RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 U2AF1L5P0DN76 240 aaPredicted RBP20.23■□□□□ 0.83
TSPAN4-211ENST00000468468 U2AF1Q01081 240 aaKnown RBP eCLIP20.23■□□□□ 0.83
TSPAN4-211ENST00000468468 ANKRD36BQ8N2N9 1353 aa20.23■□□□□ 0.83
TSPAN4-211ENST00000468468 USP19O94966 1318 aa20.23■□□□□ 0.83
TSPAN4-211ENST00000468468 AAMPQ13685 434 aa20.23■□□□□ 0.83
TSPAN4-211ENST00000468468 GSE1Q14687 1217 aa20.23■□□□□ 0.83
TSPAN4-211ENST00000468468 PCDHB15Q9Y5E8 787 aa20.22■□□□□ 0.83
TSPAN4-211ENST00000468468 EIF5BO60841 1220 aaKnown RBP20.22■□□□□ 0.83
TSPAN4-211ENST00000468468 SEC24BO95487 1268 aa20.22■□□□□ 0.83
TSPAN4-211ENST00000468468 MYH16Q9H6N6 1097 aa20.22■□□□□ 0.83
TSPAN4-211ENST00000468468 VIRMAQ69YN4 1812 aaKnown RBP20.22■□□□□ 0.83
TSPAN4-211ENST00000468468 NSD2O96028 1365 aa20.21■□□□□ 0.83
TSPAN4-211ENST00000468468 A0A1W2PP64 1363 aa20.19■□□□□ 0.82
TSPAN4-211ENST00000468468 NCBP3Q53F19 620 aaKnown RBP20.18■□□□□ 0.82
TSPAN4-211ENST00000468468 WAPLQ7Z5K2 1190 aa20.18■□□□□ 0.82
TSPAN4-211ENST00000468468 FRAT2O75474 233 aaPredicted RBP20.17■□□□□ 0.82
TSPAN4-211ENST00000468468 PDZRN3Q9UPQ7 1066 aa20.17■□□□□ 0.82
TSPAN4-211ENST00000468468 CDK19Q9BWU1 502 aa20.16■□□□□ 0.82
TSPAN4-211ENST00000468468 RWDD1Q9H446 243 aaPredicted RBP20.16■□□□□ 0.82
TSPAN4-211ENST00000468468 ATAD2Q6PL18 1390 aa20.15■□□□□ 0.82
TSPAN4-211ENST00000468468 TNRQ92752 1358 aa20.14■□□□□ 0.81
TSPAN4-211ENST00000468468 U2SURPO15042 1029 aaKnown RBP20.14■□□□□ 0.81
TSPAN4-211ENST00000468468 MVPQ14764 893 aaKnown RBP20.14■□□□□ 0.81
TSPAN4-211ENST00000468468 ZKSCAN2Q63HK3 967 aa20.14■□□□□ 0.81
TSPAN4-211ENST00000468468 TSR2Q969E8 191 aaKnown RBP20.13■□□□□ 0.81
TSPAN4-211ENST00000468468 GGNBP2Q9H3C7 697 aa20.13■□□□□ 0.81
TSPAN4-211ENST00000468468 BRPF3Q9ULD4 1205 aa20.13■□□□□ 0.81
TSPAN4-211ENST00000468468 SETD1AO15047 1707 aaKnown RBP20.13■□□□□ 0.81
TSPAN4-211ENST00000468468 ADGRB2O60241 1585 aa20.13■□□□□ 0.81
TSPAN4-211ENST00000468468 BECN1Q14457 450 aa20.12■□□□□ 0.81
TSPAN4-211ENST00000468468 METP08581 1390 aa20.12■□□□□ 0.81
TSPAN4-211ENST00000468468 ABCC11Q96J66 1382 aa20.12■□□□□ 0.81
TSPAN4-211ENST00000468468 CD163L1Q9NR16 1453 aa20.12■□□□□ 0.81
TSPAN4-211ENST00000468468 FTSJ3Q8IY81 847 aaKnown RBP20.12■□□□□ 0.81
TSPAN4-211ENST00000468468 DZIP1LQ8IYY4 767 aaKnown RBP20.12■□□□□ 0.81
TSPAN4-211ENST00000468468 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.11■□□□□ 0.81
TSPAN4-211ENST00000468468 CABP1Q9NZU7 370 aa20.11■□□□□ 0.81
TSPAN4-211ENST00000468468 NRXN3Q9Y4C0 1643 aa20.11■□□□□ 0.81
TSPAN4-211ENST00000468468 TERF2IPQ9NYB0 399 aa20.11■□□□□ 0.81
TSPAN4-211ENST00000468468 NLRP1Q9C000 1473 aa20.1■□□□□ 0.81
TSPAN4-211ENST00000468468 CT47B1P0C2W7 299 aaPredicted RBP20.1■□□□□ 0.81
TSPAN4-211ENST00000468468 CEBPAP49715 358 aaPredicted RBP20.1■□□□□ 0.81
TSPAN4-211ENST00000468468 PLEKHF1Q96S99 279 aa20.1■□□□□ 0.81
TSPAN4-211ENST00000468468 UPF2Q9HAU5 1272 aaKnown RBP20.1■□□□□ 0.81
TSPAN4-211ENST00000468468 TMPOP42166 694 aaKnown RBP20.1■□□□□ 0.81
TSPAN4-211ENST00000468468 EXOSC9Q06265 439 aaKnown RBP20.1■□□□□ 0.81
TSPAN4-211ENST00000468468 SMC4Q9NTJ3 1288 aa20.09■□□□□ 0.81
TSPAN4-211ENST00000468468 TXNDC2Q86VQ3 553 aa20.08■□□□□ 0.81
TSPAN4-211ENST00000468468 DLC1Q96QB1 1528 aa20.08■□□□□ 0.81
TSPAN4-211ENST00000468468 FYB1O15117 783 aa20.08■□□□□ 0.8
TSPAN4-211ENST00000468468 PLPPR3Q6T4P5 718 aa20.08■□□□□ 0.8
TSPAN4-211ENST00000468468 TRIM35Q9UPQ4 493 aa20.08■□□□□ 0.8
TSPAN4-211ENST00000468468 HDGFL2Q7Z4V5 671 aaPredicted RBP20.06■□□□□ 0.8
TSPAN4-211ENST00000468468 TBC1D32Q96NH3 1257 aa20.06■□□□□ 0.8
TSPAN4-211ENST00000468468 SSH1Q8WYL5 1049 aa20.05■□□□□ 0.8
TSPAN4-211ENST00000468468 SLKQ9H2G2 1235 aaPredicted RBP20.05■□□□□ 0.8
TSPAN4-211ENST00000468468 TMEM2Q9UHN6 1383 aa20.05■□□□□ 0.8
TSPAN4-211ENST00000468468 TRIM27P14373 513 aa20.05■□□□□ 0.8
TSPAN4-211ENST00000468468 COL3A1P02461 1466 aaPredicted RBP20.04■□□□□ 0.8
TSPAN4-211ENST00000468468 HDGFP51858 240 aaKnown RBP20.04■□□□□ 0.8
TSPAN4-211ENST00000468468 UBR1Q8IWV7 1749 aa20.03■□□□□ 0.8
TSPAN4-211ENST00000468468 RIPK4P57078 832 aa20.03■□□□□ 0.8
TSPAN4-211ENST00000468468 ITPRIPQ8IWB1 547 aa20.03■□□□□ 0.8
TSPAN4-211ENST00000468468 DNAJC5Q9H3Z4 198 aa20.03■□□□□ 0.8
TSPAN4-211ENST00000468468 ATF7IPQ6VMQ6 1270 aa20.02■□□□□ 0.8
TSPAN4-211ENST00000468468 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.02■□□□□ 0.8
TSPAN4-211ENST00000468468 DDX19BQ9UMR2 479 aa20.02■□□□□ 0.8
TSPAN4-211ENST00000468468 IL16Q14005 1332 aa20.01■□□□□ 0.79
TSPAN4-211ENST00000468468 TRHP20396 242 aaPredicted RBP20.01■□□□□ 0.79
TSPAN4-211ENST00000468468 NOB1Q9ULX3 412 aaKnown RBP20.01■□□□□ 0.79
TSPAN4-211ENST00000468468 WASLO00401 505 aaPredicted RBP20.01■□□□□ 0.79
TSPAN4-211ENST00000468468 DIAPH1O60610 1272 aaKnown RBP20.01■□□□□ 0.79
TSPAN4-211ENST00000468468 LTKP29376 864 aa20.01■□□□□ 0.79
TSPAN4-211ENST00000468468 PKNOX2Q96KN3 472 aa20.01■□□□□ 0.79
TSPAN4-211ENST00000468468 NCKAP5LQ9HCH0 1330 aa20■□□□□ 0.79
TSPAN4-211ENST00000468468 HDAC1Q13547 482 aaPredicted RBP20■□□□□ 0.79
TSPAN4-211ENST00000468468 TBC1D2Q9BYX2 928 aa20■□□□□ 0.79
TSPAN4-211ENST00000468468 MED14O60244 1454 aa19.99■□□□□ 0.79
TSPAN4-211ENST00000468468 PNNQ9H307 717 aaKnown RBP19.98■□□□□ 0.79
TSPAN4-211ENST00000468468 ANKRD26Q9UPS8 1709 aa19.98■□□□□ 0.79
TSPAN4-211ENST00000468468 FBLN1P23142 703 aa19.98■□□□□ 0.79
TSPAN4-211ENST00000468468 ANTXR1Q9H6X2 564 aa19.98■□□□□ 0.79
TSPAN4-211ENST00000468468 TMEM57Q8N5G2 664 aa19.97■□□□□ 0.79
TSPAN4-211ENST00000468468 ADAMTS13Q76LX8 1427 aa19.97■□□□□ 0.79
TSPAN4-211ENST00000468468 PPIP5K1Q6PFW1 1433 aa19.96■□□□□ 0.79
TSPAN4-211ENST00000468468 ATP7BP35670 1465 aa19.95■□□□□ 0.78
TSPAN4-211ENST00000468468 PNPLA6Q8IY17 1366 aa19.95■□□□□ 0.78
TSPAN4-211ENST00000468468 ROBO2Q9HCK4 1378 aa19.95■□□□□ 0.78
TSPAN4-211ENST00000468468 TECPR2O15040 1411 aa19.95■□□□□ 0.78
TSPAN4-211ENST00000468468 NUDT16Q96DE0 195 aaKnown RBP19.95■□□□□ 0.78
TSPAN4-211ENST00000468468 FAM135BQ49AJ0 1406 aa19.95■□□□□ 0.78
TSPAN4-211ENST00000468468 IPO8O15397 1037 aaKnown RBP19.95■□□□□ 0.78
TSPAN4-211ENST00000468468 SLC26A8Q96RN1 970 aa19.95■□□□□ 0.78
TSPAN4-211ENST00000468468 MFAP1P55081 439 aaKnown RBP19.94■□□□□ 0.78
TSPAN4-211ENST00000468468 SMC5Q8IY18 1101 aa19.94■□□□□ 0.78
TSPAN4-211ENST00000468468 KIF16BQ96L93 1317 aa19.94■□□□□ 0.78
TSPAN4-211ENST00000468468 C22orf23Q9BZE7 217 aa19.94■□□□□ 0.78
TSPAN4-211ENST00000468468 ZBTB40Q9NUA8 1239 aa19.94■□□□□ 0.78
TSPAN4-211ENST00000468468 KNDC1Q76NI1 1749 aa19.93■□□□□ 0.78
TSPAN4-211ENST00000468468 KIF20BQ96Q89 1820 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms