RNA–Protein interactions for RNA: ENST00000466939.1

LAMP3-202, Transcript of lysosomal associated membrane protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LAMP3, Length 1,453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-202ENST00000466939 CCDC146Q8IYE0 955 aa16.15■□□□□ 0.18
LAMP3-202ENST00000466939 ACEP12821 1306 aa16.15■□□□□ 0.18
LAMP3-202ENST00000466939 FMN2Q9NZ56 1722 aa16.13■□□□□ 0.17
LAMP3-202ENST00000466939 NALCNQ8IZF0 1738 aa16.13■□□□□ 0.17
LAMP3-202ENST00000466939 NWD1Q149M9 1564 aa16.12■□□□□ 0.17
LAMP3-202ENST00000466939 NRKQ7Z2Y5 1582 aa16.12■□□□□ 0.17
LAMP3-202ENST00000466939 COG3Q96JB2 828 aa16.12■□□□□ 0.17
LAMP3-202ENST00000466939 USP6P35125 1406 aa16.12■□□□□ 0.17
LAMP3-202ENST00000466939 C14orf37Q86TY3 774 aa16.1■□□□□ 0.17
LAMP3-202ENST00000466939 NGDNQ8NEJ9 315 aaKnown RBP16.1■□□□□ 0.17
LAMP3-202ENST00000466939 PMFBP1Q8TBY8 1022 aa16.1■□□□□ 0.17
LAMP3-202ENST00000466939 TTC21BQ7Z4L5 1316 aa16.1■□□□□ 0.17
LAMP3-202ENST00000466939 ADGRL3Q9HAR2 1447 aa16.1■□□□□ 0.17
LAMP3-202ENST00000466939 ZRANB1Q9UGI0 708 aa16.1■□□□□ 0.17
LAMP3-202ENST00000466939 COL3A1P02461 1466 aaPredicted RBP16.09■□□□□ 0.17
LAMP3-202ENST00000466939 RBM33Q96EV2 1170 aaKnown RBP16.09■□□□□ 0.17
LAMP3-202ENST00000466939 APAF1O14727 1248 aa16.08■□□□□ 0.16
LAMP3-202ENST00000466939 U2AF1L5P0DN76 240 aaPredicted RBP16.08■□□□□ 0.16
LAMP3-202ENST00000466939 U2AF1Q01081 240 aaKnown RBP eCLIP16.08■□□□□ 0.16
LAMP3-202ENST00000466939 RUNDC1Q96C34 613 aa16.08■□□□□ 0.16
LAMP3-202ENST00000466939 RGPD8O14715 1765 aaPredicted RBP16.08■□□□□ 0.16
LAMP3-202ENST00000466939 KDM4FA0A1W2PPD8 638 aa16.07■□□□□ 0.16
LAMP3-202ENST00000466939 U2SURPO15042 1029 aaKnown RBP16.07■□□□□ 0.16
LAMP3-202ENST00000466939 PPM1GO15355 546 aaPredicted RBP16.07■□□□□ 0.16
LAMP3-202ENST00000466939 AATKQ6ZMQ8 1374 aa16.06■□□□□ 0.16
LAMP3-202ENST00000466939 TTC21AQ8NDW8 1320 aa16.06■□□□□ 0.16
LAMP3-202ENST00000466939 DIAPH1O60610 1272 aaKnown RBP16.06■□□□□ 0.16
LAMP3-202ENST00000466939 NGEFQ8N5V2 710 aa16.06■□□□□ 0.16
LAMP3-202ENST00000466939 POLKQ9UBT6 870 aa16.06■□□□□ 0.16
LAMP3-202ENST00000466939 HSPA2P54652 639 aa16.05■□□□□ 0.16
LAMP3-202ENST00000466939 PROSER2Q86WR7 435 aaPredicted RBP16.05■□□□□ 0.16
LAMP3-202ENST00000466939 CDCA7LQ96GN5 454 aa16.05■□□□□ 0.16
LAMP3-202ENST00000466939 SSH2Q76I76 1423 aa16.05■□□□□ 0.16
LAMP3-202ENST00000466939 CDK12Q9NYV4 1490 aaPredicted RBP16.04■□□□□ 0.16
LAMP3-202ENST00000466939 OVOS2A0A0J9YW53 1432 aa16.04■□□□□ 0.16
LAMP3-202ENST00000466939 OVOS2Q6IE36 1432 aa16.04■□□□□ 0.16
LAMP3-202ENST00000466939 PNPLA6Q8IY17 1366 aa16.04■□□□□ 0.16
LAMP3-202ENST00000466939 IQSEC2Q5JU85 1478 aa16.03■□□□□ 0.16
LAMP3-202ENST00000466939 FBLN1P23142 703 aa16.03■□□□□ 0.16
LAMP3-202ENST00000466939 IRX6P78412 446 aaPredicted RBP16.03■□□□□ 0.16
LAMP3-202ENST00000466939 EMILIN1Q9Y6C2 1016 aa16.03■□□□□ 0.16
LAMP3-202ENST00000466939 ZNF521Q96K83 1311 aa16.03■□□□□ 0.16
LAMP3-202ENST00000466939 GOLGA2Q08379 1002 aa16.03■□□□□ 0.16
LAMP3-202ENST00000466939 PHF8Q9UPP1 1060 aa16.03■□□□□ 0.16
LAMP3-202ENST00000466939 MAP2P11137 1827 aaKnown RBP16.02■□□□□ 0.15
LAMP3-202ENST00000466939 LMTK3Q96Q04 1460 aa16.01■□□□□ 0.15
LAMP3-202ENST00000466939 MAPK8IP3Q9UPT6 1336 aa16■□□□□ 0.15
LAMP3-202ENST00000466939 RRS1Q15050 365 aaKnown RBP16■□□□□ 0.15
LAMP3-202ENST00000466939 TCP11L2Q8N4U5 519 aa16■□□□□ 0.15
LAMP3-202ENST00000466939 RCAN3Q9UKA8 241 aa16■□□□□ 0.15
LAMP3-202ENST00000466939 RRP7AQ9Y3A4 280 aaKnown RBP16■□□□□ 0.15
LAMP3-202ENST00000466939 ESCO1Q5FWF5 840 aa15.99■□□□□ 0.15
LAMP3-202ENST00000466939 PNNQ9H307 717 aaKnown RBP15.99■□□□□ 0.15
LAMP3-202ENST00000466939 USP31Q70CQ4 1352 aa15.99■□□□□ 0.15
LAMP3-202ENST00000466939 NEUROD2Q15784 382 aa15.98■□□□□ 0.15
LAMP3-202ENST00000466939 PIK3C2AO00443 1686 aa15.98■□□□□ 0.15
LAMP3-202ENST00000466939 SOX12O15370 315 aa15.97■□□□□ 0.15
LAMP3-202ENST00000466939 PAK3O75914 559 aaPredicted RBP15.97■□□□□ 0.15
LAMP3-202ENST00000466939 SLFN5Q08AF3 891 aa15.97■□□□□ 0.15
LAMP3-202ENST00000466939 ERICH6BQ5W0A0 696 aa15.97■□□□□ 0.15
LAMP3-202ENST00000466939 RNF123Q5XPI4 1314 aa15.96■□□□□ 0.15
LAMP3-202ENST00000466939 TMEM94Q12767 1356 aa15.96■□□□□ 0.15
LAMP3-202ENST00000466939 LRRC7Q96NW7 1537 aa15.96■□□□□ 0.15
LAMP3-202ENST00000466939 E9PSI1 815 aa15.96■□□□□ 0.14
LAMP3-202ENST00000466939 NEFMP07197 916 aa15.96■□□□□ 0.14
LAMP3-202ENST00000466939 NLRP6P59044 892 aa15.96■□□□□ 0.14
LAMP3-202ENST00000466939 DUSP27Q5VZP5 1158 aa15.96■□□□□ 0.14
LAMP3-202ENST00000466939 WWC1Q8IX03 1113 aa15.96■□□□□ 0.14
LAMP3-202ENST00000466939 IL13P35225 146 aa15.95■□□□□ 0.14
LAMP3-202ENST00000466939 PSME1Q06323 249 aa15.95■□□□□ 0.14
LAMP3-202ENST00000466939 PLEKHF1Q96S99 279 aa15.95■□□□□ 0.14
LAMP3-202ENST00000466939 C19orf44Q9H6X5 657 aa15.95■□□□□ 0.14
LAMP3-202ENST00000466939 STRCP1A6NGW2 1772 aa15.95■□□□□ 0.14
LAMP3-202ENST00000466939 FCHSD2O94868 740 aa15.94■□□□□ 0.14
LAMP3-202ENST00000466939 RRP1P56182 461 aaKnown RBP15.94■□□□□ 0.14
LAMP3-202ENST00000466939 CCDC27Q2M243 656 aa15.94■□□□□ 0.14
LAMP3-202ENST00000466939 NCBP3Q53F19 620 aaKnown RBP15.94■□□□□ 0.14
LAMP3-202ENST00000466939 ABTB2Q8N961 1025 aa15.94■□□□□ 0.14
LAMP3-202ENST00000466939 NCOA3Q9Y6Q9 1424 aa15.93■□□□□ 0.14
LAMP3-202ENST00000466939 ATF3P18847 181 aa15.93■□□□□ 0.14
LAMP3-202ENST00000466939 NUTM2GQ5VZR2 741 aa15.93■□□□□ 0.14
LAMP3-202ENST00000466939 C1orf167Q5SNV9 1468 aa15.93■□□□□ 0.14
LAMP3-202ENST00000466939 USP54Q70EL1 1684 aa15.93■□□□□ 0.14
LAMP3-202ENST00000466939 KIF1AQ12756 1690 aa15.92■□□□□ 0.14
LAMP3-202ENST00000466939 PRKAR2BP31323 418 aa15.92■□□□□ 0.14
LAMP3-202ENST00000466939 ORAI2Q96SN7 254 aa15.92■□□□□ 0.14
LAMP3-202ENST00000466939 RSPH6AQ9H0K4 717 aa15.92■□□□□ 0.14
LAMP3-202ENST00000466939 STRCQ7RTU9 1775 aa15.92■□□□□ 0.14
LAMP3-202ENST00000466939 DCCP43146 1447 aa15.92■□□□□ 0.14
LAMP3-202ENST00000466939 PEAK1Q9H792 1746 aa15.92■□□□□ 0.14
LAMP3-202ENST00000466939 HMOX1P09601 288 aa15.91■□□□□ 0.14
LAMP3-202ENST00000466939 TMPOP42166 694 aaKnown RBP15.91■□□□□ 0.14
LAMP3-202ENST00000466939 WDR63Q8IWG1 891 aa15.91■□□□□ 0.14
LAMP3-202ENST00000466939 SPINK5Q9NQ38 1064 aaPredicted RBP15.91■□□□□ 0.14
LAMP3-202ENST00000466939 DMRT2Q9Y5R5 561 aa15.91■□□□□ 0.14
LAMP3-202ENST00000466939 MAP3K19Q56UN5 1328 aa15.91■□□□□ 0.14
LAMP3-202ENST00000466939 SBNO1A3KN83 1393 aa15.91■□□□□ 0.14
LAMP3-202ENST00000466939 AMPHP49418 695 aa15.91■□□□□ 0.14
LAMP3-202ENST00000466939 TRMT2AQ8IZ69 625 aaKnown RBP15.91■□□□□ 0.14
LAMP3-202ENST00000466939 PELP1Q8IZL8 1130 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms