RNA–Protein interactions for RNA: ENST00000468753.5

COL4A3-203, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 660 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-203ENST00000468753 PHF8Q9UPP1 1060 aa12.29□□□□□ -0.44
COL4A3-203ENST00000468753 PRR36Q9H6K5 1346 aa12.29□□□□□ -0.44
COL4A3-203ENST00000468753 COL22A1Q8NFW1 1626 aaPredicted RBP12.29□□□□□ -0.44
COL4A3-203ENST00000468753 POTEAQ6S8J7 498 aa12.28□□□□□ -0.44
COL4A3-203ENST00000468753 EIF3AQ14152 1382 aaKnown RBP12.28□□□□□ -0.44
COL4A3-203ENST00000468753 SPDYE4A6NLX3 237 aa12.27□□□□□ -0.45
COL4A3-203ENST00000468753 NUTM2BA6NNL0 878 aaPredicted RBP12.27□□□□□ -0.45
COL4A3-203ENST00000468753 NUTM2EB1AL46 878 aaPredicted RBP12.27□□□□□ -0.45
COL4A3-203ENST00000468753 SOCS7O14512 581 aa12.27□□□□□ -0.45
COL4A3-203ENST00000468753 XPCQ01831 940 aaPredicted RBP12.27□□□□□ -0.45
COL4A3-203ENST00000468753 NUTM2AQ8IVF1 878 aaPredicted RBP12.27□□□□□ -0.45
COL4A3-203ENST00000468753 NBPF8Q3BBV2 869 aa12.26□□□□□ -0.45
COL4A3-203ENST00000468753 ATP7BP35670 1465 aa12.26□□□□□ -0.45
COL4A3-203ENST00000468753 MEX3CQ5U5Q3 659 aaKnown RBP12.25□□□□□ -0.45
COL4A3-203ENST00000468753 KRT28Q7Z3Y7 464 aa12.25□□□□□ -0.45
COL4A3-203ENST00000468753 SPATA31A3Q5VYP0 1347 aa12.25□□□□□ -0.45
COL4A3-203ENST00000468753 GPRASP1Q5JY77 1395 aa12.25□□□□□ -0.45
COL4A3-203ENST00000468753 SBNO1A3KN83 1393 aa12.24□□□□□ -0.45
COL4A3-203ENST00000468753 TONSLQ96HA7 1378 aa12.24□□□□□ -0.45
COL4A3-203ENST00000468753 CENPJQ9HC77 1338 aaPredicted RBP12.24□□□□□ -0.45
COL4A3-203ENST00000468753 TNS3Q68CZ2 1445 aa12.23□□□□□ -0.45
COL4A3-203ENST00000468753 ROCK2O75116 1388 aaKnown RBP12.23□□□□□ -0.45
COL4A3-203ENST00000468753 PMFBP1Q8TBY8 1022 aa12.23□□□□□ -0.45
COL4A3-203ENST00000468753 NUDT16Q96DE0 195 aaKnown RBP12.23□□□□□ -0.45
COL4A3-203ENST00000468753 CDK19Q9BWU1 502 aa12.23□□□□□ -0.45
COL4A3-203ENST00000468753 FARP1Q9Y4F1 1045 aaPredicted RBP12.23□□□□□ -0.45
COL4A3-203ENST00000468753 TRPM3Q9HCF6 1732 aaPredicted RBP12.23□□□□□ -0.45
COL4A3-203ENST00000468753 TOPAZ1Q8N9V7 1692 aa12.22□□□□□ -0.45
COL4A3-203ENST00000468753 QRICH2Q9H0J4 1663 aa12.22□□□□□ -0.45
COL4A3-203ENST00000468753 RALGAPBQ86X10 1494 aa12.22□□□□□ -0.45
COL4A3-203ENST00000468753 ITSN1Q15811 1721 aa12.22□□□□□ -0.45
COL4A3-203ENST00000468753 AFF2P51816 1311 aa12.21□□□□□ -0.45
COL4A3-203ENST00000468753 PSME1Q06323 249 aa12.21□□□□□ -0.45
COL4A3-203ENST00000468753 ZNF772Q68DY9 489 aaPredicted RBP12.21□□□□□ -0.45
COL4A3-203ENST00000468753 C8orf37Q96NL8 207 aa12.21□□□□□ -0.45
COL4A3-203ENST00000468753 DCBLD2Q96PD2 775 aa12.21□□□□□ -0.45
COL4A3-203ENST00000468753 ADAMTS2O95450 1211 aa12.2□□□□□ -0.46
COL4A3-203ENST00000468753 PCGF6Q9BYE7 350 aa12.2□□□□□ -0.46
COL4A3-203ENST00000468753 ALS2Q96Q42 1657 aa12.19□□□□□ -0.46
COL4A3-203ENST00000468753 POLR3AO14802 1390 aaPredicted RBP12.19□□□□□ -0.46
COL4A3-203ENST00000468753 PLEKHG3A1L390 1219 aa12.19□□□□□ -0.46
COL4A3-203ENST00000468753 MARF1Q9Y4F3 1742 aaKnown RBP12.19□□□□□ -0.46
COL4A3-203ENST00000468753 ARHGEF10O15013 1369 aa12.18□□□□□ -0.46
COL4A3-203ENST00000468753 FNBP4Q8N3X1 1017 aaPredicted RBP12.18□□□□□ -0.46
COL4A3-203ENST00000468753 CCDC61Q9Y6R9 512 aa12.18□□□□□ -0.46
COL4A3-203ENST00000468753 ABCA3Q99758 1704 aa12.17□□□□□ -0.46
COL4A3-203ENST00000468753 CLSPNQ9HAW4 1339 aa12.17□□□□□ -0.46
COL4A3-203ENST00000468753 NGDNQ8NEJ9 315 aaKnown RBP12.17□□□□□ -0.46
COL4A3-203ENST00000468753 NGLY1Q96IV0 654 aa12.17□□□□□ -0.46
COL4A3-203ENST00000468753 CABP2Q9NPB3 220 aa12.17□□□□□ -0.46
COL4A3-203ENST00000468753 SBNO2Q9Y2G9 1366 aa12.17□□□□□ -0.46
COL4A3-203ENST00000468753 SRPK2P78362 688 aaKnown RBP12.16□□□□□ -0.46
COL4A3-203ENST00000468753 CARD11Q9BXL7 1154 aa12.16□□□□□ -0.46
COL4A3-203ENST00000468753 BCL9LQ86UU0 1499 aa12.15□□□□□ -0.46
COL4A3-203ENST00000468753 ACEP12821 1306 aa12.15□□□□□ -0.46
COL4A3-203ENST00000468753 EVC2Q86UK5 1308 aa12.15□□□□□ -0.46
COL4A3-203ENST00000468753 PPIP5K1Q6PFW1 1433 aa12.15□□□□□ -0.46
COL4A3-203ENST00000468753 CABLES1Q8TDN4 633 aa12.15□□□□□ -0.46
COL4A3-203ENST00000468753 CREBZFQ9NS37 354 aa12.15□□□□□ -0.46
COL4A3-203ENST00000468753 CDK12Q9NYV4 1490 aaPredicted RBP12.14□□□□□ -0.47
COL4A3-203ENST00000468753 CRYBG1Q9Y4K1 1723 aa12.14□□□□□ -0.47
COL4A3-203ENST00000468753 ATRNO75882 1429 aa12.14□□□□□ -0.47
COL4A3-203ENST00000468753 RXRBP28702 533 aa12.14□□□□□ -0.47
COL4A3-203ENST00000468753 ZNF579Q8NAF0 562 aaKnown RBP12.14□□□□□ -0.47
COL4A3-203ENST00000468753 QTRT2Q9H974 415 aaKnown RBP12.14□□□□□ -0.47
COL4A3-203ENST00000468753 USP21Q9UK80 565 aa12.14□□□□□ -0.47
COL4A3-203ENST00000468753 SLIT2O94813 1529 aa12.14□□□□□ -0.47
COL4A3-203ENST00000468753 LMOD2Q6P5Q4 547 aa12.13□□□□□ -0.47
COL4A3-203ENST00000468753 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.12□□□□□ -0.47
COL4A3-203ENST00000468753 RBM6P78332 1123 aaKnown RBP12.12□□□□□ -0.47
COL4A3-203ENST00000468753 OTUD5Q96G74 571 aa12.12□□□□□ -0.47
COL4A3-203ENST00000468753 TRPC5Q9UL62 973 aaPredicted RBP12.12□□□□□ -0.47
COL4A3-203ENST00000468753 TIMELESSQ9UNS1 1208 aa12.12□□□□□ -0.47
COL4A3-203ENST00000468753 PAK3O75914 559 aaPredicted RBP12.11□□□□□ -0.47
COL4A3-203ENST00000468753 CABP1Q9NZU7 370 aa12.11□□□□□ -0.47
COL4A3-203ENST00000468753 RGS12O14924 1447 aa12.11□□□□□ -0.47
COL4A3-203ENST00000468753 SSH2Q76I76 1423 aa12.11□□□□□ -0.47
COL4A3-203ENST00000468753 BRD4O60885 1362 aaPredicted RBP12.1□□□□□ -0.47
COL4A3-203ENST00000468753 ATAD2Q6PL18 1390 aa12.1□□□□□ -0.47
COL4A3-203ENST00000468753 PLEKHG5O94827 1062 aa12.1□□□□□ -0.47
COL4A3-203ENST00000468753 USP6P35125 1406 aa12.1□□□□□ -0.47
COL4A3-203ENST00000468753 PLCH1Q4KWH8 1693 aa12.1□□□□□ -0.47
COL4A3-203ENST00000468753 NWD2Q9ULI1 1742 aa12.09□□□□□ -0.47
COL4A3-203ENST00000468753 PHRF1Q9P1Y6 1649 aaKnown RBP12.09□□□□□ -0.47
COL4A3-203ENST00000468753 FAM83GA6ND36 823 aa12.09□□□□□ -0.47
COL4A3-203ENST00000468753 HAP1P54257 671 aaPredicted RBP12.09□□□□□ -0.47
COL4A3-203ENST00000468753 UNC5CLQ8IV45 518 aa12.09□□□□□ -0.47
COL4A3-203ENST00000468753 TESK2Q96S53 571 aa12.09□□□□□ -0.47
COL4A3-203ENST00000468753 USP19O94966 1318 aa12.08□□□□□ -0.48
COL4A3-203ENST00000468753 AKAP12Q02952 1782 aa12.07□□□□□ -0.48
COL4A3-203ENST00000468753 COL14A1Q05707 1796 aaKnown RBP12.07□□□□□ -0.48
COL4A3-203ENST00000468753 ST20-MTHFSA0A0A6YYL1 179 aa12.07□□□□□ -0.48
COL4A3-203ENST00000468753 POTEMA6NI47 508 aa12.07□□□□□ -0.48
COL4A3-203ENST00000468753 GLI3P10071 1580 aa12.07□□□□□ -0.48
COL4A3-203ENST00000468753 CPSF1Q10570 1443 aaKnown RBP12.07□□□□□ -0.48
COL4A3-203ENST00000468753 NRAPQ86VF7 1730 aa12.07□□□□□ -0.48
COL4A3-203ENST00000468753 NRKQ7Z2Y5 1582 aa12.06□□□□□ -0.48
COL4A3-203ENST00000468753 NUTM2GQ5VZR2 741 aa12.06□□□□□ -0.48
COL4A3-203ENST00000468753 ABTB2Q8N961 1025 aa12.06□□□□□ -0.48
COL4A3-203ENST00000468753 GJD4Q96KN9 370 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms