RNA–Protein interactions for RNA: ENST00000467173.1

USP9X-206, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-206ENST00000467173 SPTLC1O15269 473 aa10.7□□□□□ -0.7
USP9X-206ENST00000467173 CTHP32929 405 aa10.7□□□□□ -0.7
USP9X-206ENST00000467173 AK7Q96M32 723 aa10.7□□□□□ -0.7
USP9X-206ENST00000467173 ZBTB3Q9H5J0 574 aa10.7□□□□□ -0.7
USP9X-206ENST00000467173 TRIM66O15016 1216 aa10.69□□□□□ -0.7
USP9X-206ENST00000467173 BMP1P13497 986 aa10.69□□□□□ -0.7
USP9X-206ENST00000467173 PRPF38BQ5VTL8 546 aaKnown RBP10.69□□□□□ -0.7
USP9X-206ENST00000467173 TRIM46Q7Z4K8 759 aa10.69□□□□□ -0.7
USP9X-206ENST00000467173 NPAS3Q8IXF0 933 aa10.69□□□□□ -0.7
USP9X-206ENST00000467173 FAM174AQ8TBP5 190 aa10.68□□□□□ -0.7
USP9X-206ENST00000467173 NXF1Q9UBU9 619 aaKnown RBP10.68□□□□□ -0.7
USP9X-206ENST00000467173 TLL2Q9Y6L7 1015 aa10.68□□□□□ -0.7
USP9X-206ENST00000467173 PCDHB15Q9Y5E8 787 aa10.67□□□□□ -0.7
USP9X-206ENST00000467173 HRCP23327 699 aa10.66□□□□□ -0.7
USP9X-206ENST00000467173 NNTQ13423 1086 aa10.66□□□□□ -0.7
USP9X-206ENST00000467173 RIC3Q7Z5B4 369 aa10.66□□□□□ -0.7
USP9X-206ENST00000467173 CFAP99D6REC4 459 aa10.65□□□□□ -0.7
USP9X-206ENST00000467173 ADH1CP00326 375 aa10.64□□□□□ -0.71
USP9X-206ENST00000467173 SCARF1Q14162 830 aa10.63□□□□□ -0.71
USP9X-206ENST00000467173 F12P00748 615 aaPredicted RBP10.62□□□□□ -0.71
USP9X-206ENST00000467173 LCE2CQ5TA81 110 aa10.62□□□□□ -0.71
USP9X-206ENST00000467173 IRF7Q92985 503 aa10.62□□□□□ -0.71
USP9X-206ENST00000467173 ZFP42Q96MM3 310 aa10.62□□□□□ -0.71
USP9X-206ENST00000467173 CDK15Q96Q40 435 aa10.62□□□□□ -0.71
USP9X-206ENST00000467173 WDR4P57081 412 aaKnown RBP10.61□□□□□ -0.71
USP9X-206ENST00000467173 TUSC1Q2TAM9 212 aa10.61□□□□□ -0.71
USP9X-206ENST00000467173 MRPL14Q6P1L8 145 aaKnown RBP10.61□□□□□ -0.71
USP9X-206ENST00000467173 TIMP2P16035 220 aa10.6□□□□□ -0.71
USP9X-206ENST00000467173 BPHLQ86WA6 291 aaPredicted RBP10.6□□□□□ -0.71
USP9X-206ENST00000467173 ARMC2Q8NEN0 867 aa10.6□□□□□ -0.71
USP9X-206ENST00000467173 MAP10Q9P2G4 905 aa10.6□□□□□ -0.71
USP9X-206ENST00000467173 FAM181BA6NEQ2 426 aa10.59□□□□□ -0.71
USP9X-206ENST00000467173 NR5A1Q13285 461 aa10.59□□□□□ -0.71
USP9X-206ENST00000467173 AGERQ15109 404 aa10.59□□□□□ -0.71
USP9X-206ENST00000467173 CABLES1Q8TDN4 633 aa10.59□□□□□ -0.71
USP9X-206ENST00000467173 FOXJ1Q92949 421 aa10.59□□□□□ -0.71
USP9X-206ENST00000467173 NUTM2BA6NNL0 878 aaPredicted RBP10.58□□□□□ -0.72
USP9X-206ENST00000467173 NUTM2EB1AL46 878 aaPredicted RBP10.58□□□□□ -0.72
USP9X-206ENST00000467173 ARID5BQ14865 1188 aa10.58□□□□□ -0.72
USP9X-206ENST00000467173 CSPP1Q1MSJ5 1256 aa10.58□□□□□ -0.72
USP9X-206ENST00000467173 NUTM2DQ5VT03 806 aaPredicted RBP10.58□□□□□ -0.72
USP9X-206ENST00000467173 NUTM2AQ8IVF1 878 aaPredicted RBP10.58□□□□□ -0.72
USP9X-206ENST00000467173 H3BM21 787 aa10.57□□□□□ -0.72
USP9X-206ENST00000467173 KLF16Q9BXK1 252 aaPredicted RBP10.57□□□□□ -0.72
USP9X-206ENST00000467173 PDE4DQ08499 809 aa10.56□□□□□ -0.72
USP9X-206ENST00000467173 MYSM1Q5VVJ2 828 aa10.56□□□□□ -0.72
USP9X-206ENST00000467173 TSC1Q92574 1164 aa10.56□□□□□ -0.72
USP9X-206ENST00000467173 HELBQ8NG08 1087 aaPredicted RBP10.55□□□□□ -0.72
USP9X-206ENST00000467173 PURBQ96QR8 312 aaKnown RBP10.55□□□□□ -0.72
USP9X-206ENST00000467173 PER1O15534 1290 aaPredicted RBP10.54□□□□□ -0.72
USP9X-206ENST00000467173 LILRB3O75022 631 aa10.54□□□□□ -0.72
USP9X-206ENST00000467173 GMPRP36959 345 aa10.54□□□□□ -0.72
USP9X-206ENST00000467173 NBPF14Q5TI25 921 aa10.54□□□□□ -0.72
USP9X-206ENST00000467173 LIMD1Q9UGP4 676 aa10.54□□□□□ -0.72
USP9X-206ENST00000467173 ZIC2O95409 532 aaPredicted RBP10.53□□□□□ -0.72
USP9X-206ENST00000467173 RSPH6AQ9H0K4 717 aa10.53□□□□□ -0.72
USP9X-206ENST00000467173 QPCTQ16769 361 aa10.52□□□□□ -0.73
USP9X-206ENST00000467173 UPP2O95045 317 aa10.51□□□□□ -0.73
USP9X-206ENST00000467173 GRM5P41594 1212 aa10.51□□□□□ -0.73
USP9X-206ENST00000467173 VEGFBP49765 207 aa10.51□□□□□ -0.73
USP9X-206ENST00000467173 C4orf48Q5BLP8 95 aa10.51□□□□□ -0.73
USP9X-206ENST00000467173 ZSCAN1Q8NBB4 408 aa10.5□□□□□ -0.73
USP9X-206ENST00000467173 ITPKCQ96DU7 683 aa10.5□□□□□ -0.73
USP9X-206ENST00000467173 C1QTNF2Q9BXJ5 285 aa10.5□□□□□ -0.73
USP9X-206ENST00000467173 ZFAND3Q9H8U3 227 aa10.5□□□□□ -0.73
USP9X-206ENST00000467173 MAP4K5Q9Y4K4 846 aa10.5□□□□□ -0.73
USP9X-206ENST00000467173 NR3C2P08235 984 aa10.49□□□□□ -0.73
USP9X-206ENST00000467173 CLK2P49760 499 aaKnown RBP10.49□□□□□ -0.73
USP9X-206ENST00000467173 SH3RF1Q7Z6J0 888 aa10.49□□□□□ -0.73
USP9X-206ENST00000467173 GPKOWQ92917 476 aaPredicted RBP eCLIP10.49□□□□□ -0.73
USP9X-206ENST00000467173 MAN1A2O60476 641 aa10.48□□□□□ -0.73
USP9X-206ENST00000467173 TRMT44Q8IYL2 757 aaKnown RBP10.48□□□□□ -0.73
USP9X-206ENST00000467173 ERBB4Q15303 1308 aa10.48□□□□□ -0.73
USP9X-206ENST00000467173 VASH1Q7L8A9 365 aaPredicted RBP10.46□□□□□ -0.73
USP9X-206ENST00000467173 SH3BP5LQ7L8J4 393 aa10.46□□□□□ -0.73
USP9X-206ENST00000467173 SLC24A3Q9HC58 644 aa10.46□□□□□ -0.73
USP9X-206ENST00000467173 VSIG8P0DPA2 414 aa10.45□□□□□ -0.74
USP9X-206ENST00000467173 BMP2P12643 396 aa10.45□□□□□ -0.74
USP9X-206ENST00000467173 FSHRP23945 695 aa10.45□□□□□ -0.74
USP9X-206ENST00000467173 RTL5Q5HYW3 569 aaPredicted RBP10.45□□□□□ -0.74
USP9X-206ENST00000467173 C6orf118Q5T5N4 469 aa10.45□□□□□ -0.74
USP9X-206ENST00000467173 MEIOBQ8N635 442 aa10.45□□□□□ -0.74
USP9X-206ENST00000467173 EMILIN1Q9Y6C2 1016 aa10.45□□□□□ -0.74
USP9X-206ENST00000467173 MAGEB6P1A0A0J9YX57 407 aa10.44□□□□□ -0.74
USP9X-206ENST00000467173 LINC00528Q8N1L1 170 aa10.44□□□□□ -0.74
USP9X-206ENST00000467173 SOBPA7XYQ1 873 aa10.43□□□□□ -0.74
USP9X-206ENST00000467173 TSEN34Q9BSV6 310 aaKnown RBP10.43□□□□□ -0.74
USP9X-206ENST00000467173 LORP23490 312 aaPredicted RBP10.42□□□□□ -0.74
USP9X-206ENST00000467173 CCDC116Q8IYX3 515 aa10.42□□□□□ -0.74
USP9X-206ENST00000467173 POLR3EQ9NVU0 708 aa10.42□□□□□ -0.74
USP9X-206ENST00000467173 LOC100996750A0A140TA64 210 aa10.4□□□□□ -0.74
USP9X-206ENST00000467173 KRTAP4-6Q9BYQ5 205 aa10.4□□□□□ -0.74
USP9X-206ENST00000467173 CDV3Q9UKY7 258 aaKnown RBP10.4□□□□□ -0.74
USP9X-206ENST00000467173 PDXDC2PQ6P474 469 aa10.39□□□□□ -0.75
USP9X-206ENST00000467173 CARD14Q9BXL6 1004 aa10.39□□□□□ -0.75
USP9X-206ENST00000467173 SOS2Q07890 1332 aaPredicted RBP10.38□□□□□ -0.75
USP9X-206ENST00000467173 ERFEQ4G0M1 354 aa10.38□□□□□ -0.75
USP9X-206ENST00000467173 PGPEP1Q9NXJ5 209 aa10.38□□□□□ -0.75
USP9X-206ENST00000467173 ZC3H4Q9UPT8 1303 aaKnown RBP10.37□□□□□ -0.75
USP9X-206ENST00000467173 PPFIA3O75145 1194 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms