RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 CHD2O14647 1828 aaKnown RBP13.42□□□□□ -0.26
MSH5-213ENST00000468136 USP6P35125 1406 aa13.41□□□□□ -0.26
MSH5-213ENST00000468136 NCOA3Q9Y6Q9 1424 aa13.4□□□□□ -0.26
MSH5-213ENST00000468136 E9PSI1 815 aa13.4□□□□□ -0.26
MSH5-213ENST00000468136 DIAPH1O60610 1272 aaKnown RBP13.4□□□□□ -0.26
MSH5-213ENST00000468136 TNNT2P45379 298 aaPredicted RBP13.4□□□□□ -0.26
MSH5-213ENST00000468136 ACEP12821 1306 aa13.39□□□□□ -0.27
MSH5-213ENST00000468136 TTC21BQ7Z4L5 1316 aa13.39□□□□□ -0.27
MSH5-213ENST00000468136 WDR63Q8IWG1 891 aa13.39□□□□□ -0.27
MSH5-213ENST00000468136 CDK12Q9NYV4 1490 aaPredicted RBP13.39□□□□□ -0.27
MSH5-213ENST00000468136 NWD1Q149M9 1564 aa13.39□□□□□ -0.27
MSH5-213ENST00000468136 ADGRL3Q9HAR2 1447 aa13.39□□□□□ -0.27
MSH5-213ENST00000468136 SHPRHQ149N8 1683 aa13.38□□□□□ -0.27
MSH5-213ENST00000468136 COL3A1P02461 1466 aaPredicted RBP13.38□□□□□ -0.27
MSH5-213ENST00000468136 NKTRP30414 1462 aaKnown RBP13.38□□□□□ -0.27
MSH5-213ENST00000468136 USP31Q70CQ4 1352 aa13.38□□□□□ -0.27
MSH5-213ENST00000468136 APAF1O14727 1248 aa13.38□□□□□ -0.27
MSH5-213ENST00000468136 FCHSD2O94868 740 aa13.38□□□□□ -0.27
MSH5-213ENST00000468136 NEFMP07197 916 aa13.38□□□□□ -0.27
MSH5-213ENST00000468136 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.38□□□□□ -0.27
MSH5-213ENST00000468136 RCAN3Q9UKA8 241 aa13.38□□□□□ -0.27
MSH5-213ENST00000468136 LRRC7Q96NW7 1537 aa13.38□□□□□ -0.27
MSH5-213ENST00000468136 SSH2Q76I76 1423 aa13.38□□□□□ -0.27
MSH5-213ENST00000468136 U2AF1L5P0DN76 240 aaPredicted RBP13.37□□□□□ -0.27
MSH5-213ENST00000468136 ADRA2BP18089 450 aa13.37□□□□□ -0.27
MSH5-213ENST00000468136 U2AF1Q01081 240 aaKnown RBP eCLIP13.37□□□□□ -0.27
MSH5-213ENST00000468136 TRMT2AQ8IZ69 625 aaKnown RBP13.37□□□□□ -0.27
MSH5-213ENST00000468136 NGDNQ8NEJ9 315 aaKnown RBP13.37□□□□□ -0.27
MSH5-213ENST00000468136 PPP4R2Q9NY27 417 aa13.37□□□□□ -0.27
MSH5-213ENST00000468136 POLKQ9UBT6 870 aa13.37□□□□□ -0.27
MSH5-213ENST00000468136 KIF24Q5T7B8 1368 aa13.36□□□□□ -0.27
MSH5-213ENST00000468136 SLFN5Q08AF3 891 aa13.36□□□□□ -0.27
MSH5-213ENST00000468136 OVOS2A0A0J9YW53 1432 aa13.36□□□□□ -0.27
MSH5-213ENST00000468136 OVOS2Q6IE36 1432 aa13.36□□□□□ -0.27
MSH5-213ENST00000468136 NRKQ7Z2Y5 1582 aa13.36□□□□□ -0.27
MSH5-213ENST00000468136 FMN2Q9NZ56 1722 aa13.36□□□□□ -0.27
MSH5-213ENST00000468136 NME9Q86XW9 330 aa13.35□□□□□ -0.27
MSH5-213ENST00000468136 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.35□□□□□ -0.27
MSH5-213ENST00000468136 MAPK8IP3Q9UPT6 1336 aa13.35□□□□□ -0.27
MSH5-213ENST00000468136 IQSEC2Q5JU85 1478 aa13.35□□□□□ -0.27
MSH5-213ENST00000468136 DUSP27Q5VZP5 1158 aa13.34□□□□□ -0.27
MSH5-213ENST00000468136 TCP11L2Q8N4U5 519 aa13.34□□□□□ -0.27
MSH5-213ENST00000468136 CT47B1P0C2W7 299 aaPredicted RBP13.33□□□□□ -0.28
MSH5-213ENST00000468136 WWC1Q8IX03 1113 aa13.33□□□□□ -0.28
MSH5-213ENST00000468136 CCDC146Q8IYE0 955 aa13.33□□□□□ -0.28
MSH5-213ENST00000468136 SALL2Q9Y467 1007 aaPredicted RBP13.33□□□□□ -0.28
MSH5-213ENST00000468136 IL16Q14005 1332 aa13.33□□□□□ -0.28
MSH5-213ENST00000468136 U2SURPO15042 1029 aaKnown RBP13.32□□□□□ -0.28
MSH5-213ENST00000468136 RRP1P56182 461 aaKnown RBP13.32□□□□□ -0.28
MSH5-213ENST00000468136 CALD1Q05682 793 aaKnown RBP13.32□□□□□ -0.28
MSH5-213ENST00000468136 MYH16Q9H6N6 1097 aa13.32□□□□□ -0.28
MSH5-213ENST00000468136 DCCP43146 1447 aa13.31□□□□□ -0.28
MSH5-213ENST00000468136 PIAS4Q8N2W9 510 aaPredicted RBP13.31□□□□□ -0.28
MSH5-213ENST00000468136 CDCA7LQ96GN5 454 aa13.31□□□□□ -0.28
MSH5-213ENST00000468136 PLEKHF1Q96S99 279 aa13.31□□□□□ -0.28
MSH5-213ENST00000468136 PHF8Q9UPP1 1060 aa13.31□□□□□ -0.28
MSH5-213ENST00000468136 NCKAP5LQ9HCH0 1330 aa13.31□□□□□ -0.28
MSH5-213ENST00000468136 C19orf44Q9H6X5 657 aa13.3□□□□□ -0.28
MSH5-213ENST00000468136 USP54Q70EL1 1684 aa13.3□□□□□ -0.28
MSH5-213ENST00000468136 NALCNQ8IZF0 1738 aa13.3□□□□□ -0.28
MSH5-213ENST00000468136 IL13P35225 146 aa13.29□□□□□ -0.28
MSH5-213ENST00000468136 LMOD3Q0VAK6 560 aa13.29□□□□□ -0.28
MSH5-213ENST00000468136 MAP2P11137 1827 aaKnown RBP13.29□□□□□ -0.28
MSH5-213ENST00000468136 TMPOP42166 694 aaKnown RBP13.28□□□□□ -0.28
MSH5-213ENST00000468136 PROSER2Q86WR7 435 aaPredicted RBP13.28□□□□□ -0.28
MSH5-213ENST00000468136 C14orf37Q86TY3 774 aa13.27□□□□□ -0.29
MSH5-213ENST00000468136 PMFBP1Q8TBY8 1022 aa13.27□□□□□ -0.29
MSH5-213ENST00000468136 SBNO1A3KN83 1393 aa13.27□□□□□ -0.29
MSH5-213ENST00000468136 FLT4P35916 1363 aa13.27□□□□□ -0.29
MSH5-213ENST00000468136 NUTM2FA1L443 756 aa13.26□□□□□ -0.29
MSH5-213ENST00000468136 RTL1A6NKG5 1358 aa13.26□□□□□ -0.29
MSH5-213ENST00000468136 PPM1GO15355 546 aaPredicted RBP13.26□□□□□ -0.29
MSH5-213ENST00000468136 RSPH6AQ9H0K4 717 aa13.26□□□□□ -0.29
MSH5-213ENST00000468136 EMILIN1Q9Y6C2 1016 aa13.26□□□□□ -0.29
MSH5-213ENST00000468136 KCNH5Q8NCM2 988 aa13.25□□□□□ -0.29
MSH5-213ENST00000468136 KIF1AQ12756 1690 aa13.24□□□□□ -0.29
MSH5-213ENST00000468136 NLRP6P59044 892 aa13.24□□□□□ -0.29
MSH5-213ENST00000468136 PSME1Q06323 249 aa13.24□□□□□ -0.29
MSH5-213ENST00000468136 AAMPQ13685 434 aa13.24□□□□□ -0.29
MSH5-213ENST00000468136 NFE2L2Q16236 605 aa13.24□□□□□ -0.29
MSH5-213ENST00000468136 CADPS2Q86UW7 1296 aa13.24□□□□□ -0.29
MSH5-213ENST00000468136 ZNF428Q96B54 188 aa13.24□□□□□ -0.29
MSH5-213ENST00000468136 MST1RQ04912 1400 aa13.23□□□□□ -0.29
MSH5-213ENST00000468136 ARHGEF10O15013 1369 aa13.23□□□□□ -0.29
MSH5-213ENST00000468136 ATF3P18847 181 aa13.23□□□□□ -0.29
MSH5-213ENST00000468136 ABTB2Q8N961 1025 aa13.23□□□□□ -0.29
MSH5-213ENST00000468136 ZRANB1Q9UGI0 708 aa13.23□□□□□ -0.29
MSH5-213ENST00000468136 MS4A1P11836 297 aa13.22□□□□□ -0.29
MSH5-213ENST00000468136 PRKAR2BP31323 418 aa13.22□□□□□ -0.29
MSH5-213ENST00000468136 RIPK4P57078 832 aa13.22□□□□□ -0.29
MSH5-213ENST00000468136 RRS1Q15050 365 aaKnown RBP13.22□□□□□ -0.29
MSH5-213ENST00000468136 ESCO1Q5FWF5 840 aa13.22□□□□□ -0.29
MSH5-213ENST00000468136 MAP3K19Q56UN5 1328 aa13.21□□□□□ -0.29
MSH5-213ENST00000468136 MSH5O43196 834 aa13.21□□□□□ -0.29
MSH5-213ENST00000468136 AMPHP49418 695 aa13.21□□□□□ -0.29
MSH5-213ENST00000468136 HAP1P54257 671 aaPredicted RBP13.21□□□□□ -0.29
MSH5-213ENST00000468136 DMRT2Q9Y5R5 561 aa13.21□□□□□ -0.29
MSH5-213ENST00000468136 RGPD8O14715 1765 aaPredicted RBP13.21□□□□□ -0.29
MSH5-213ENST00000468136 PIK3C2AO00443 1686 aa13.21□□□□□ -0.3
MSH5-213ENST00000468136 KDM4FA0A1W2PPD8 638 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms