RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 ZNF772Q68DY9 489 aaPredicted RBP9.49□□□□□ -0.89
UBXN4-205ENST00000467065 LHX8Q68G74 356 aa9.49□□□□□ -0.89
UBXN4-205ENST00000467065 CHADLQ6NUI6 762 aa9.49□□□□□ -0.89
UBXN4-205ENST00000467065 SIRT1Q96EB6 747 aa9.49□□□□□ -0.89
UBXN4-205ENST00000467065 POGKQ9P215 609 aa9.49□□□□□ -0.89
UBXN4-205ENST00000467065 TRAK1Q9UPV9 953 aa9.49□□□□□ -0.89
UBXN4-205ENST00000467065 TULP4Q9NRJ4 1543 aa9.49□□□□□ -0.89
UBXN4-205ENST00000467065 TRPM1Q7Z4N2 1603 aa9.49□□□□□ -0.89
UBXN4-205ENST00000467065 ALS2Q96Q42 1657 aa9.48□□□□□ -0.89
UBXN4-205ENST00000467065 CRYBG1Q9Y4K1 1723 aa9.48□□□□□ -0.89
UBXN4-205ENST00000467065 MINK1Q8N4C8 1332 aaPredicted RBP9.48□□□□□ -0.89
UBXN4-205ENST00000467065 ANKARQ7Z5J8 1434 aa9.48□□□□□ -0.89
UBXN4-205ENST00000467065 HIRIP3Q9BW71 556 aaPredicted RBP9.47□□□□□ -0.89
UBXN4-205ENST00000467065 NEUROD1Q13562 356 aa9.46□□□□□ -0.9
UBXN4-205ENST00000467065 PHF8Q9UPP1 1060 aa9.46□□□□□ -0.9
UBXN4-205ENST00000467065 RGS12O14924 1447 aa9.46□□□□□ -0.9
UBXN4-205ENST00000467065 TNS3Q68CZ2 1445 aa9.46□□□□□ -0.9
UBXN4-205ENST00000467065 CDK12Q9NYV4 1490 aaPredicted RBP9.46□□□□□ -0.9
UBXN4-205ENST00000467065 NWD2Q9ULI1 1742 aa9.45□□□□□ -0.9
UBXN4-205ENST00000467065 BRWD3Q6RI45 1802 aa9.45□□□□□ -0.9
UBXN4-205ENST00000467065 NGLY1Q96IV0 654 aa9.45□□□□□ -0.9
UBXN4-205ENST00000467065 STAC3Q96MF2 364 aa9.45□□□□□ -0.9
UBXN4-205ENST00000467065 PRR36Q9H6K5 1346 aa9.45□□□□□ -0.9
UBXN4-205ENST00000467065 ATP7BP35670 1465 aa9.45□□□□□ -0.9
UBXN4-205ENST00000467065 PLEKHG5O94827 1062 aa9.44□□□□□ -0.9
UBXN4-205ENST00000467065 RXRBP28702 533 aa9.44□□□□□ -0.9
UBXN4-205ENST00000467065 ZEB1P37275 1124 aaPredicted RBP9.44□□□□□ -0.9
UBXN4-205ENST00000467065 KRT28Q7Z3Y7 464 aa9.44□□□□□ -0.9
UBXN4-205ENST00000467065 PMFBP1Q8TBY8 1022 aa9.44□□□□□ -0.9
UBXN4-205ENST00000467065 SPATA31A3Q5VYP0 1347 aa9.44□□□□□ -0.9
UBXN4-205ENST00000467065 EIF3AQ14152 1382 aaKnown RBP9.44□□□□□ -0.9
UBXN4-205ENST00000467065 PHRF1Q9P1Y6 1649 aaKnown RBP9.44□□□□□ -0.9
UBXN4-205ENST00000467065 NRAPQ86VF7 1730 aa9.44□□□□□ -0.9
UBXN4-205ENST00000467065 CLSPNQ9HAW4 1339 aa9.43□□□□□ -0.9
UBXN4-205ENST00000467065 PRR29P0C7W0 189 aa9.43□□□□□ -0.9
UBXN4-205ENST00000467065 QTRT2Q9H974 415 aaKnown RBP9.43□□□□□ -0.9
UBXN4-205ENST00000467065 USP21Q9UK80 565 aa9.43□□□□□ -0.9
UBXN4-205ENST00000467065 EP400Q96L91 3159 aa9.43□□□□□ -0.9
UBXN4-205ENST00000467065 GLI3P10071 1580 aa9.42□□□□□ -0.9
UBXN4-205ENST00000467065 ATRNO75882 1429 aa9.42□□□□□ -0.9
UBXN4-205ENST00000467065 SBNO1A3KN83 1393 aa9.42□□□□□ -0.9
UBXN4-205ENST00000467065 WASLO00401 505 aaPredicted RBP9.42□□□□□ -0.9
UBXN4-205ENST00000467065 NBPF1Q3BBV0 1214 aa9.42□□□□□ -0.9
UBXN4-205ENST00000467065 SIN3AQ96ST3 1273 aa9.42□□□□□ -0.9
UBXN4-205ENST00000467065 BCL9LQ86UU0 1499 aa9.41□□□□□ -0.9
UBXN4-205ENST00000467065 RBM6P78332 1123 aaKnown RBP9.41□□□□□ -0.9
UBXN4-205ENST00000467065 PSME1Q06323 249 aa9.41□□□□□ -0.9
UBXN4-205ENST00000467065 LMOD2Q6P5Q4 547 aa9.41□□□□□ -0.9
UBXN4-205ENST00000467065 CABLES1Q8TDN4 633 aa9.41□□□□□ -0.9
UBXN4-205ENST00000467065 COL14A1Q05707 1796 aaKnown RBP9.41□□□□□ -0.9
UBXN4-205ENST00000467065 SLIT2O94813 1529 aa9.41□□□□□ -0.9
UBXN4-205ENST00000467065 ARHGEF10O15013 1369 aa9.4□□□□□ -0.9
UBXN4-205ENST00000467065 HAP1P54257 671 aaPredicted RBP9.4□□□□□ -0.9
UBXN4-205ENST00000467065 FNBP4Q8N3X1 1017 aaPredicted RBP9.4□□□□□ -0.9
UBXN4-205ENST00000467065 L3MBTL2Q969R5 705 aa9.4□□□□□ -0.9
UBXN4-205ENST00000467065 AKAP12Q02952 1782 aa9.4□□□□□ -0.91
UBXN4-205ENST00000467065 GPRASP1Q5JY77 1395 aa9.39□□□□□ -0.91
UBXN4-205ENST00000467065 POTEIP0CG38 1075 aa9.39□□□□□ -0.91
UBXN4-205ENST00000467065 TRPC5Q9UL62 973 aaPredicted RBP9.39□□□□□ -0.91
UBXN4-205ENST00000467065 TIMELESSQ9UNS1 1208 aa9.39□□□□□ -0.91
UBXN4-205ENST00000467065 NGDNQ8NEJ9 315 aaKnown RBP9.38□□□□□ -0.91
UBXN4-205ENST00000467065 UPF1Q92900 1129 aaKnown RBP eCLIP9.38□□□□□ -0.91
UBXN4-205ENST00000467065 NUDT16Q96DE0 195 aaKnown RBP9.38□□□□□ -0.91
UBXN4-205ENST00000467065 CDK19Q9BWU1 502 aa9.38□□□□□ -0.91
UBXN4-205ENST00000467065 TONSLQ96HA7 1378 aa9.37□□□□□ -0.91
UBXN4-205ENST00000467065 NRKQ7Z2Y5 1582 aa9.37□□□□□ -0.91
UBXN4-205ENST00000467065 CENPJQ9HC77 1338 aaPredicted RBP9.37□□□□□ -0.91
UBXN4-205ENST00000467065 RALGAPBQ86X10 1494 aa9.37□□□□□ -0.91
UBXN4-205ENST00000467065 PAK3O75914 559 aaPredicted RBP9.36□□□□□ -0.91
UBXN4-205ENST00000467065 POLR3AO14802 1390 aaPredicted RBP9.36□□□□□ -0.91
UBXN4-205ENST00000467065 ROCK2O75116 1388 aaKnown RBP9.36□□□□□ -0.91
UBXN4-205ENST00000467065 PIK3C2AO00443 1686 aa9.36□□□□□ -0.91
UBXN4-205ENST00000467065 CD44P16070 742 aaKnown RBP9.35□□□□□ -0.91
UBXN4-205ENST00000467065 PPIP5K1Q6PFW1 1433 aa9.35□□□□□ -0.91
UBXN4-205ENST00000467065 UNC5CLQ8IV45 518 aa9.35□□□□□ -0.91
UBXN4-205ENST00000467065 ACEP12821 1306 aa9.34□□□□□ -0.91
UBXN4-205ENST00000467065 MON2Q7Z3U7 1717 aa9.34□□□□□ -0.91
UBXN4-205ENST00000467065 SRPK2P78362 688 aaKnown RBP9.34□□□□□ -0.91
UBXN4-205ENST00000467065 GJD4Q96KN9 370 aaPredicted RBP9.34□□□□□ -0.91
UBXN4-205ENST00000467065 CABP2Q9NPB3 220 aa9.34□□□□□ -0.91
UBXN4-205ENST00000467065 FARP1Q9Y4F1 1045 aaPredicted RBP9.34□□□□□ -0.91
UBXN4-205ENST00000467065 RGPD5Q99666 1765 aa9.34□□□□□ -0.91
UBXN4-205ENST00000467065 ATAD2Q6PL18 1390 aa9.34□□□□□ -0.91
UBXN4-205ENST00000467065 LMO7Q8WWI1 1683 aa9.33□□□□□ -0.92
UBXN4-205ENST00000467065 FAM83GA6ND36 823 aa9.33□□□□□ -0.92
UBXN4-205ENST00000467065 NBPF8Q3BBV2 869 aa9.33□□□□□ -0.92
UBXN4-205ENST00000467065 NUTM2GQ5VZR2 741 aa9.33□□□□□ -0.92
UBXN4-205ENST00000467065 CCDC9Q9Y3X0 531 aaKnown RBP9.33□□□□□ -0.92
UBXN4-205ENST00000467065 CCDC61Q9Y6R9 512 aa9.33□□□□□ -0.92
UBXN4-205ENST00000467065 THSD7AQ9UPZ6 1657 aa9.32□□□□□ -0.92
UBXN4-205ENST00000467065 WNK3Q9BYP7 1800 aa9.32□□□□□ -0.92
UBXN4-205ENST00000467065 PLEKHG3A1L390 1219 aa9.31□□□□□ -0.92
UBXN4-205ENST00000467065 VPS72Q15906 364 aa9.31□□□□□ -0.92
UBXN4-205ENST00000467065 BTG4Q9NY30 223 aa9.31□□□□□ -0.92
UBXN4-205ENST00000467065 KIAA0232Q92628 1395 aa9.31□□□□□ -0.92
UBXN4-205ENST00000467065 CLCN6P51797 869 aa9.3□□□□□ -0.92
UBXN4-205ENST00000467065 PRDM11Q9NQV5 511 aa9.3□□□□□ -0.92
UBXN4-205ENST00000467065 RGPD1P0DJD0 1748 aa9.3□□□□□ -0.92
UBXN4-205ENST00000467065 USP6P35125 1406 aa9.3□□□□□ -0.92
UBXN4-205ENST00000467065 EVC2Q86UK5 1308 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms