RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 NUTM2EB1AL46 878 aaPredicted RBP15.96■□□□□ 0.15
COL4A6-205ENST00000468338 SOCS7O14512 581 aa15.96■□□□□ 0.15
COL4A6-205ENST00000468338 NUTM2AQ8IVF1 878 aaPredicted RBP15.96■□□□□ 0.15
COL4A6-205ENST00000468338 PLCD3Q8N3E9 789 aa15.96■□□□□ 0.15
COL4A6-205ENST00000468338 CDK19Q9BWU1 502 aa15.96■□□□□ 0.15
COL4A6-205ENST00000468338 SBNO1A3KN83 1393 aa15.96■□□□□ 0.15
COL4A6-205ENST00000468338 ECM2O94769 699 aaPredicted RBP15.95■□□□□ 0.14
COL4A6-205ENST00000468338 NUDT16Q96DE0 195 aaKnown RBP15.95■□□□□ 0.14
COL4A6-205ENST00000468338 PCGF6Q9BYE7 350 aa15.95■□□□□ 0.14
COL4A6-205ENST00000468338 ROCK2O75116 1388 aaKnown RBP15.95■□□□□ 0.14
COL4A6-205ENST00000468338 DSG3P32926 999 aa15.94■□□□□ 0.14
COL4A6-205ENST00000468338 PSME1Q06323 249 aa15.94■□□□□ 0.14
COL4A6-205ENST00000468338 MEX3CQ5U5Q3 659 aaKnown RBP15.94■□□□□ 0.14
COL4A6-205ENST00000468338 PMFBP1Q8TBY8 1022 aa15.94■□□□□ 0.14
COL4A6-205ENST00000468338 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.94■□□□□ 0.14
COL4A6-205ENST00000468338 CLSPNQ9HAW4 1339 aa15.94■□□□□ 0.14
COL4A6-205ENST00000468338 ZNF772Q68DY9 489 aaPredicted RBP15.93■□□□□ 0.14
COL4A6-205ENST00000468338 CCDC61Q9Y6R9 512 aa15.93■□□□□ 0.14
COL4A6-205ENST00000468338 ITSN1Q15811 1721 aa15.93■□□□□ 0.14
COL4A6-205ENST00000468338 TNS3Q68CZ2 1445 aa15.93■□□□□ 0.14
COL4A6-205ENST00000468338 QRICH2Q9H0J4 1663 aa15.92■□□□□ 0.14
COL4A6-205ENST00000468338 RALGAPBQ86X10 1494 aa15.92■□□□□ 0.14
COL4A6-205ENST00000468338 TRPM3Q9HCF6 1732 aaPredicted RBP15.92■□□□□ 0.14
COL4A6-205ENST00000468338 TOPAZ1Q8N9V7 1692 aa15.92■□□□□ 0.14
COL4A6-205ENST00000468338 PLEKHG3A1L390 1219 aa15.91■□□□□ 0.14
COL4A6-205ENST00000468338 VSIG10Q8N0Z9 540 aa15.91■□□□□ 0.14
COL4A6-205ENST00000468338 SSUH2Q9Y2M2 353 aa15.91■□□□□ 0.14
COL4A6-205ENST00000468338 POLR3AO14802 1390 aaPredicted RBP15.9■□□□□ 0.14
COL4A6-205ENST00000468338 AFF2P51816 1311 aa15.9■□□□□ 0.14
COL4A6-205ENST00000468338 SBNO2Q9Y2G9 1366 aa15.89■□□□□ 0.13
COL4A6-205ENST00000468338 ADAMTS2O95450 1211 aa15.89■□□□□ 0.13
COL4A6-205ENST00000468338 FNBP4Q8N3X1 1017 aaPredicted RBP15.89■□□□□ 0.13
COL4A6-205ENST00000468338 C8orf37Q96NL8 207 aa15.89■□□□□ 0.13
COL4A6-205ENST00000468338 ARHGEF10O15013 1369 aa15.88■□□□□ 0.13
COL4A6-205ENST00000468338 MIER1Q8N108 512 aa15.88■□□□□ 0.13
COL4A6-205ENST00000468338 NGDNQ8NEJ9 315 aaKnown RBP15.88■□□□□ 0.13
COL4A6-205ENST00000468338 BBXQ8WY36 941 aaPredicted RBP15.88■□□□□ 0.13
COL4A6-205ENST00000468338 TIMELESSQ9UNS1 1208 aa15.88■□□□□ 0.13
COL4A6-205ENST00000468338 ALS2Q96Q42 1657 aa15.88■□□□□ 0.13
COL4A6-205ENST00000468338 MARF1Q9Y4F3 1742 aaKnown RBP15.88■□□□□ 0.13
COL4A6-205ENST00000468338 CARD11Q9BXL7 1154 aa15.87■□□□□ 0.13
COL4A6-205ENST00000468338 CABP2Q9NPB3 220 aa15.87■□□□□ 0.13
COL4A6-205ENST00000468338 SRPK2P78362 688 aaKnown RBP15.86■□□□□ 0.13
COL4A6-205ENST00000468338 NGLY1Q96IV0 654 aa15.86■□□□□ 0.13
COL4A6-205ENST00000468338 EVC2Q86UK5 1308 aa15.86■□□□□ 0.13
COL4A6-205ENST00000468338 ACEP12821 1306 aa15.85■□□□□ 0.13
COL4A6-205ENST00000468338 PPIP5K1Q6PFW1 1433 aa15.84■□□□□ 0.13
COL4A6-205ENST00000468338 BCL9LQ86UU0 1499 aa15.84■□□□□ 0.13
COL4A6-205ENST00000468338 ABCA3Q99758 1704 aa15.83■□□□□ 0.13
COL4A6-205ENST00000468338 CABLES1Q8TDN4 633 aa15.83■□□□□ 0.12
COL4A6-205ENST00000468338 QTRT2Q9H974 415 aaKnown RBP15.82■□□□□ 0.12
COL4A6-205ENST00000468338 USP21Q9UK80 565 aa15.82■□□□□ 0.12
COL4A6-205ENST00000468338 CDK12Q9NYV4 1490 aaPredicted RBP15.82■□□□□ 0.12
COL4A6-205ENST00000468338 SLIT2O94813 1529 aa15.82■□□□□ 0.12
COL4A6-205ENST00000468338 BRD4O60885 1362 aaPredicted RBP15.81■□□□□ 0.12
COL4A6-205ENST00000468338 RXRBP28702 533 aa15.81■□□□□ 0.12
COL4A6-205ENST00000468338 LMOD2Q6P5Q4 547 aa15.81■□□□□ 0.12
COL4A6-205ENST00000468338 CABP1Q9NZU7 370 aa15.81■□□□□ 0.12
COL4A6-205ENST00000468338 CRYBG1Q9Y4K1 1723 aa15.81■□□□□ 0.12
COL4A6-205ENST00000468338 ATRNO75882 1429 aa15.8■□□□□ 0.12
COL4A6-205ENST00000468338 PLEKHG5O94827 1062 aa15.8■□□□□ 0.12
COL4A6-205ENST00000468338 RBM6P78332 1123 aaKnown RBP15.8■□□□□ 0.12
COL4A6-205ENST00000468338 SSH2Q76I76 1423 aa15.79■□□□□ 0.12
COL4A6-205ENST00000468338 ATAD2Q6PL18 1390 aa15.79■□□□□ 0.12
COL4A6-205ENST00000468338 PUS7Q96PZ0 661 aaKnown RBP15.79■□□□□ 0.12
COL4A6-205ENST00000468338 TESK2Q96S53 571 aa15.79■□□□□ 0.12
COL4A6-205ENST00000468338 TRPC5Q9UL62 973 aaPredicted RBP15.79■□□□□ 0.12
COL4A6-205ENST00000468338 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.79■□□□□ 0.12
COL4A6-205ENST00000468338 PAK3O75914 559 aaPredicted RBP15.78■□□□□ 0.12
COL4A6-205ENST00000468338 USP6P35125 1406 aa15.77■□□□□ 0.12
COL4A6-205ENST00000468338 FAM83GA6ND36 823 aa15.77■□□□□ 0.12
COL4A6-205ENST00000468338 UNC5CLQ8IV45 518 aa15.77■□□□□ 0.12
COL4A6-205ENST00000468338 CPSF1Q10570 1443 aaKnown RBP15.77■□□□□ 0.11
COL4A6-205ENST00000468338 ST20-MTHFSA0A0A6YYL1 179 aa15.76■□□□□ 0.11
COL4A6-205ENST00000468338 POTEDQ86YR6 584 aa15.76■□□□□ 0.11
COL4A6-205ENST00000468338 ZBTB47Q9UFB7 747 aaPredicted RBP15.76■□□□□ 0.11
COL4A6-205ENST00000468338 NWD2Q9ULI1 1742 aa15.76■□□□□ 0.11
COL4A6-205ENST00000468338 PAXIP1Q6ZW49 1069 aaPredicted RBP15.75■□□□□ 0.11
COL4A6-205ENST00000468338 CCER1Q8TC90 406 aaPredicted RBP15.75■□□□□ 0.11
COL4A6-205ENST00000468338 USP19O94966 1318 aa15.74■□□□□ 0.11
COL4A6-205ENST00000468338 ABTB2Q8N961 1025 aa15.74■□□□□ 0.11
COL4A6-205ENST00000468338 AKAP12Q02952 1782 aa15.74■□□□□ 0.11
COL4A6-205ENST00000468338 PLCH1Q4KWH8 1693 aa15.73■□□□□ 0.11
COL4A6-205ENST00000468338 PHRF1Q9P1Y6 1649 aaKnown RBP15.73■□□□□ 0.11
COL4A6-205ENST00000468338 GJD4Q96KN9 370 aaPredicted RBP15.73■□□□□ 0.11
COL4A6-205ENST00000468338 RGS12O14924 1447 aa15.73■□□□□ 0.11
COL4A6-205ENST00000468338 USP47Q96K76 1375 aa15.73■□□□□ 0.11
COL4A6-205ENST00000468338 COL14A1Q05707 1796 aaKnown RBP15.72■□□□□ 0.11
COL4A6-205ENST00000468338 CFAP44Q96MT7 982 aa15.72■□□□□ 0.11
COL4A6-205ENST00000468338 CD163L1Q9NR16 1453 aa15.71■□□□□ 0.11
COL4A6-205ENST00000468338 VPS72Q15906 364 aa15.71■□□□□ 0.11
COL4A6-205ENST00000468338 NUTM2GQ5VZR2 741 aa15.71■□□□□ 0.11
COL4A6-205ENST00000468338 NLRP13Q86W25 1043 aa15.71■□□□□ 0.11
COL4A6-205ENST00000468338 NRAPQ86VF7 1730 aa15.71■□□□□ 0.1
COL4A6-205ENST00000468338 GLI3P10071 1580 aa15.7■□□□□ 0.1
COL4A6-205ENST00000468338 TTC21BQ7Z4L5 1316 aa15.7■□□□□ 0.1
COL4A6-205ENST00000468338 RGL2O15211 777 aa15.7■□□□□ 0.1
COL4A6-205ENST00000468338 CPDO75976 1380 aa15.7■□□□□ 0.1
COL4A6-205ENST00000468338 KIAA0232Q92628 1395 aa15.7■□□□□ 0.1
COL4A6-205ENST00000468338 NRKQ7Z2Y5 1582 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms