RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 FAM83GA6ND36 823 aa10.24□□□□□ -0.77
CLDN4-204ENST00000466411 TRIM37O94972 964 aa10.24□□□□□ -0.77
CLDN4-204ENST00000466411 CHGAP10645 457 aaKnown RBP10.24□□□□□ -0.77
CLDN4-204ENST00000466411 PTGER2P43116 358 aa10.24□□□□□ -0.77
CLDN4-204ENST00000466411 VASPP50552 380 aaPredicted RBP10.24□□□□□ -0.77
CLDN4-204ENST00000466411 NUP155O75694 1391 aa10.24□□□□□ -0.77
CLDN4-204ENST00000466411 CASZ1Q86V15 1759 aa10.24□□□□□ -0.77
CLDN4-204ENST00000466411 PRAG1Q86YV5 1406 aa10.24□□□□□ -0.77
CLDN4-204ENST00000466411 NRKQ7Z2Y5 1582 aa10.23□□□□□ -0.77
CLDN4-204ENST00000466411 APBA3O96018 575 aa10.23□□□□□ -0.77
CLDN4-204ENST00000466411 ESCO1Q5FWF5 840 aa10.23□□□□□ -0.77
CLDN4-204ENST00000466411 SYT17Q9BSW7 474 aa10.23□□□□□ -0.77
CLDN4-204ENST00000466411 ADGRB2O60241 1585 aa10.22□□□□□ -0.77
CLDN4-204ENST00000466411 E9PCH4 1651 aa10.22□□□□□ -0.77
CLDN4-204ENST00000466411 NBPF8Q3BBV2 869 aa10.22□□□□□ -0.77
CLDN4-204ENST00000466411 NBPF14Q5TI25 921 aa10.22□□□□□ -0.77
CLDN4-204ENST00000466411 PDGFDQ9GZP0 370 aaPredicted RBP10.22□□□□□ -0.77
CLDN4-204ENST00000466411 CCDC9Q9Y3X0 531 aaKnown RBP10.22□□□□□ -0.77
CLDN4-204ENST00000466411 MYOM1P52179 1685 aa10.22□□□□□ -0.77
CLDN4-204ENST00000466411 CABLES1Q8TDN4 633 aa10.21□□□□□ -0.77
CLDN4-204ENST00000466411 RAB3GAP2Q9H2M9 1393 aa10.21□□□□□ -0.78
CLDN4-204ENST00000466411 SHANK3Q9BYB0 1731 aa10.21□□□□□ -0.78
CLDN4-204ENST00000466411 FAM196AQ6ZSG2 479 aa10.2□□□□□ -0.78
CLDN4-204ENST00000466411 ABCA3Q99758 1704 aa10.19□□□□□ -0.78
CLDN4-204ENST00000466411 SPATA31A5Q5VU36 1347 aa10.19□□□□□ -0.78
CLDN4-204ENST00000466411 SPATA31A7Q8IWB4 1347 aa10.19□□□□□ -0.78
CLDN4-204ENST00000466411 A0A0G2JS52 829 aa10.19□□□□□ -0.78
CLDN4-204ENST00000466411 MYT1Q01538 1121 aa10.19□□□□□ -0.78
CLDN4-204ENST00000466411 SGIP1Q9BQI5 828 aa10.19□□□□□ -0.78
CLDN4-204ENST00000466411 FHDC1Q9C0D6 1143 aaPredicted RBP10.19□□□□□ -0.78
CLDN4-204ENST00000466411 GOLGB1Q14789 3259 aaKnown RBP10.19□□□□□ -0.78
CLDN4-204ENST00000466411 LRPPRCP42704 1394 aaKnown RBP10.18□□□□□ -0.78
CLDN4-204ENST00000466411 CDC42BPGQ6DT37 1551 aa10.18□□□□□ -0.78
CLDN4-204ENST00000466411 HSPA6P17066 643 aa10.17□□□□□ -0.78
CLDN4-204ENST00000466411 ANO8Q9HCE9 1232 aaPredicted RBP10.17□□□□□ -0.78
CLDN4-204ENST00000466411 KIF1BO60333 1816 aa10.17□□□□□ -0.78
CLDN4-204ENST00000466411 KRT28Q7Z3Y7 464 aa10.16□□□□□ -0.78
CLDN4-204ENST00000466411 NEXMIFQ5QGS0 1516 aa10.16□□□□□ -0.78
CLDN4-204ENST00000466411 BTG4Q9NY30 223 aa10.15□□□□□ -0.78
CLDN4-204ENST00000466411 CCDC144AA2RUR9 1427 aa10.14□□□□□ -0.79
CLDN4-204ENST00000466411 TNS3Q68CZ2 1445 aa10.14□□□□□ -0.79
CLDN4-204ENST00000466411 ZBTB7AO95365 584 aa10.13□□□□□ -0.79
CLDN4-204ENST00000466411 PRELPP51888 382 aa10.13□□□□□ -0.79
CLDN4-204ENST00000466411 COL13A1Q5TAT6 717 aaPredicted RBP10.13□□□□□ -0.79
CLDN4-204ENST00000466411 DNAJC5GQ8N7S2 189 aa10.13□□□□□ -0.79
CLDN4-204ENST00000466411 MAP3K5Q99683 1374 aa10.13□□□□□ -0.79
CLDN4-204ENST00000466411 IFNLR1Q8IU57 520 aaPredicted RBP10.12□□□□□ -0.79
CLDN4-204ENST00000466411 MPHOSPH9Q99550 1183 aa10.12□□□□□ -0.79
CLDN4-204ENST00000466411 DLC1Q96QB1 1528 aa10.12□□□□□ -0.79
CLDN4-204ENST00000466411 COL14A1Q05707 1796 aaKnown RBP10.11□□□□□ -0.79
CLDN4-204ENST00000466411 SPATA31A1Q5TZJ5 1347 aa10.11□□□□□ -0.79
CLDN4-204ENST00000466411 NUTM2FA1L443 756 aa10.11□□□□□ -0.79
CLDN4-204ENST00000466411 PCDH10Q9P2E7 1040 aa10.11□□□□□ -0.79
CLDN4-204ENST00000466411 SBNO1A3KN83 1393 aa10.11□□□□□ -0.79
CLDN4-204ENST00000466411 RGPD3A6NKT7 1758 aaPredicted RBP10.11□□□□□ -0.79
CLDN4-204ENST00000466411 RGPD4Q7Z3J3 1758 aa10.11□□□□□ -0.79
CLDN4-204ENST00000466411 PLSCR1O15162 318 aa10.1□□□□□ -0.79
CLDN4-204ENST00000466411 HAP1P54257 671 aaPredicted RBP10.1□□□□□ -0.79
CLDN4-204ENST00000466411 CLTCL1P53675 1640 aa10.1□□□□□ -0.79
CLDN4-204ENST00000466411 KIF1AQ12756 1690 aa10.09□□□□□ -0.79
CLDN4-204ENST00000466411 RGPD8O14715 1765 aaPredicted RBP10.09□□□□□ -0.79
CLDN4-204ENST00000466411 FMN2Q9NZ56 1722 aa10.08□□□□□ -0.8
CLDN4-204ENST00000466411 ARHGEF10O15013 1369 aa10.07□□□□□ -0.8
CLDN4-204ENST00000466411 PLEKHG5O94827 1062 aa10.07□□□□□ -0.8
CLDN4-204ENST00000466411 SBF2Q86WG5 1849 aa10.07□□□□□ -0.8
CLDN4-204ENST00000466411 CLSPNQ9HAW4 1339 aa10.07□□□□□ -0.8
CLDN4-204ENST00000466411 PSME1Q06323 249 aa10.06□□□□□ -0.8
CLDN4-204ENST00000466411 GPR162Q16538 588 aa10.06□□□□□ -0.8
CLDN4-204ENST00000466411 ZNF326Q5BKZ1 582 aaKnown RBP10.06□□□□□ -0.8
CLDN4-204ENST00000466411 BARGINQ6ZT62 677 aa10.06□□□□□ -0.8
CLDN4-204ENST00000466411 STAC3Q96MF2 364 aa10.06□□□□□ -0.8
CLDN4-204ENST00000466411 MTFR1LQ9H019 292 aa10.06□□□□□ -0.8
CLDN4-204ENST00000466411 RPGRIP1LQ68CZ1 1315 aa10.06□□□□□ -0.8
CLDN4-204ENST00000466411 PEAK1Q9H792 1746 aa10.05□□□□□ -0.8
CLDN4-204ENST00000466411 CRYBG1Q9Y4K1 1723 aa10.05□□□□□ -0.8
CLDN4-204ENST00000466411 PTF1AQ7RTS3 328 aa10.05□□□□□ -0.8
CLDN4-204ENST00000466411 WAPLQ7Z5K2 1190 aa10.05□□□□□ -0.8
CLDN4-204ENST00000466411 ARXQ96QS3 562 aa10.05□□□□□ -0.8
CLDN4-204ENST00000466411 PCNTO95613 3336 aa10.05□□□□□ -0.8
CLDN4-204ENST00000466411 IFT172Q9UG01 1749 aa10.04□□□□□ -0.8
CLDN4-204ENST00000466411 NRXN1Q9ULB1 1477 aa10.04□□□□□ -0.8
CLDN4-204ENST00000466411 ANKRD30BQ9BXX2 1392 aa10.04□□□□□ -0.8
CLDN4-204ENST00000466411 PPLO60437 1756 aa10.04□□□□□ -0.8
CLDN4-204ENST00000466411 PHF8Q9UPP1 1060 aa10.04□□□□□ -0.8
CLDN4-204ENST00000466411 TECPR2O15040 1411 aa10.04□□□□□ -0.8
CLDN4-204ENST00000466411 TRPM3Q9HCF6 1732 aaPredicted RBP10.04□□□□□ -0.8
CLDN4-204ENST00000466411 ALS2Q96Q42 1657 aa10.03□□□□□ -0.8
CLDN4-204ENST00000466411 PDE3BQ13370 1112 aa10.03□□□□□ -0.8
CLDN4-204ENST00000466411 PCGF6Q9BYE7 350 aa10.03□□□□□ -0.8
CLDN4-204ENST00000466411 ATP10DQ9P241 1426 aa10.03□□□□□ -0.8
CLDN4-204ENST00000466411 PLEKHH1Q9ULM0 1364 aa10.02□□□□□ -0.8
CLDN4-204ENST00000466411 SLC15A2Q16348 729 aa10.02□□□□□ -0.81
CLDN4-204ENST00000466411 RBM42Q9BTD8 480 aaKnown RBP10.02□□□□□ -0.81
CLDN4-204ENST00000466411 ADCY9O60503 1353 aa10.01□□□□□ -0.81
CLDN4-204ENST00000466411 SPATA31E1Q6ZUB1 1445 aa10.01□□□□□ -0.81
CLDN4-204ENST00000466411 VGFO15240 615 aaPredicted RBP10.01□□□□□ -0.81
CLDN4-204ENST00000466411 LMOD2Q6P5Q4 547 aa10.01□□□□□ -0.81
CLDN4-204ENST00000466411 TNS4Q8IZW8 715 aa10.01□□□□□ -0.81
CLDN4-204ENST00000466411 DHX57Q6P158 1386 aaKnown RBP10.01□□□□□ -0.81
CLDN4-204ENST00000466411 COL24A1Q17RW2 1714 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms