RNA–Protein interactions for RNA: ENST00000468469.5

COMMD3-207, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 526 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-207ENST00000468469 SRPK2P78362 688 aaKnown RBP5.12□□□□□ -1.59
COMMD3-207ENST00000468469 DDX17Q92841 729 aaKnown RBP5.12□□□□□ -1.59
COMMD3-207ENST00000468469 EVC2Q86UK5 1308 aa5.12□□□□□ -1.59
COMMD3-207ENST00000468469 ATAD2Q6PL18 1390 aa5.12□□□□□ -1.59
COMMD3-207ENST00000468469 TNS3Q68CZ2 1445 aa5.12□□□□□ -1.59
COMMD3-207ENST00000468469 PPIP5K1Q6PFW1 1433 aa5.12□□□□□ -1.59
COMMD3-207ENST00000468469 COL22A1Q8NFW1 1626 aaPredicted RBP5.12□□□□□ -1.59
COMMD3-207ENST00000468469 XPCQ01831 940 aaPredicted RBP5.11□□□□□ -1.59
COMMD3-207ENST00000468469 NUDT16Q96DE0 195 aaKnown RBP5.11□□□□□ -1.59
COMMD3-207ENST00000468469 CDK19Q9BWU1 502 aa5.11□□□□□ -1.59
COMMD3-207ENST00000468469 PHF8Q9UPP1 1060 aa5.11□□□□□ -1.59
COMMD3-207ENST00000468469 SOS2Q07890 1332 aaPredicted RBP5.11□□□□□ -1.59
COMMD3-207ENST00000468469 PNPLA6Q8IY17 1366 aa5.11□□□□□ -1.59
COMMD3-207ENST00000468469 NRKQ7Z2Y5 1582 aa5.11□□□□□ -1.59
COMMD3-207ENST00000468469 LRP6O75581 1613 aa5.11□□□□□ -1.59
COMMD3-207ENST00000468469 TRPM3Q9HCF6 1732 aaPredicted RBP5.11□□□□□ -1.59
COMMD3-207ENST00000468469 RGPD8O14715 1765 aaPredicted RBP5.11□□□□□ -1.59
COMMD3-207ENST00000468469 ST20-MTHFSA0A0A6YYL1 179 aa5.1□□□□□ -1.59
COMMD3-207ENST00000468469 SBNO1A3KN83 1393 aa5.1□□□□□ -1.59
COMMD3-207ENST00000468469 POLR3AO14802 1390 aaPredicted RBP5.1□□□□□ -1.59
COMMD3-207ENST00000468469 FOXO3O43524 673 aa5.1□□□□□ -1.59
COMMD3-207ENST00000468469 CD44P16070 742 aaKnown RBP5.1□□□□□ -1.59
COMMD3-207ENST00000468469 SPATA31A6Q5VVP1 1343 aa5.1□□□□□ -1.59
COMMD3-207ENST00000468469 PMFBP1Q8TBY8 1022 aa5.1□□□□□ -1.59
COMMD3-207ENST00000468469 ABCA3Q99758 1704 aa5.1□□□□□ -1.59
COMMD3-207ENST00000468469 CABP2Q9NPB3 220 aa5.1□□□□□ -1.59
COMMD3-207ENST00000468469 DISP3Q9P2K9 1392 aa5.1□□□□□ -1.59
COMMD3-207ENST00000468469 ALS2Q96Q42 1657 aa5.09□□□□□ -1.59
COMMD3-207ENST00000468469 USP6P35125 1406 aa5.09□□□□□ -1.59
COMMD3-207ENST00000468469 ARHGEF10O15013 1369 aa5.09□□□□□ -1.59
COMMD3-207ENST00000468469 NINLQ9Y2I6 1382 aa5.09□□□□□ -1.59
COMMD3-207ENST00000468469 PSME1Q06323 249 aa5.09□□□□□ -1.59
COMMD3-207ENST00000468469 NGDNQ8NEJ9 315 aaKnown RBP5.09□□□□□ -1.59
COMMD3-207ENST00000468469 LRRC59Q96AG4 307 aaKnown RBP5.09□□□□□ -1.59
COMMD3-207ENST00000468469 TESK2Q96S53 571 aa5.09□□□□□ -1.59
COMMD3-207ENST00000468469 SSUH2Q9Y2M2 353 aa5.09□□□□□ -1.59
COMMD3-207ENST00000468469 CCDC61Q9Y6R9 512 aa5.09□□□□□ -1.59
COMMD3-207ENST00000468469 MON2Q7Z3U7 1717 aa5.09□□□□□ -1.6
COMMD3-207ENST00000468469 MYOM1P52179 1685 aa5.08□□□□□ -1.6
COMMD3-207ENST00000468469 PHRF1Q9P1Y6 1649 aaKnown RBP5.08□□□□□ -1.6
COMMD3-207ENST00000468469 ACEP12821 1306 aa5.08□□□□□ -1.6
COMMD3-207ENST00000468469 SPATA31A3Q5VYP0 1347 aa5.08□□□□□ -1.6
COMMD3-207ENST00000468469 PLEKHG3A1L390 1219 aa5.08□□□□□ -1.6
COMMD3-207ENST00000468469 POTEMA6NI47 508 aa5.08□□□□□ -1.6
COMMD3-207ENST00000468469 SLC24A1O60721 1099 aa5.08□□□□□ -1.6
COMMD3-207ENST00000468469 EIF4G2P78344 907 aaKnown RBP eCLIP5.08□□□□□ -1.6
COMMD3-207ENST00000468469 TMF1P82094 1093 aa5.08□□□□□ -1.6
COMMD3-207ENST00000468469 MEX3CQ5U5Q3 659 aaKnown RBP5.08□□□□□ -1.6
COMMD3-207ENST00000468469 KRT28Q7Z3Y7 464 aa5.08□□□□□ -1.6
COMMD3-207ENST00000468469 AKAP12Q02952 1782 aa5.08□□□□□ -1.6
COMMD3-207ENST00000468469 CRYBG1Q9Y4K1 1723 aa5.08□□□□□ -1.6
COMMD3-207ENST00000468469 CD163L1Q9NR16 1453 aa5.07□□□□□ -1.6
COMMD3-207ENST00000468469 BRD4O60885 1362 aaPredicted RBP5.07□□□□□ -1.6
COMMD3-207ENST00000468469 NUTM2BA6NNL0 878 aaPredicted RBP5.07□□□□□ -1.6
COMMD3-207ENST00000468469 NUTM2EB1AL46 878 aaPredicted RBP5.07□□□□□ -1.6
COMMD3-207ENST00000468469 PAK3O75914 559 aaPredicted RBP5.07□□□□□ -1.6
COMMD3-207ENST00000468469 HSPA5P11021 654 aaKnown RBP5.07□□□□□ -1.6
COMMD3-207ENST00000468469 CDCA8Q53HL2 280 aa5.07□□□□□ -1.6
COMMD3-207ENST00000468469 LMOD2Q6P5Q4 547 aa5.07□□□□□ -1.6
COMMD3-207ENST00000468469 NUTM2AQ8IVF1 878 aaPredicted RBP5.07□□□□□ -1.6
COMMD3-207ENST00000468469 OTUD5Q96G74 571 aa5.07□□□□□ -1.6
COMMD3-207ENST00000468469 DCBLD2Q96PD2 775 aa5.07□□□□□ -1.6
COMMD3-207ENST00000468469 ZNF692Q9BU19 519 aaPredicted RBP5.07□□□□□ -1.6
COMMD3-207ENST00000468469 CABP1Q9NZU7 370 aa5.07□□□□□ -1.6
COMMD3-207ENST00000468469 PIK3C2AO00443 1686 aa5.07□□□□□ -1.6
COMMD3-207ENST00000468469 CPSF1Q10570 1443 aaKnown RBP5.06□□□□□ -1.6
COMMD3-207ENST00000468469 A0A1W2PP64 1363 aa5.06□□□□□ -1.6
COMMD3-207ENST00000468469 KTN1Q86UP2 1357 aaKnown RBP5.06□□□□□ -1.6
COMMD3-207ENST00000468469 ANKRD36BQ8N2N9 1353 aa5.06□□□□□ -1.6
COMMD3-207ENST00000468469 PLEKHG5O94827 1062 aa5.06□□□□□ -1.6
COMMD3-207ENST00000468469 HAP1P54257 671 aaPredicted RBP5.06□□□□□ -1.6
COMMD3-207ENST00000468469 POTEGQ6S5H5 508 aa5.06□□□□□ -1.6
COMMD3-207ENST00000468469 TMC1Q8TDI8 760 aa5.06□□□□□ -1.6
COMMD3-207ENST00000468469 PUS7Q96PZ0 661 aaKnown RBP5.06□□□□□ -1.6
COMMD3-207ENST00000468469 SLIT3O75094 1523 aa5.06□□□□□ -1.6
COMMD3-207ENST00000468469 MARF1Q9Y4F3 1742 aaKnown RBP5.06□□□□□ -1.6
COMMD3-207ENST00000468469 EDC4Q6P2E9 1401 aaKnown RBP5.06□□□□□ -1.6
COMMD3-207ENST00000468469 SSH2Q76I76 1423 aa5.06□□□□□ -1.6
COMMD3-207ENST00000468469 PLCH1Q4KWH8 1693 aa5.05□□□□□ -1.6
COMMD3-207ENST00000468469 USP54Q70EL1 1684 aa5.05□□□□□ -1.6
COMMD3-207ENST00000468469 PRR29P0C7W0 189 aa5.05□□□□□ -1.6
COMMD3-207ENST00000468469 MKRN4PQ13434 485 aaPredicted RBP5.05□□□□□ -1.6
COMMD3-207ENST00000468469 HDGFL2Q7Z4V5 671 aaPredicted RBP5.05□□□□□ -1.6
COMMD3-207ENST00000468469 SLC12A5Q9H2X9 1139 aa5.05□□□□□ -1.6
COMMD3-207ENST00000468469 TERF2IPQ9NYB0 399 aa5.05□□□□□ -1.6
COMMD3-207ENST00000468469 COL14A1Q05707 1796 aaKnown RBP5.04□□□□□ -1.6
COMMD3-207ENST00000468469 USP19O94966 1318 aa5.04□□□□□ -1.6
COMMD3-207ENST00000468469 TTC21AQ8NDW8 1320 aa5.04□□□□□ -1.6
COMMD3-207ENST00000468469 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.04□□□□□ -1.6
COMMD3-207ENST00000468469 ADAMTS2O95450 1211 aa5.04□□□□□ -1.6
COMMD3-207ENST00000468469 CLCN6P51797 869 aa5.04□□□□□ -1.6
COMMD3-207ENST00000468469 NUTM2GQ5VZR2 741 aa5.04□□□□□ -1.6
COMMD3-207ENST00000468469 CABLES1Q8TDN4 633 aa5.04□□□□□ -1.6
COMMD3-207ENST00000468469 C8orf37Q96NL8 207 aa5.04□□□□□ -1.6
COMMD3-207ENST00000468469 POLR3GLQ9BT43 218 aa5.04□□□□□ -1.6
COMMD3-207ENST00000468469 OVOS2A0A0J9YW53 1432 aa5.04□□□□□ -1.6
COMMD3-207ENST00000468469 OVOS2Q6IE36 1432 aa5.04□□□□□ -1.6
COMMD3-207ENST00000468469 NSD3Q9BZ95 1437 aa5.04□□□□□ -1.6
COMMD3-207ENST00000468469 NRAPQ86VF7 1730 aa5.03□□□□□ -1.6
COMMD3-207ENST00000468469 NWD2Q9ULI1 1742 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms