RNA–Protein interactions for RNA: ENST00000467529.5

TMEM254-209, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 1,963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-209ENST00000467529 ERICH6Q7L0X2 663 aa11.88□□□□□ -0.51
TMEM254-209ENST00000467529 PLEKHG3A1L390 1219 aa11.87□□□□□ -0.51
TMEM254-209ENST00000467529 PRKCSHP14314 528 aaPredicted RBP11.87□□□□□ -0.51
TMEM254-209ENST00000467529 NME9Q86XW9 330 aa11.87□□□□□ -0.51
TMEM254-209ENST00000467529 CHD2O14647 1828 aaKnown RBP11.87□□□□□ -0.51
TMEM254-209ENST00000467529 RUNDC1Q96C34 613 aa11.87□□□□□ -0.51
TMEM254-209ENST00000467529 RCAN3Q9UKA8 241 aa11.87□□□□□ -0.51
TMEM254-209ENST00000467529 GOLGA2Q08379 1002 aa11.86□□□□□ -0.51
TMEM254-209ENST00000467529 NGEFQ8N5V2 710 aa11.86□□□□□ -0.51
TMEM254-209ENST00000467529 ZRANB1Q9UGI0 708 aa11.86□□□□□ -0.51
TMEM254-209ENST00000467529 ACEP12821 1306 aa11.86□□□□□ -0.51
TMEM254-209ENST00000467529 NKTRP30414 1462 aaKnown RBP11.86□□□□□ -0.51
TMEM254-209ENST00000467529 NRKQ7Z2Y5 1582 aa11.85□□□□□ -0.51
TMEM254-209ENST00000467529 IQSEC2Q5JU85 1478 aa11.85□□□□□ -0.51
TMEM254-209ENST00000467529 PNPLA6Q8IY17 1366 aa11.85□□□□□ -0.51
TMEM254-209ENST00000467529 U2AF1L5P0DN76 240 aaPredicted RBP11.85□□□□□ -0.51
TMEM254-209ENST00000467529 FBLN1P23142 703 aa11.85□□□□□ -0.51
TMEM254-209ENST00000467529 U2AF1Q01081 240 aaKnown RBP eCLIP11.85□□□□□ -0.51
TMEM254-209ENST00000467529 POLKQ9UBT6 870 aa11.85□□□□□ -0.51
TMEM254-209ENST00000467529 MAP2P11137 1827 aaKnown RBP11.84□□□□□ -0.51
TMEM254-209ENST00000467529 RGPD8O14715 1765 aaPredicted RBP11.84□□□□□ -0.51
TMEM254-209ENST00000467529 SLFN5Q08AF3 891 aa11.84□□□□□ -0.51
TMEM254-209ENST00000467529 DUSP27Q5VZP5 1158 aa11.84□□□□□ -0.51
TMEM254-209ENST00000467529 PPP4R2Q9NY27 417 aa11.84□□□□□ -0.51
TMEM254-209ENST00000467529 NPHP4O75161 1426 aaPredicted RBP11.84□□□□□ -0.51
TMEM254-209ENST00000467529 TTC21BQ7Z4L5 1316 aa11.83□□□□□ -0.52
TMEM254-209ENST00000467529 TCP11L2Q8N4U5 519 aa11.83□□□□□ -0.52
TMEM254-209ENST00000467529 COG3Q96JB2 828 aa11.83□□□□□ -0.52
TMEM254-209ENST00000467529 USP6P35125 1406 aa11.83□□□□□ -0.52
TMEM254-209ENST00000467529 U2SURPO15042 1029 aaKnown RBP11.83□□□□□ -0.52
TMEM254-209ENST00000467529 DIAPH1O60610 1272 aaKnown RBP11.83□□□□□ -0.52
TMEM254-209ENST00000467529 RRP1P56182 461 aaKnown RBP11.83□□□□□ -0.52
TMEM254-209ENST00000467529 TRMT2AQ8IZ69 625 aaKnown RBP11.83□□□□□ -0.52
TMEM254-209ENST00000467529 AATKQ6ZMQ8 1374 aa11.82□□□□□ -0.52
TMEM254-209ENST00000467529 WWC1Q8IX03 1113 aa11.82□□□□□ -0.52
TMEM254-209ENST00000467529 SPINK5Q9NQ38 1064 aaPredicted RBP11.82□□□□□ -0.52
TMEM254-209ENST00000467529 FMN2Q9NZ56 1722 aa11.82□□□□□ -0.52
TMEM254-209ENST00000467529 PPM1GO15355 546 aaPredicted RBP11.81□□□□□ -0.52
TMEM254-209ENST00000467529 PMFBP1Q8TBY8 1022 aa11.81□□□□□ -0.52
TMEM254-209ENST00000467529 RRP7AQ9Y3A4 280 aaKnown RBP11.81□□□□□ -0.52
TMEM254-209ENST00000467529 DMRT2Q9Y5R5 561 aa11.81□□□□□ -0.52
TMEM254-209ENST00000467529 SSH2Q76I76 1423 aa11.81□□□□□ -0.52
TMEM254-209ENST00000467529 ANKARQ7Z5J8 1434 aa11.81□□□□□ -0.52
TMEM254-209ENST00000467529 NALCNQ8IZF0 1738 aa11.81□□□□□ -0.52
TMEM254-209ENST00000467529 NEUROD2Q15784 382 aa11.81□□□□□ -0.52
TMEM254-209ENST00000467529 NCBP3Q53F19 620 aaKnown RBP11.81□□□□□ -0.52
TMEM254-209ENST00000467529 EMILIN1Q9Y6C2 1016 aa11.81□□□□□ -0.52
TMEM254-209ENST00000467529 E9PSI1 815 aa11.8□□□□□ -0.52
TMEM254-209ENST00000467529 PLEKHF1Q96S99 279 aa11.8□□□□□ -0.52
TMEM254-209ENST00000467529 PHF23Q9BUL5 403 aaPredicted RBP11.8□□□□□ -0.52
TMEM254-209ENST00000467529 OVOS2A0A0J9YW53 1432 aa11.79□□□□□ -0.52
TMEM254-209ENST00000467529 OVOS2Q6IE36 1432 aa11.79□□□□□ -0.52
TMEM254-209ENST00000467529 CCDC27Q2M243 656 aa11.79□□□□□ -0.52
TMEM254-209ENST00000467529 NGDNQ8NEJ9 315 aaKnown RBP11.79□□□□□ -0.52
TMEM254-209ENST00000467529 CDK12Q9NYV4 1490 aaPredicted RBP11.79□□□□□ -0.52
TMEM254-209ENST00000467529 RRS1Q15050 365 aaKnown RBP11.78□□□□□ -0.52
TMEM254-209ENST00000467529 RBM33Q96EV2 1170 aaKnown RBP11.78□□□□□ -0.52
TMEM254-209ENST00000467529 TTC21AQ8NDW8 1320 aa11.78□□□□□ -0.52
TMEM254-209ENST00000467529 WDR63Q8IWG1 891 aa11.78□□□□□ -0.52
TMEM254-209ENST00000467529 B4GALNT3Q6L9W6 998 aa11.77□□□□□ -0.53
TMEM254-209ENST00000467529 NWD1Q149M9 1564 aa11.76□□□□□ -0.53
TMEM254-209ENST00000467529 IL13P35225 146 aa11.76□□□□□ -0.53
TMEM254-209ENST00000467529 PNNQ9H307 717 aaKnown RBP11.76□□□□□ -0.53
TMEM254-209ENST00000467529 ADGRL3Q9HAR2 1447 aa11.76□□□□□ -0.53
TMEM254-209ENST00000467529 MAPK8IP3Q9UPT6 1336 aa11.76□□□□□ -0.53
TMEM254-209ENST00000467529 USP31Q70CQ4 1352 aa11.76□□□□□ -0.53
TMEM254-209ENST00000467529 PLIN1O60240 522 aa11.76□□□□□ -0.53
TMEM254-209ENST00000467529 FCHSD2O94868 740 aa11.76□□□□□ -0.53
TMEM254-209ENST00000467529 TMPOP42166 694 aaKnown RBP11.76□□□□□ -0.53
TMEM254-209ENST00000467529 LRRC7Q96NW7 1537 aa11.75□□□□□ -0.53
TMEM254-209ENST00000467529 RSPH6AQ9H0K4 717 aa11.75□□□□□ -0.53
TMEM254-209ENST00000467529 PIK3C2AO00443 1686 aa11.74□□□□□ -0.53
TMEM254-209ENST00000467529 EXOC6Q8TAG9 804 aa11.74□□□□□ -0.53
TMEM254-209ENST00000467529 PHF8Q9UPP1 1060 aa11.74□□□□□ -0.53
TMEM254-209ENST00000467529 HMOX1P09601 288 aa11.73□□□□□ -0.53
TMEM254-209ENST00000467529 PRKAR2BP31323 418 aa11.73□□□□□ -0.53
TMEM254-209ENST00000467529 TRIM35Q9UPQ4 493 aa11.73□□□□□ -0.53
TMEM254-209ENST00000467529 PEAK1Q9H792 1746 aa11.73□□□□□ -0.53
TMEM254-209ENST00000467529 RIPK4P57078 832 aa11.72□□□□□ -0.53
TMEM254-209ENST00000467529 C14orf37Q86TY3 774 aa11.72□□□□□ -0.53
TMEM254-209ENST00000467529 SOX12O15370 315 aa11.71□□□□□ -0.53
TMEM254-209ENST00000467529 PROSER2Q86WR7 435 aaPredicted RBP11.71□□□□□ -0.53
TMEM254-209ENST00000467529 CCDC136Q96JN2 1154 aa11.71□□□□□ -0.53
TMEM254-209ENST00000467529 MARF1Q9Y4F3 1742 aaKnown RBP11.71□□□□□ -0.53
TMEM254-209ENST00000467529 USP54Q70EL1 1684 aa11.71□□□□□ -0.54
TMEM254-209ENST00000467529 NEFMP07197 916 aa11.7□□□□□ -0.54
TMEM254-209ENST00000467529 EIF4A2Q14240 407 aaKnown RBP11.7□□□□□ -0.54
TMEM254-209ENST00000467529 C20orf194Q5TEA3 1177 aa11.7□□□□□ -0.54
TMEM254-209ENST00000467529 PHACTR3Q96KR7 559 aa11.7□□□□□ -0.54
TMEM254-209ENST00000467529 NLRP6P59044 892 aa11.7□□□□□ -0.54
TMEM254-209ENST00000467529 ESCO1Q5FWF5 840 aa11.7□□□□□ -0.54
TMEM254-209ENST00000467529 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.7□□□□□ -0.54
TMEM254-209ENST00000467529 CRBNQ96SW2 442 aa11.7□□□□□ -0.54
TMEM254-209ENST00000467529 MYH16Q9H6N6 1097 aa11.7□□□□□ -0.54
TMEM254-209ENST00000467529 MAP3K19Q56UN5 1328 aa11.7□□□□□ -0.54
TMEM254-209ENST00000467529 BCAR3O75815 825 aa11.69□□□□□ -0.54
TMEM254-209ENST00000467529 HSPA2P54652 639 aa11.69□□□□□ -0.54
TMEM254-209ENST00000467529 HSP90AB2PQ58FF8 381 aa11.69□□□□□ -0.54
TMEM254-209ENST00000467529 TSHZ2Q9NRE2 1034 aa11.69□□□□□ -0.54
TMEM254-209ENST00000467529 IL16Q14005 1332 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms