RNA–Protein interactions for RNA: ENST00000468528.5

NXF3-204, Transcript of nuclear RNA export factor 3, humanhuman

TSL 5

Gene NXF3, Length 535 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-204ENST00000468528 SSH2Q76I76 1423 aa9.76□□□□□ -0.85
NXF3-204ENST00000468528 NSD3Q9BZ95 1437 aa9.76□□□□□ -0.85
NXF3-204ENST00000468528 TTC21BQ7Z4L5 1316 aa9.76□□□□□ -0.85
NXF3-204ENST00000468528 SBNO1A3KN83 1393 aa9.75□□□□□ -0.85
NXF3-204ENST00000468528 ANP32CO43423 234 aa9.75□□□□□ -0.85
NXF3-204ENST00000468528 RALBP1Q15311 655 aa9.75□□□□□ -0.85
NXF3-204ENST00000468528 KRT28Q7Z3Y7 464 aa9.75□□□□□ -0.85
NXF3-204ENST00000468528 SOS2Q07890 1332 aaPredicted RBP9.75□□□□□ -0.85
NXF3-204ENST00000468528 AKAP12Q02952 1782 aa9.75□□□□□ -0.85
NXF3-204ENST00000468528 MON2Q7Z3U7 1717 aa9.74□□□□□ -0.85
NXF3-204ENST00000468528 SCAF1Q9H7N4 1312 aaKnown RBP9.74□□□□□ -0.85
NXF3-204ENST00000468528 ARHGEF10O15013 1369 aa9.74□□□□□ -0.85
NXF3-204ENST00000468528 RGPD8O14715 1765 aaPredicted RBP9.73□□□□□ -0.85
NXF3-204ENST00000468528 FYB1O15117 783 aa9.73□□□□□ -0.85
NXF3-204ENST00000468528 NLRP13Q86W25 1043 aa9.73□□□□□ -0.85
NXF3-204ENST00000468528 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.73□□□□□ -0.85
NXF3-204ENST00000468528 ABTB2Q8N961 1025 aa9.73□□□□□ -0.85
NXF3-204ENST00000468528 LRRC59Q96AG4 307 aaKnown RBP9.73□□□□□ -0.85
NXF3-204ENST00000468528 COG3Q96JB2 828 aa9.73□□□□□ -0.85
NXF3-204ENST00000468528 USP31Q70CQ4 1352 aa9.73□□□□□ -0.85
NXF3-204ENST00000468528 AHDC1Q5TGY3 1603 aaPredicted RBP9.72□□□□□ -0.85
NXF3-204ENST00000468528 PAK3O75914 559 aaPredicted RBP9.72□□□□□ -0.85
NXF3-204ENST00000468528 PRKRIP1Q9H875 184 aaPredicted RBP9.72□□□□□ -0.85
NXF3-204ENST00000468528 SPATA31A3Q5VYP0 1347 aa9.72□□□□□ -0.85
NXF3-204ENST00000468528 PXDNQ92626 1479 aa9.72□□□□□ -0.85
NXF3-204ENST00000468528 NRKQ7Z2Y5 1582 aa9.71□□□□□ -0.85
NXF3-204ENST00000468528 ROBO1Q9Y6N7 1651 aa9.71□□□□□ -0.85
NXF3-204ENST00000468528 MORC1Q86VD1 984 aa9.71□□□□□ -0.86
NXF3-204ENST00000468528 KCNH5Q8NCM2 988 aa9.71□□□□□ -0.86
NXF3-204ENST00000468528 PARD3Q8TEW0 1356 aa9.71□□□□□ -0.86
NXF3-204ENST00000468528 TNS3Q68CZ2 1445 aa9.71□□□□□ -0.86
NXF3-204ENST00000468528 NHSL1Q5SYE7 1610 aa9.71□□□□□ -0.86
NXF3-204ENST00000468528 NLRP6P59044 892 aa9.7□□□□□ -0.86
NXF3-204ENST00000468528 PIP4K2BP78356 416 aa9.7□□□□□ -0.86
NXF3-204ENST00000468528 CC2D1BQ5T0F9 858 aaKnown RBP9.7□□□□□ -0.86
NXF3-204ENST00000468528 OVOS2A0A0J9YW53 1432 aa9.69□□□□□ -0.86
NXF3-204ENST00000468528 OVOS2Q6IE36 1432 aa9.69□□□□□ -0.86
NXF3-204ENST00000468528 AATKQ6ZMQ8 1374 aa9.69□□□□□ -0.86
NXF3-204ENST00000468528 NME9Q86XW9 330 aa9.69□□□□□ -0.86
NXF3-204ENST00000468528 PIAS4Q8N2W9 510 aaPredicted RBP9.69□□□□□ -0.86
NXF3-204ENST00000468528 GGNBP2Q9H3C7 697 aa9.69□□□□□ -0.86
NXF3-204ENST00000468528 KIF24Q5T7B8 1368 aa9.68□□□□□ -0.86
NXF3-204ENST00000468528 USP19O94966 1318 aa9.68□□□□□ -0.86
NXF3-204ENST00000468528 MYBBP1AQ9BQG0 1328 aaKnown RBP9.68□□□□□ -0.86
NXF3-204ENST00000468528 XPCQ01831 940 aaPredicted RBP9.68□□□□□ -0.86
NXF3-204ENST00000468528 TRPM3Q9HCF6 1732 aaPredicted RBP9.68□□□□□ -0.86
NXF3-204ENST00000468528 USP54Q70EL1 1684 aa9.67□□□□□ -0.86
NXF3-204ENST00000468528 CCER2I3L3R5 266 aa9.67□□□□□ -0.86
NXF3-204ENST00000468528 LMOD2Q6P5Q4 547 aa9.67□□□□□ -0.86
NXF3-204ENST00000468528 KIF20BQ96Q89 1820 aa9.67□□□□□ -0.86
NXF3-204ENST00000468528 MED1Q15648 1581 aaPredicted RBP9.67□□□□□ -0.86
NXF3-204ENST00000468528 ANKRD26Q9UPS8 1709 aa9.66□□□□□ -0.86
NXF3-204ENST00000468528 DDX17Q92841 729 aaKnown RBP9.66□□□□□ -0.86
NXF3-204ENST00000468528 PIK3C2AO00443 1686 aa9.66□□□□□ -0.86
NXF3-204ENST00000468528 ALS2Q96Q42 1657 aa9.66□□□□□ -0.86
NXF3-204ENST00000468528 GCP02774 474 aa9.65□□□□□ -0.86
NXF3-204ENST00000468528 PPP2R1AP30153 589 aa9.65□□□□□ -0.86
NXF3-204ENST00000468528 CFAP53Q96M91 514 aa9.65□□□□□ -0.86
NXF3-204ENST00000468528 JCADQ9P266 1359 aa9.64□□□□□ -0.87
NXF3-204ENST00000468528 COL16A1Q07092 1604 aaPredicted RBP9.64□□□□□ -0.87
NXF3-204ENST00000468528 FBXO41Q8TF61 875 aa9.64□□□□□ -0.87
NXF3-204ENST00000468528 FOXD4L1Q9NU39 408 aa9.64□□□□□ -0.87
NXF3-204ENST00000468528 SLIT3O75094 1523 aa9.64□□□□□ -0.87
NXF3-204ENST00000468528 PHLPP1O60346 1717 aa9.64□□□□□ -0.87
NXF3-204ENST00000468528 SMG6Q86US8 1419 aaKnown RBP9.64□□□□□ -0.87
NXF3-204ENST00000468528 RTL1A6NKG5 1358 aa9.63□□□□□ -0.87
NXF3-204ENST00000468528 CPDO75976 1380 aa9.63□□□□□ -0.87
NXF3-204ENST00000468528 INSRP06213 1382 aa9.63□□□□□ -0.87
NXF3-204ENST00000468528 PNPLA6Q8IY17 1366 aa9.63□□□□□ -0.87
NXF3-204ENST00000468528 SPATA31A6Q5VVP1 1343 aa9.63□□□□□ -0.87
NXF3-204ENST00000468528 HAP1P54257 671 aaPredicted RBP9.63□□□□□ -0.87
NXF3-204ENST00000468528 NUTM2GQ5VZR2 741 aa9.63□□□□□ -0.87
NXF3-204ENST00000468528 POLKQ9UBT6 870 aa9.63□□□□□ -0.87
NXF3-204ENST00000468528 ABCC6O95255 1503 aa9.62□□□□□ -0.87
NXF3-204ENST00000468528 TNNT2P45379 298 aaPredicted RBP9.62□□□□□ -0.87
NXF3-204ENST00000468528 MTHFSP49914 203 aa9.62□□□□□ -0.87
NXF3-204ENST00000468528 CNGB1Q14028 1251 aaPredicted RBP9.62□□□□□ -0.87
NXF3-204ENST00000468528 ARHGEF25Q86VW2 580 aa9.62□□□□□ -0.87
NXF3-204ENST00000468528 ZRANB1Q9UGI0 708 aa9.62□□□□□ -0.87
NXF3-204ENST00000468528 COL22A1Q8NFW1 1626 aaPredicted RBP9.62□□□□□ -0.87
NXF3-204ENST00000468528 FLT4P35916 1363 aa9.62□□□□□ -0.87
NXF3-204ENST00000468528 CDK12Q9NYV4 1490 aaPredicted RBP9.61□□□□□ -0.87
NXF3-204ENST00000468528 AMPHP49418 695 aa9.61□□□□□ -0.87
NXF3-204ENST00000468528 MIER1Q8N108 512 aa9.61□□□□□ -0.87
NXF3-204ENST00000468528 CNKSR2Q8WXI2 1034 aa9.61□□□□□ -0.87
NXF3-204ENST00000468528 NFAT5O94916 1531 aa9.61□□□□□ -0.87
NXF3-204ENST00000468528 MAP3K19Q56UN5 1328 aa9.6□□□□□ -0.87
NXF3-204ENST00000468528 BLMP54132 1417 aaPredicted RBP9.6□□□□□ -0.87
NXF3-204ENST00000468528 HSPA1LP34931 641 aa9.6□□□□□ -0.87
NXF3-204ENST00000468528 IP6K1Q92551 441 aa9.6□□□□□ -0.87
NXF3-204ENST00000468528 MRS2Q9HD23 443 aa9.6□□□□□ -0.87
NXF3-204ENST00000468528 NUDCQ9Y266 331 aa9.6□□□□□ -0.87
NXF3-204ENST00000468528 SHPRHQ149N8 1683 aa9.6□□□□□ -0.87
NXF3-204ENST00000468528 PHRF1Q9P1Y6 1649 aaKnown RBP9.6□□□□□ -0.87
NXF3-204ENST00000468528 RRS1Q15050 365 aaKnown RBP9.59□□□□□ -0.87
NXF3-204ENST00000468528 PRDM11Q9NQV5 511 aa9.59□□□□□ -0.87
NXF3-204ENST00000468528 PPM1GO15355 546 aaPredicted RBP9.58□□□□□ -0.88
NXF3-204ENST00000468528 SOX12O15370 315 aa9.58□□□□□ -0.88
NXF3-204ENST00000468528 DIAPH1O60610 1272 aaKnown RBP9.58□□□□□ -0.88
NXF3-204ENST00000468528 CABLES1Q8TDN4 633 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms