RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 NRKQ7Z2Y5 1582 aa25■■□□□ 1.59
CHRNA4-203ENST00000467563 CCDC146Q8IYE0 955 aa24.98■■□□□ 1.59
CHRNA4-203ENST00000467563 ADGRL3Q9HAR2 1447 aa24.98■■□□□ 1.59
CHRNA4-203ENST00000467563 TTC21BQ7Z4L5 1316 aa24.98■■□□□ 1.59
CHRNA4-203ENST00000467563 FBLN1P23142 703 aa24.97■■□□□ 1.59
CHRNA4-203ENST00000467563 NUDCQ9Y266 331 aa24.97■■□□□ 1.59
CHRNA4-203ENST00000467563 SUPT16HQ9Y5B9 1047 aaKnown RBP24.97■■□□□ 1.59
CHRNA4-203ENST00000467563 SSH2Q76I76 1423 aa24.95■■□□□ 1.59
CHRNA4-203ENST00000467563 COL3A1P02461 1466 aaPredicted RBP24.95■■□□□ 1.59
CHRNA4-203ENST00000467563 COG3Q96JB2 828 aa24.94■■□□□ 1.58
CHRNA4-203ENST00000467563 LMTK3Q96Q04 1460 aa24.94■■□□□ 1.58
CHRNA4-203ENST00000467563 NGDNQ8NEJ9 315 aaKnown RBP24.93■■□□□ 1.58
CHRNA4-203ENST00000467563 POLKQ9UBT6 870 aa24.93■■□□□ 1.58
CHRNA4-203ENST00000467563 PNPLA6Q8IY17 1366 aa24.92■■□□□ 1.58
CHRNA4-203ENST00000467563 PDE3BQ13370 1112 aa24.92■■□□□ 1.58
CHRNA4-203ENST00000467563 APAF1O14727 1248 aa24.9■■□□□ 1.58
CHRNA4-203ENST00000467563 PROSER2Q86WR7 435 aaPredicted RBP24.9■■□□□ 1.58
CHRNA4-203ENST00000467563 AATKQ6ZMQ8 1374 aa24.89■■□□□ 1.58
CHRNA4-203ENST00000467563 C14orf37Q86TY3 774 aa24.89■■□□□ 1.58
CHRNA4-203ENST00000467563 CDCA7LQ96GN5 454 aa24.89■■□□□ 1.58
CHRNA4-203ENST00000467563 FKBP8Q14318 412 aa24.89■■□□□ 1.57
CHRNA4-203ENST00000467563 OVOS2A0A0J9YW53 1432 aa24.88■■□□□ 1.57
CHRNA4-203ENST00000467563 OVOS2Q6IE36 1432 aa24.88■■□□□ 1.57
CHRNA4-203ENST00000467563 EMILIN1Q9Y6C2 1016 aa24.87■■□□□ 1.57
CHRNA4-203ENST00000467563 MAP2P11137 1827 aaKnown RBP24.87■■□□□ 1.57
CHRNA4-203ENST00000467563 TTC21AQ8NDW8 1320 aa24.87■■□□□ 1.57
CHRNA4-203ENST00000467563 ZNF521Q96K83 1311 aa24.87■■□□□ 1.57
CHRNA4-203ENST00000467563 U2AF1L5P0DN76 240 aaPredicted RBP24.87■■□□□ 1.57
CHRNA4-203ENST00000467563 U2AF1Q01081 240 aaKnown RBP eCLIP24.87■■□□□ 1.57
CHRNA4-203ENST00000467563 PPM1GO15355 546 aaPredicted RBP24.86■■□□□ 1.57
CHRNA4-203ENST00000467563 NEFLP07196 543 aa24.86■■□□□ 1.57
CHRNA4-203ENST00000467563 RUNDC1Q96C34 613 aa24.85■■□□□ 1.57
CHRNA4-203ENST00000467563 PHF8Q9UPP1 1060 aa24.85■■□□□ 1.57
CHRNA4-203ENST00000467563 DIAPH1O60610 1272 aaKnown RBP24.84■■□□□ 1.57
CHRNA4-203ENST00000467563 STRCP1A6NGW2 1772 aa24.84■■□□□ 1.57
CHRNA4-203ENST00000467563 RRS1Q15050 365 aaKnown RBP24.84■■□□□ 1.57
CHRNA4-203ENST00000467563 U2SURPO15042 1029 aaKnown RBP24.83■■□□□ 1.57
CHRNA4-203ENST00000467563 CDK12Q9NYV4 1490 aaPredicted RBP24.81■■□□□ 1.56
CHRNA4-203ENST00000467563 STRCQ7RTU9 1775 aa24.81■■□□□ 1.56
CHRNA4-203ENST00000467563 IQSEC2Q5JU85 1478 aa24.81■■□□□ 1.56
CHRNA4-203ENST00000467563 USP31Q70CQ4 1352 aa24.81■■□□□ 1.56
CHRNA4-203ENST00000467563 ESCO1Q5FWF5 840 aa24.81■■□□□ 1.56
CHRNA4-203ENST00000467563 PIK3C2AO00443 1686 aa24.79■■□□□ 1.56
CHRNA4-203ENST00000467563 TCP11L2Q8N4U5 519 aa24.79■■□□□ 1.56
CHRNA4-203ENST00000467563 TMEM94Q12767 1356 aa24.79■■□□□ 1.56
CHRNA4-203ENST00000467563 NGEFQ8N5V2 710 aa24.79■■□□□ 1.56
CHRNA4-203ENST00000467563 C19orf44Q9H6X5 657 aa24.79■■□□□ 1.56
CHRNA4-203ENST00000467563 GOLGA2Q08379 1002 aa24.77■■□□□ 1.56
CHRNA4-203ENST00000467563 PLEKHF1Q96S99 279 aa24.77■■□□□ 1.56
CHRNA4-203ENST00000467563 IRX6P78412 446 aaPredicted RBP24.76■■□□□ 1.55
CHRNA4-203ENST00000467563 ORAI2Q96SN7 254 aa24.76■■□□□ 1.55
CHRNA4-203ENST00000467563 RRP7AQ9Y3A4 280 aaKnown RBP24.76■■□□□ 1.55
CHRNA4-203ENST00000467563 IL13P35225 146 aa24.74■■□□□ 1.55
CHRNA4-203ENST00000467563 NEUROD2Q15784 382 aa24.74■■□□□ 1.55
CHRNA4-203ENST00000467563 WWC1Q8IX03 1113 aa24.74■■□□□ 1.55
CHRNA4-203ENST00000467563 RNF123Q5XPI4 1314 aa24.73■■□□□ 1.55
CHRNA4-203ENST00000467563 SOX12O15370 315 aa24.73■■□□□ 1.55
CHRNA4-203ENST00000467563 PAK3O75914 559 aaPredicted RBP24.73■■□□□ 1.55
CHRNA4-203ENST00000467563 NLRP6P59044 892 aa24.73■■□□□ 1.55
CHRNA4-203ENST00000467563 NCOA3Q9Y6Q9 1424 aa24.73■■□□□ 1.55
CHRNA4-203ENST00000467563 DUSP27Q5VZP5 1158 aa24.73■■□□□ 1.55
CHRNA4-203ENST00000467563 SPINK5Q9NQ38 1064 aaPredicted RBP24.73■■□□□ 1.55
CHRNA4-203ENST00000467563 DMRT2Q9Y5R5 561 aa24.73■■□□□ 1.55
CHRNA4-203ENST00000467563 SLFN5Q08AF3 891 aa24.72■■□□□ 1.55
CHRNA4-203ENST00000467563 NUTM2GQ5VZR2 741 aa24.72■■□□□ 1.55
CHRNA4-203ENST00000467563 PHF23Q9BUL5 403 aaPredicted RBP24.72■■□□□ 1.55
CHRNA4-203ENST00000467563 C1orf167Q5SNV9 1468 aa24.72■■□□□ 1.55
CHRNA4-203ENST00000467563 ABTB2Q8N961 1025 aa24.71■■□□□ 1.55
CHRNA4-203ENST00000467563 PSME1Q06323 249 aa24.71■■□□□ 1.55
CHRNA4-203ENST00000467563 PEAK1Q9H792 1746 aa24.7■■□□□ 1.54
CHRNA4-203ENST00000467563 MARF1Q9Y4F3 1742 aaKnown RBP24.7■■□□□ 1.54
CHRNA4-203ENST00000467563 RCAN3Q9UKA8 241 aa24.7■■□□□ 1.54
CHRNA4-203ENST00000467563 FCHSD2O94868 740 aa24.7■■□□□ 1.54
CHRNA4-203ENST00000467563 TRMT2AQ8IZ69 625 aaKnown RBP24.7■■□□□ 1.54
CHRNA4-203ENST00000467563 FOXO3O43524 673 aa24.69■■□□□ 1.54
CHRNA4-203ENST00000467563 RSPH6AQ9H0K4 717 aa24.69■■□□□ 1.54
CHRNA4-203ENST00000467563 USP54Q70EL1 1684 aa24.69■■□□□ 1.54
CHRNA4-203ENST00000467563 MAP3K19Q56UN5 1328 aa24.69■■□□□ 1.54
CHRNA4-203ENST00000467563 DCCP43146 1447 aa24.69■■□□□ 1.54
CHRNA4-203ENST00000467563 LRRC7Q96NW7 1537 aa24.68■■□□□ 1.54
CHRNA4-203ENST00000467563 ATF3P18847 181 aa24.68■■□□□ 1.54
CHRNA4-203ENST00000467563 CCDC27Q2M243 656 aa24.68■■□□□ 1.54
CHRNA4-203ENST00000467563 MST1RQ04912 1400 aa24.67■■□□□ 1.54
CHRNA4-203ENST00000467563 NCBP3Q53F19 620 aaKnown RBP24.67■■□□□ 1.54
CHRNA4-203ENST00000467563 MAPK8IP3Q9UPT6 1336 aa24.67■■□□□ 1.54
CHRNA4-203ENST00000467563 HMOX1P09601 288 aa24.66■■□□□ 1.54
CHRNA4-203ENST00000467563 HSP90AB2PQ58FF8 381 aa24.66■■□□□ 1.54
CHRNA4-203ENST00000467563 PNNQ9H307 717 aaKnown RBP24.66■■□□□ 1.54
CHRNA4-203ENST00000467563 E9PSI1 815 aa24.65■■□□□ 1.54
CHRNA4-203ENST00000467563 PRKAR2BP31323 418 aa24.65■■□□□ 1.54
CHRNA4-203ENST00000467563 TMPOP42166 694 aaKnown RBP24.65■■□□□ 1.54
CHRNA4-203ENST00000467563 EIF4A2Q14240 407 aaKnown RBP24.65■■□□□ 1.54
CHRNA4-203ENST00000467563 XPCQ01831 940 aaPredicted RBP24.65■■□□□ 1.54
CHRNA4-203ENST00000467563 ZNF335Q9H4Z2 1342 aaPredicted RBP24.64■■□□□ 1.54
CHRNA4-203ENST00000467563 SBNO1A3KN83 1393 aa24.63■■□□□ 1.53
CHRNA4-203ENST00000467563 XIRP1Q702N8 1843 aaKnown RBP24.62■■□□□ 1.53
CHRNA4-203ENST00000467563 WDR63Q8IWG1 891 aa24.62■■□□□ 1.53
CHRNA4-203ENST00000467563 KIF1AQ12756 1690 aa24.62■■□□□ 1.53
CHRNA4-203ENST00000467563 CADPS2Q86UW7 1296 aa24.62■■□□□ 1.53
CHRNA4-203ENST00000467563 FLT4P35916 1363 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms