RNA–Protein interactions for RNA: ENST00000468031.1

NME4-210, Transcript of NME/NM23 nucleoside diphosphate kinase 4, humanhuman

TSL 2

Gene NME4, Length 1,861 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME4-210ENST00000468031 WDR63Q8IWG1 891 aa24.56■■□□□ 1.52
NME4-210ENST00000468031 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.55■■□□□ 1.52
NME4-210ENST00000468031 PLIN1O60240 522 aa24.55■■□□□ 1.52
NME4-210ENST00000468031 THEMISQ8N1K5 641 aaPredicted RBP24.55■■□□□ 1.52
NME4-210ENST00000468031 DMRT2Q9Y5R5 561 aa24.55■■□□□ 1.52
NME4-210ENST00000468031 ITSN1Q15811 1721 aa24.55■■□□□ 1.52
NME4-210ENST00000468031 TBX22Q9Y458 520 aa24.53■■□□□ 1.52
NME4-210ENST00000468031 PTPRUQ92729 1446 aa24.53■■□□□ 1.52
NME4-210ENST00000468031 TOPAZ1Q8N9V7 1692 aa24.53■■□□□ 1.52
NME4-210ENST00000468031 PTCH1Q13635 1447 aa24.53■■□□□ 1.52
NME4-210ENST00000468031 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.51■■□□□ 1.51
NME4-210ENST00000468031 ZNF692Q9BU19 519 aaPredicted RBP24.51■■□□□ 1.51
NME4-210ENST00000468031 CRBNQ96SW2 442 aa24.5■■□□□ 1.51
NME4-210ENST00000468031 PRR36Q9H6K5 1346 aa24.5■■□□□ 1.51
NME4-210ENST00000468031 DIAPH1O60610 1272 aaKnown RBP24.49■■□□□ 1.51
NME4-210ENST00000468031 PLEKHF1Q96S99 279 aa24.49■■□□□ 1.51
NME4-210ENST00000468031 AATKQ6ZMQ8 1374 aa24.49■■□□□ 1.51
NME4-210ENST00000468031 RRP7AQ9Y3A4 280 aaKnown RBP24.49■■□□□ 1.51
NME4-210ENST00000468031 PNNQ9H307 717 aaKnown RBP24.48■■□□□ 1.51
NME4-210ENST00000468031 CEP170BQ9Y4F5 1589 aaPredicted RBP24.48■■□□□ 1.51
NME4-210ENST00000468031 SLC26A8Q96RN1 970 aa24.47■■□□□ 1.51
NME4-210ENST00000468031 U2SURPO15042 1029 aaKnown RBP24.47■■□□□ 1.51
NME4-210ENST00000468031 NEUROD2Q15784 382 aa24.47■■□□□ 1.51
NME4-210ENST00000468031 POLKQ9UBT6 870 aa24.47■■□□□ 1.51
NME4-210ENST00000468031 MAP2P11137 1827 aaKnown RBP24.46■■□□□ 1.51
NME4-210ENST00000468031 NRKQ7Z2Y5 1582 aa24.46■■□□□ 1.51
NME4-210ENST00000468031 CDK12Q9NYV4 1490 aaPredicted RBP24.45■■□□□ 1.5
NME4-210ENST00000468031 XRN1Q8IZH2 1706 aaKnown RBP24.45■■□□□ 1.5
NME4-210ENST00000468031 C20orf194Q5TEA3 1177 aa24.45■■□□□ 1.5
NME4-210ENST00000468031 PLEKHG3A1L390 1219 aa24.44■■□□□ 1.5
NME4-210ENST00000468031 NME9Q86XW9 330 aa24.44■■□□□ 1.5
NME4-210ENST00000468031 AMOTL2Q9Y2J4 779 aa24.44■■□□□ 1.5
NME4-210ENST00000468031 NCKAP5LQ9HCH0 1330 aa24.43■■□□□ 1.5
NME4-210ENST00000468031 MAPK8IP3Q9UPT6 1336 aa24.43■■□□□ 1.5
NME4-210ENST00000468031 RIMS1Q86UR5 1692 aaKnown RBP24.43■■□□□ 1.5
NME4-210ENST00000468031 PIK3R4Q99570 1358 aa24.42■■□□□ 1.5
NME4-210ENST00000468031 COG3Q96JB2 828 aa24.42■■□□□ 1.5
NME4-210ENST00000468031 MYH16Q9H6N6 1097 aa24.42■■□□□ 1.5
NME4-210ENST00000468031 FCHSD2O94868 740 aa24.41■■□□□ 1.5
NME4-210ENST00000468031 TMPOP42166 694 aaKnown RBP24.41■■□□□ 1.5
NME4-210ENST00000468031 PLPPR3Q6T4P5 718 aa24.41■■□□□ 1.5
NME4-210ENST00000468031 ZNF142P52746 1687 aaPredicted RBP24.4■■□□□ 1.5
NME4-210ENST00000468031 LRRC7Q96NW7 1537 aa24.4■■□□□ 1.5
NME4-210ENST00000468031 BCAR3O75815 825 aa24.38■■□□□ 1.49
NME4-210ENST00000468031 ADAMTSL3P82987 1691 aa24.37■■□□□ 1.49
NME4-210ENST00000468031 IL16Q14005 1332 aa24.37■■□□□ 1.49
NME4-210ENST00000468031 USP6P35125 1406 aa24.37■■□□□ 1.49
NME4-210ENST00000468031 PDE3AQ14432 1141 aa24.37■■□□□ 1.49
NME4-210ENST00000468031 ACEP12821 1306 aa24.36■■□□□ 1.49
NME4-210ENST00000468031 TTC21BQ7Z4L5 1316 aa24.36■■□□□ 1.49
NME4-210ENST00000468031 CT47B1P0C2W7 299 aaPredicted RBP24.36■■□□□ 1.49
NME4-210ENST00000468031 TRIM35Q9UPQ4 493 aa24.36■■□□□ 1.49
NME4-210ENST00000468031 FANCIQ9NVI1 1328 aa24.35■■□□□ 1.49
NME4-210ENST00000468031 RSPH6AQ9H0K4 717 aa24.35■■□□□ 1.49
NME4-210ENST00000468031 OVOS2A0A0J9YW53 1432 aa24.35■■□□□ 1.49
NME4-210ENST00000468031 OVOS2Q6IE36 1432 aa24.35■■□□□ 1.49
NME4-210ENST00000468031 ZRANB1Q9UGI0 708 aa24.34■■□□□ 1.49
NME4-210ENST00000468031 EMILIN1Q9Y6C2 1016 aa24.34■■□□□ 1.49
NME4-210ENST00000468031 RARSP54136 660 aaKnown RBP24.34■■□□□ 1.49
NME4-210ENST00000468031 SSH2Q76I76 1423 aa24.34■■□□□ 1.49
NME4-210ENST00000468031 NALCNQ8IZF0 1738 aa24.34■■□□□ 1.49
NME4-210ENST00000468031 PPM1GO15355 546 aaPredicted RBP24.33■■□□□ 1.49
NME4-210ENST00000468031 FBLN1P23142 703 aa24.33■■□□□ 1.49
NME4-210ENST00000468031 IL13P35225 146 aa24.33■■□□□ 1.49
NME4-210ENST00000468031 TCERG1O14776 1098 aaKnown RBP24.32■■□□□ 1.48
NME4-210ENST00000468031 KDM2BQ8NHM5 1336 aa24.31■■□□□ 1.48
NME4-210ENST00000468031 ANKARQ7Z5J8 1434 aa24.31■■□□□ 1.48
NME4-210ENST00000468031 NEFMP07197 916 aa24.3■■□□□ 1.48
NME4-210ENST00000468031 RIPK4P57078 832 aa24.3■■□□□ 1.48
NME4-210ENST00000468031 PRKAR2BP31323 418 aa24.29■■□□□ 1.48
NME4-210ENST00000468031 TTC21AQ8NDW8 1320 aa24.29■■□□□ 1.48
NME4-210ENST00000468031 SETD1BQ9UPS6 1966 aaKnown RBP24.28■■□□□ 1.48
NME4-210ENST00000468031 CENPQQ7L2Z9 268 aaPredicted RBP24.28■■□□□ 1.48
NME4-210ENST00000468031 USP31Q70CQ4 1352 aa24.28■■□□□ 1.48
NME4-210ENST00000468031 MS4A1P11836 297 aa24.26■■□□□ 1.47
NME4-210ENST00000468031 CANXP27824 592 aaKnown RBP24.26■■□□□ 1.47
NME4-210ENST00000468031 ANKLE2Q86XL3 938 aa24.26■■□□□ 1.47
NME4-210ENST00000468031 FMN2Q9NZ56 1722 aa24.26■■□□□ 1.47
NME4-210ENST00000468031 CHD2O14647 1828 aaKnown RBP24.26■■□□□ 1.47
NME4-210ENST00000468031 RRS1Q15050 365 aaKnown RBP24.26■■□□□ 1.47
NME4-210ENST00000468031 NUTM2FA1L443 756 aa24.25■■□□□ 1.47
NME4-210ENST00000468031 KCNA6P17658 529 aa24.25■■□□□ 1.47
NME4-210ENST00000468031 AAMPQ13685 434 aa24.25■■□□□ 1.47
NME4-210ENST00000468031 NFE2L2Q16236 605 aa24.25■■□□□ 1.47
NME4-210ENST00000468031 RGPD8O14715 1765 aaPredicted RBP24.24■■□□□ 1.47
NME4-210ENST00000468031 TSR2Q969E8 191 aaKnown RBP24.21■■□□□ 1.47
NME4-210ENST00000468031 HMOX1P09601 288 aa24.21■■□□□ 1.47
NME4-210ENST00000468031 CALD1Q05682 793 aaKnown RBP24.2■■□□□ 1.46
NME4-210ENST00000468031 EXOSC9Q06265 439 aaKnown RBP24.19■■□□□ 1.46
NME4-210ENST00000468031 FRAT1Q92837 279 aaPredicted RBP24.19■■□□□ 1.46
NME4-210ENST00000468031 PHACTR3Q96KR7 559 aa24.19■■□□□ 1.46
NME4-210ENST00000468031 NGDNQ8NEJ9 315 aaKnown RBP24.19■■□□□ 1.46
NME4-210ENST00000468031 PEAK1Q9H792 1746 aa24.19■■□□□ 1.46
NME4-210ENST00000468031 PMFBP1Q8TBY8 1022 aa24.18■■□□□ 1.46
NME4-210ENST00000468031 PANK1Q8TE04 598 aa24.18■■□□□ 1.46
NME4-210ENST00000468031 USP54Q70EL1 1684 aa24.17■■□□□ 1.46
NME4-210ENST00000468031 LMOD3Q0VAK6 560 aa24.17■■□□□ 1.46
NME4-210ENST00000468031 CLUAP1Q96AJ1 413 aa24.17■■□□□ 1.46
NME4-210ENST00000468031 RGPD1P0DJD0 1748 aa24.17■■□□□ 1.46
NME4-210ENST00000468031 PIK3C2AO00443 1686 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms