RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 ABTB2Q8N961 1025 aa27.99■■■□□ 2.07
NPHP4-206ENST00000468253 NGLY1Q96IV0 654 aa27.99■■■□□ 2.07
NPHP4-206ENST00000468253 CPSF1Q10570 1443 aaKnown RBP27.99■■■□□ 2.07
NPHP4-206ENST00000468253 NINLQ9Y2I6 1382 aa27.99■■■□□ 2.07
NPHP4-206ENST00000468253 HSPA5P11021 654 aaKnown RBP27.98■■■□□ 2.07
NPHP4-206ENST00000468253 FNBP4Q8N3X1 1017 aaPredicted RBP27.98■■■□□ 2.07
NPHP4-206ENST00000468253 TERF2IPQ9NYB0 399 aa27.98■■■□□ 2.07
NPHP4-206ENST00000468253 CABLES1Q8TDN4 633 aa27.97■■■□□ 2.07
NPHP4-206ENST00000468253 C8orf37Q96NL8 207 aa27.97■■■□□ 2.07
NPHP4-206ENST00000468253 USP6P35125 1406 aa27.97■■■□□ 2.07
NPHP4-206ENST00000468253 SSH2Q76I76 1423 aa27.96■■■□□ 2.07
NPHP4-206ENST00000468253 HAP1P54257 671 aaPredicted RBP27.96■■■□□ 2.07
NPHP4-206ENST00000468253 HDGFL2Q7Z4V5 671 aaPredicted RBP27.96■■■□□ 2.07
NPHP4-206ENST00000468253 NLRP13Q86W25 1043 aa27.95■■■□□ 2.06
NPHP4-206ENST00000468253 TRPM3Q9HCF6 1732 aaPredicted RBP27.95■■■□□ 2.06
NPHP4-206ENST00000468253 AFF2P51816 1311 aa27.93■■■□□ 2.06
NPHP4-206ENST00000468253 TTC21BQ7Z4L5 1316 aa27.93■■■□□ 2.06
NPHP4-206ENST00000468253 TTC21AQ8NDW8 1320 aa27.92■■■□□ 2.06
NPHP4-206ENST00000468253 KTN1Q86UP2 1357 aaKnown RBP27.92■■■□□ 2.06
NPHP4-206ENST00000468253 POTEAQ6S8J7 498 aa27.92■■■□□ 2.06
NPHP4-206ENST00000468253 ALS2Q96Q42 1657 aa27.89■■■□□ 2.06
NPHP4-206ENST00000468253 NLRP6P59044 892 aa27.89■■■□□ 2.06
NPHP4-206ENST00000468253 NUTM2GQ5VZR2 741 aa27.88■■■□□ 2.05
NPHP4-206ENST00000468253 ILDR2Q71H61 639 aa27.88■■■□□ 2.05
NPHP4-206ENST00000468253 FAM83GA6ND36 823 aa27.87■■■□□ 2.05
NPHP4-206ENST00000468253 USP21Q9UK80 565 aa27.87■■■□□ 2.05
NPHP4-206ENST00000468253 CD163L1Q9NR16 1453 aa27.87■■■□□ 2.05
NPHP4-206ENST00000468253 USP19O94966 1318 aa27.87■■■□□ 2.05
NPHP4-206ENST00000468253 PLEKHG5O94827 1062 aa27.86■■■□□ 2.05
NPHP4-206ENST00000468253 QTRT2Q9H974 415 aaKnown RBP27.86■■■□□ 2.05
NPHP4-206ENST00000468253 GCP02774 474 aa27.84■■■□□ 2.05
NPHP4-206ENST00000468253 A0A1W2PP64 1363 aa27.83■■■□□ 2.05
NPHP4-206ENST00000468253 UNC5CLQ8IV45 518 aa27.82■■■□□ 2.04
NPHP4-206ENST00000468253 TRPC5Q9UL62 973 aaPredicted RBP27.82■■■□□ 2.04
NPHP4-206ENST00000468253 ANKRD36BQ8N2N9 1353 aa27.82■■■□□ 2.04
NPHP4-206ENST00000468253 EDC4Q6P2E9 1401 aaKnown RBP27.82■■■□□ 2.04
NPHP4-206ENST00000468253 RXRBP28702 533 aa27.81■■■□□ 2.04
NPHP4-206ENST00000468253 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.8■■■□□ 2.04
NPHP4-206ENST00000468253 USP31Q70CQ4 1352 aa27.8■■■□□ 2.04
NPHP4-206ENST00000468253 BCL9LQ86UU0 1499 aa27.79■■■□□ 2.04
NPHP4-206ENST00000468253 KCNH5Q8NCM2 988 aa27.79■■■□□ 2.04
NPHP4-206ENST00000468253 SLIT2O94813 1529 aa27.78■■■□□ 2.04
NPHP4-206ENST00000468253 RBM6P78332 1123 aaKnown RBP27.78■■■□□ 2.04
NPHP4-206ENST00000468253 PRDM11Q9NQV5 511 aa27.78■■■□□ 2.04
NPHP4-206ENST00000468253 CPDO75976 1380 aa27.77■■■□□ 2.04
NPHP4-206ENST00000468253 ZC3H6P61129 1189 aaKnown RBP27.77■■■□□ 2.04
NPHP4-206ENST00000468253 C11orf95C9JLR9 678 aaPredicted RBP27.75■■■□□ 2.03
NPHP4-206ENST00000468253 AKAP12Q02952 1782 aa27.75■■■□□ 2.03
NPHP4-206ENST00000468253 KIAA0232Q92628 1395 aa27.74■■■□□ 2.03
NPHP4-206ENST00000468253 NME9Q86XW9 330 aa27.74■■■□□ 2.03
NPHP4-206ENST00000468253 BTG4Q9NY30 223 aa27.73■■■□□ 2.03
NPHP4-206ENST00000468253 VPS72Q15906 364 aa27.72■■■□□ 2.03
NPHP4-206ENST00000468253 CARD14Q9BXL6 1004 aa27.72■■■□□ 2.03
NPHP4-206ENST00000468253 ATRNO75882 1429 aa27.72■■■□□ 2.03
NPHP4-206ENST00000468253 GJD4Q96KN9 370 aaPredicted RBP27.71■■■□□ 2.03
NPHP4-206ENST00000468253 ZRANB1Q9UGI0 708 aa27.71■■■□□ 2.03
NPHP4-206ENST00000468253 POLR3GLQ9BT43 218 aa27.7■■■□□ 2.02
NPHP4-206ENST00000468253 FYB1O15117 783 aa27.69■■■□□ 2.02
NPHP4-206ENST00000468253 CHRNA2Q15822 529 aa27.69■■■□□ 2.02
NPHP4-206ENST00000468253 ARHGEF25Q86VW2 580 aa27.69■■■□□ 2.02
NPHP4-206ENST00000468253 MON2Q7Z3U7 1717 aa27.69■■■□□ 2.02
NPHP4-206ENST00000468253 MARF1Q9Y4F3 1742 aaKnown RBP27.69■■■□□ 2.02
NPHP4-206ENST00000468253 SLIT3O75094 1523 aa27.67■■■□□ 2.02
NPHP4-206ENST00000468253 COG3Q96JB2 828 aa27.67■■■□□ 2.02
NPHP4-206ENST00000468253 ABCA3Q99758 1704 aa27.67■■■□□ 2.02
NPHP4-206ENST00000468253 CRYBG1Q9Y4K1 1723 aa27.67■■■□□ 2.02
NPHP4-206ENST00000468253 AATKQ6ZMQ8 1374 aa27.66■■■□□ 2.02
NPHP4-206ENST00000468253 PIK3C2AO00443 1686 aa27.65■■■□□ 2.02
NPHP4-206ENST00000468253 NRKQ7Z2Y5 1582 aa27.65■■■□□ 2.02
NPHP4-206ENST00000468253 CDK12Q9NYV4 1490 aaPredicted RBP27.64■■■□□ 2.02
NPHP4-206ENST00000468253 ZEB1P37275 1124 aaPredicted RBP27.64■■■□□ 2.02
NPHP4-206ENST00000468253 PANK3Q9H999 370 aa27.64■■■□□ 2.02
NPHP4-206ENST00000468253 KIF7Q2M1P5 1343 aa27.64■■■□□ 2.01
NPHP4-206ENST00000468253 ONECUT3O60422 494 aaPredicted RBP27.63■■■□□ 2.01
NPHP4-206ENST00000468253 EVA1CP58658 441 aa27.63■■■□□ 2.01
NPHP4-206ENST00000468253 COL14A1Q05707 1796 aaKnown RBP27.63■■■□□ 2.01
NPHP4-206ENST00000468253 SOCS7O14512 581 aa27.62■■■□□ 2.01
NPHP4-206ENST00000468253 PHRF1Q9P1Y6 1649 aaKnown RBP27.61■■■□□ 2.01
NPHP4-206ENST00000468253 OVOS2A0A0J9YW53 1432 aa27.6■■■□□ 2.01
NPHP4-206ENST00000468253 OVOS2Q6IE36 1432 aa27.6■■■□□ 2.01
NPHP4-206ENST00000468253 NWD2Q9ULI1 1742 aa27.59■■■□□ 2.01
NPHP4-206ENST00000468253 CCDC9Q9Y3X0 531 aaKnown RBP27.59■■■□□ 2.01
NPHP4-206ENST00000468253 CGNL1Q0VF96 1302 aa27.59■■■□□ 2.01
NPHP4-206ENST00000468253 SOX12O15370 315 aa27.58■■■□□ 2.01
NPHP4-206ENST00000468253 GGNBP2Q9H3C7 697 aa27.58■■■□□ 2.01
NPHP4-206ENST00000468253 SPATA31A5Q5VU36 1347 aa27.58■■■□□ 2.01
NPHP4-206ENST00000468253 SPATA31A7Q8IWB4 1347 aa27.58■■■□□ 2.01
NPHP4-206ENST00000468253 AXIN2Q9Y2T1 843 aa27.57■■■□□ 2
NPHP4-206ENST00000468253 NSD3Q9BZ95 1437 aa27.57■■■□□ 2
NPHP4-206ENST00000468253 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.56■■■□□ 2
NPHP4-206ENST00000468253 STRN4Q9NRL3 753 aa27.56■■■□□ 2
NPHP4-206ENST00000468253 ZBTB7CA1YPR0 619 aa27.55■■■□□ 2
NPHP4-206ENST00000468253 CAMTA1Q9Y6Y1 1673 aa27.55■■■□□ 2
NPHP4-206ENST00000468253 NFAT5O94916 1531 aa27.54■■■□□ 2
NPHP4-206ENST00000468253 USP54Q70EL1 1684 aa27.54■■■□□ 2
NPHP4-206ENST00000468253 CCDC7Q96M83 1385 aa27.53■■■□□ 2
NPHP4-206ENST00000468253 SPATA31A1Q5TZJ5 1347 aa27.53■■■□□ 2
NPHP4-206ENST00000468253 WASHC2AQ641Q2 1341 aa27.53■■■□□ 2
NPHP4-206ENST00000468253 MYOM1P52179 1685 aa27.52■■■□□ 2
NPHP4-206ENST00000468253 LARP1Q6PKG0 1096 aaKnown RBP27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms