -0.37
TRAPPC10-207ENST00000468864 IL1RAPL2Q9NP60 686 aa12.74□□□□□ -0.37
TRAPPC10-207ENST00000468864 EXOC6BQ9Y2D4 811 aa12.74□□□□□ -0.37
TRAPPC10-207ENST00000468864 FERMT3Q86UX7 667 aa12.73□□□□□ -0.37
TRAPPC10-207ENST00000468864 DISP3Q9P2K9 1392 aa12.73□□□□□ -0.37
TRAPPC10-207ENST00000468864 MNS1Q8NEH6 495 aa12.73□□□□□ -0.37
TRAPPC10-207ENST00000468864 ZNF830Q96NB3 372 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC10-207ENST00000468864 PDCL2Q8N4E4 241 aa12.73□□□□□ -0.37
TRAPPC10-207ENST00000468864 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC10-207ENST00000468864 GCC2Q8IWJ2 1684 aa12.73□□□□□ -0.37
TRAPPC10-207ENST00000468864 UBTFL1P0CB47 393 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC10-207ENST00000468864 HDGFP51858 240 aaKnown RBP12.72□□□□□ -0.37
TRAPPC10-207ENST00000468864 CCDC73Q6ZRK6 1079 aa12.72□□□□□ -0.37
TRAPPC10-207ENST00000468864 TBC1D9Q6ZT07 1266 aa12.72□□□□□ -0.37
TRAPPC10-207ENST00000468864 NINLQ9Y2I6 1382 aa12.72□□□□□ -0.37
TRAPPC10-207ENST00000468864 SPDYE4A6NLX3 237 aa12.72□□□□□ -0.37
TRAPPC10-207ENST00000468864 ABCC5O15440 1437 aa12.72□□□□□ -0.37
TRAPPC10-207ENST00000468864 KDM4AO75164 1064 aa12.72□□□□□ -0.37
TRAPPC10-207ENST00000468864 MCM2P49736 904 aa12.72□□□□□ -0.37
TRAPPC10-207ENST00000468864 TEFQ10587 303 aa12.72□□□□□ -0.37
TRAPPC10-207ENST00000468864 DCTN1Q14203 1278 aa12.72□□□□□ -0.37
TRAPPC10-207ENST00000468864 FILIP1Q7Z7B0 1213 aa12.72□□□□□ -0.37
TRAPPC10-207ENST00000468864 ROCK1Q13464 1354 aa12.72□□□□□ -0.37
TRAPPC10-207ENST00000468864 STK3Q13188 491 aa12.71□□□□□ -0.37
TRAPPC10-207ENST00000468864 EHBP1L1Q8N3D4 1523 aa12.71□□□□□ -0.37
TRAPPC10-207ENST00000468864 PLEKHH1Q9ULM0 1364 aa12.71□□□□□ -0.37
TRAPPC10-207ENST00000468864 ERICH4A6NGS2 130 aa12.71□□□□□ -0.37
TRAPPC10-207ENST00000468864 CCDC112Q8NEF3 446 aa12.71□□□□□ -0.37
TRAPPC10-207ENST00000468864 WDR33Q9C0J8 1336 aaKnown RBP12.71□□□□□ -0.38
TRAPPC10-207ENST00000468864 TPM3P06753 285 aa12.7□□□□□ -0.38
TRAPPC10-207ENST00000468864 SKIDA1Q1XH10 827 aa12.7□□□□□ -0.38
TRAPPC10-207ENST00000468864 HDAC5Q9UQL6 1122 aa12.7□□□□□ -0.38
TRAPPC10-207ENST00000468864 TEX35Q5T0J7 233 aa12.7□□□□□ -0.38
TRAPPC10-207ENST00000468864 STAC3Q96MF2 364 aa12.7□□□□□ -0.38
TRAPPC10-207ENST00000468864 CAMK4Q16566 473 aa12.7□□□□□ -0.38
TRAPPC10-207ENST00000468864 TAF7LQ5H9L4 462 aa12.7□□□□□ -0.38
TRAPPC10-207ENST00000468864 CABP1Q9NZU7 370 aa12.7□□□□□ -0.38
TRAPPC10-207ENST00000468864 ADCY10Q96PN6 1610 aa12.7□□□□□ -0.38
TRAPPC10-207ENST00000468864 RNF123Q5XPI4 1314 aa12.7□□□□□ -0.38
TRAPPC10-207ENST00000468864 DHX29Q7Z478 1369 aaKnown RBP12.7□□□□□ -0.38
TRAPPC10-207ENST00000468864 IGSF3O75054 1194 aa12.69□□□□□ -0.38
TRAPPC10-207ENST00000468864 CCDC192P0DO97 292 aa12.69□□□□□ -0.38
TRAPPC10-207ENST00000468864 CSB-PGBD3P0DP91 1061 aa12.69□□□□□ -0.38
TRAPPC10-207ENST00000468864 RNF20Q5VTR2 975 aa12.69□□□□□ -0.38
TRAPPC10-207ENST00000468864 RASSF8Q8NHQ8 419 aa12.69□□□□□ -0.38
TRAPPC10-207ENST00000468864 TRERF1Q96PN7 1200 aa12.69□□□□□ -0.38
TRAPPC10-207ENST00000468864 PTPN23Q9H3S7 1636 aa12.69□□□□□ -0.38
TRAPPC10-207ENST00000468864 KLHL40Q2TBA0 621 aa12.69□□□□□ -0.38
TRAPPC10-207ENST00000468864 NUTM2GQ5VZR2 741 aa12.69□□□□□ -0.38
TRAPPC10-207ENST00000468864 SULT6B1Q6IMI4 303 aa12.69□□□□□ -0.38
TRAPPC10-207ENST00000468864 CPLX1O14810 134 aa12.69□□□□□ -0.38
TRAPPC10-207ENST00000468864 PDIA4P13667 645 aaKnown RBP12.69□□□□□ -0.38
TRAPPC10-207ENST00000468864 AIMP1Q12904 312 aaKnown RBP12.69□□□□□ -0.38
TRAPPC10-207ENST00000468864 PRAM1Q96QH2 718 aa12.69□□□□□ -0.38
TRAPPC10-207ENST00000468864 MIS18AQ9NYP9 233 aa12.69□□□□□ -0.38
TRAPPC10-207ENST00000468864 CT47B1P0C2W7 299 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC10-207ENST00000468864 G3BP1Q13283 466 aaKnown RBP eCLIP12.68□□□□□ -0.38
TRAPPC10-207ENST00000468864 TSHZ3Q63HK5 1081 aa12.68□□□□□ -0.38
TRAPPC10-207ENST00000468864 FAM177A1Q8N128 213 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC10-207ENST00000468864 NSD3Q9BZ95 1437 aa12.68□□□□□ -0.38
TRAPPC10-207ENST00000468864 GRIN2BQ13224 1484 aa12.68□□□□□ -0.38
TRAPPC10-207ENST00000468864 EIF4G3O43432 1585 aaKnown RBP12.68□□□□□ -0.38
TRAPPC10-207ENST00000468864 FAM177BA6PVY3 158 aa12.68□□□□□ -0.38
TRAPPC10-207ENST00000468864 SMC2O95347 1197 aa12.68□□□□□ -0.38
TRAPPC10-207ENST00000468864 ZSCAN23Q3MJ62 389 aa12.68□□□□□ -0.38
TRAPPC10-207ENST00000468864 CLASRPQ8N2M8 674 aaKnown RBP12.68□□□□□ -0.38
TRAPPC10-207ENST00000468864 GAS2L2Q8NHY3 880 aa12.68□□□□□ -0.38
TRAPPC10-207ENST00000468864 TNMDQ9H2S6 317 aa12.68□□□□□ -0.38
TRAPPC10-207ENST00000468864 GNAI2P04899 355 aa12.67□□□□□ -0.38
TRAPPC10-207ENST00000468864 LARP1BQ659C4 914 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms