RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 NME9Q86XW9 330 aa17.83■□□□□ 0.44
UBE4B-206ENST00000466379 ZRANB1Q9UGI0 708 aa17.83■□□□□ 0.44
UBE4B-206ENST00000466379 U2SURPO15042 1029 aaKnown RBP17.82■□□□□ 0.44
UBE4B-206ENST00000466379 TCP11L2Q8N4U5 519 aa17.82■□□□□ 0.44
UBE4B-206ENST00000466379 EXOC6Q8TAG9 804 aa17.82■□□□□ 0.44
UBE4B-206ENST00000466379 EDC4Q6P2E9 1401 aaKnown RBP17.82■□□□□ 0.44
UBE4B-206ENST00000466379 DNAJC5Q9H3Z4 198 aa17.82■□□□□ 0.44
UBE4B-206ENST00000466379 TBX22Q9Y458 520 aa17.82■□□□□ 0.44
UBE4B-206ENST00000466379 ADGRB2O60241 1585 aa17.81■□□□□ 0.44
UBE4B-206ENST00000466379 WWC1Q8IX03 1113 aa17.81■□□□□ 0.44
UBE4B-206ENST00000466379 MON2Q7Z3U7 1717 aa17.8■□□□□ 0.44
UBE4B-206ENST00000466379 ITSN1Q15811 1721 aa17.8■□□□□ 0.44
UBE4B-206ENST00000466379 TRMT2AQ8IZ69 625 aaKnown RBP17.8■□□□□ 0.44
UBE4B-206ENST00000466379 PPM1GO15355 546 aaPredicted RBP17.79■□□□□ 0.44
UBE4B-206ENST00000466379 AKAP12Q02952 1782 aa17.79■□□□□ 0.44
UBE4B-206ENST00000466379 CCDC136Q96JN2 1154 aa17.79■□□□□ 0.44
UBE4B-206ENST00000466379 E9PSI1 815 aa17.78■□□□□ 0.44
UBE4B-206ENST00000466379 ADAMTSL3P82987 1691 aa17.78■□□□□ 0.44
UBE4B-206ENST00000466379 AEBP2Q6ZN18 517 aaPredicted RBP17.77■□□□□ 0.44
UBE4B-206ENST00000466379 POLKQ9UBT6 870 aa17.77■□□□□ 0.44
UBE4B-206ENST00000466379 DIP2AQ14689 1571 aa17.77■□□□□ 0.44
UBE4B-206ENST00000466379 NGEFQ8N5V2 710 aa17.77■□□□□ 0.43
UBE4B-206ENST00000466379 TOPAZ1Q8N9V7 1692 aa17.76■□□□□ 0.43
UBE4B-206ENST00000466379 NKTRP30414 1462 aaKnown RBP17.76■□□□□ 0.43
UBE4B-206ENST00000466379 MAP2P11137 1827 aaKnown RBP17.76■□□□□ 0.43
UBE4B-206ENST00000466379 PTCH1Q13635 1447 aa17.76■□□□□ 0.43
UBE4B-206ENST00000466379 DIAPH1O60610 1272 aaKnown RBP17.75■□□□□ 0.43
UBE4B-206ENST00000466379 C20orf194Q5TEA3 1177 aa17.75■□□□□ 0.43
UBE4B-206ENST00000466379 EMILIN1Q9Y6C2 1016 aa17.75■□□□□ 0.43
UBE4B-206ENST00000466379 ACEP12821 1306 aa17.75■□□□□ 0.43
UBE4B-206ENST00000466379 PNPLA6Q8IY17 1366 aa17.75■□□□□ 0.43
UBE4B-206ENST00000466379 XRN1Q8IZH2 1706 aaKnown RBP17.74■□□□□ 0.43
UBE4B-206ENST00000466379 KCNA6P17658 529 aa17.74■□□□□ 0.43
UBE4B-206ENST00000466379 CRBNQ96SW2 442 aa17.74■□□□□ 0.43
UBE4B-206ENST00000466379 COG3Q96JB2 828 aa17.73■□□□□ 0.43
UBE4B-206ENST00000466379 PLEKHF1Q96S99 279 aa17.73■□□□□ 0.43
UBE4B-206ENST00000466379 PHF23Q9BUL5 403 aaPredicted RBP17.73■□□□□ 0.43
UBE4B-206ENST00000466379 ZNF692Q9BU19 519 aaPredicted RBP17.73■□□□□ 0.43
UBE4B-206ENST00000466379 ZNF142P52746 1687 aaPredicted RBP17.72■□□□□ 0.43
UBE4B-206ENST00000466379 PMFBP1Q8TBY8 1022 aa17.72■□□□□ 0.43
UBE4B-206ENST00000466379 NRKQ7Z2Y5 1582 aa17.71■□□□□ 0.43
UBE4B-206ENST00000466379 RRS1Q15050 365 aaKnown RBP17.71■□□□□ 0.43
UBE4B-206ENST00000466379 RGPD8O14715 1765 aaPredicted RBP17.71■□□□□ 0.43
UBE4B-206ENST00000466379 TTC21BQ7Z4L5 1316 aa17.7■□□□□ 0.42
UBE4B-206ENST00000466379 PLEKHG3A1L390 1219 aa17.7■□□□□ 0.42
UBE4B-206ENST00000466379 BCAR3O75815 825 aa17.7■□□□□ 0.42
UBE4B-206ENST00000466379 ANKLE2Q86XL3 938 aa17.7■□□□□ 0.42
UBE4B-206ENST00000466379 MAPK8IP3Q9UPT6 1336 aa17.69■□□□□ 0.42
UBE4B-206ENST00000466379 CCDC27Q2M243 656 aa17.69■□□□□ 0.42
UBE4B-206ENST00000466379 USP6P35125 1406 aa17.69■□□□□ 0.42
UBE4B-206ENST00000466379 TMPOP42166 694 aaKnown RBP17.68■□□□□ 0.42
UBE4B-206ENST00000466379 WDR63Q8IWG1 891 aa17.68■□□□□ 0.42
UBE4B-206ENST00000466379 LRRC7Q96NW7 1537 aa17.68■□□□□ 0.42
UBE4B-206ENST00000466379 RBM33Q96EV2 1170 aaKnown RBP17.67■□□□□ 0.42
UBE4B-206ENST00000466379 AATKQ6ZMQ8 1374 aa17.67■□□□□ 0.42
UBE4B-206ENST00000466379 HMOX1P09601 288 aa17.67■□□□□ 0.42
UBE4B-206ENST00000466379 CDK12Q9NYV4 1490 aaPredicted RBP17.66■□□□□ 0.42
UBE4B-206ENST00000466379 PRKAR2BP31323 418 aa17.65■□□□□ 0.42
UBE4B-206ENST00000466379 TRIM35Q9UPQ4 493 aa17.65■□□□□ 0.42
UBE4B-206ENST00000466379 RBM19Q9Y4C8 960 aaKnown RBP17.65■□□□□ 0.42
UBE4B-206ENST00000466379 PIK3R4Q99570 1358 aa17.65■□□□□ 0.42
UBE4B-206ENST00000466379 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.65■□□□□ 0.42
UBE4B-206ENST00000466379 RSPH6AQ9H0K4 717 aa17.65■□□□□ 0.42
UBE4B-206ENST00000466379 SOX12O15370 315 aa17.64■□□□□ 0.41
UBE4B-206ENST00000466379 IL13P35225 146 aa17.64■□□□□ 0.41
UBE4B-206ENST00000466379 NGDNQ8NEJ9 315 aaKnown RBP17.64■□□□□ 0.41
UBE4B-206ENST00000466379 CHD2O14647 1828 aaKnown RBP17.64■□□□□ 0.41
UBE4B-206ENST00000466379 RIPK4P57078 832 aa17.64■□□□□ 0.41
UBE4B-206ENST00000466379 OVOS2A0A0J9YW53 1432 aa17.64■□□□□ 0.41
UBE4B-206ENST00000466379 OVOS2Q6IE36 1432 aa17.64■□□□□ 0.41
UBE4B-206ENST00000466379 FCHSD2O94868 740 aa17.63■□□□□ 0.41
UBE4B-206ENST00000466379 SETD1BQ9UPS6 1966 aaKnown RBP17.63■□□□□ 0.41
UBE4B-206ENST00000466379 SSH2Q76I76 1423 aa17.63■□□□□ 0.41
UBE4B-206ENST00000466379 TSR2Q969E8 191 aaKnown RBP17.63■□□□□ 0.41
UBE4B-206ENST00000466379 NALCNQ8IZF0 1738 aa17.61■□□□□ 0.41
UBE4B-206ENST00000466379 FMN2Q9NZ56 1722 aa17.61■□□□□ 0.41
UBE4B-206ENST00000466379 PHACTR3Q96KR7 559 aa17.61■□□□□ 0.41
UBE4B-206ENST00000466379 PNNQ9H307 717 aaKnown RBP17.61■□□□□ 0.41
UBE4B-206ENST00000466379 MYH16Q9H6N6 1097 aa17.61■□□□□ 0.41
UBE4B-206ENST00000466379 RARSP54136 660 aaKnown RBP17.59■□□□□ 0.41
UBE4B-206ENST00000466379 BCL2L13Q9BXK5 485 aa17.59■□□□□ 0.41
UBE4B-206ENST00000466379 FANCIQ9NVI1 1328 aa17.59■□□□□ 0.41
UBE4B-206ENST00000466379 NPHP4O75161 1426 aaPredicted RBP17.59■□□□□ 0.41
UBE4B-206ENST00000466379 PEAK1Q9H792 1746 aa17.58■□□□□ 0.41
UBE4B-206ENST00000466379 FRAT1Q92837 279 aaPredicted RBP17.58■□□□□ 0.4
UBE4B-206ENST00000466379 ANKARQ7Z5J8 1434 aa17.58■□□□□ 0.4
UBE4B-206ENST00000466379 CANXP27824 592 aaKnown RBP17.58■□□□□ 0.4
UBE4B-206ENST00000466379 TTC21AQ8NDW8 1320 aa17.57■□□□□ 0.4
UBE4B-206ENST00000466379 NEFMP07197 916 aa17.57■□□□□ 0.4
UBE4B-206ENST00000466379 USP31Q70CQ4 1352 aa17.57■□□□□ 0.4
UBE4B-206ENST00000466379 EIF4A2Q14240 407 aaKnown RBP17.56■□□□□ 0.4
UBE4B-206ENST00000466379 PIK3C2AO00443 1686 aa17.56■□□□□ 0.4
UBE4B-206ENST00000466379 PRKCSHP14314 528 aaPredicted RBP17.56■□□□□ 0.4
UBE4B-206ENST00000466379 EXOSC9Q06265 439 aaKnown RBP17.56■□□□□ 0.4
UBE4B-206ENST00000466379 NUTM2GQ5VZR2 741 aa17.56■□□□□ 0.4
UBE4B-206ENST00000466379 HSP90AB2PQ58FF8 381 aa17.55■□□□□ 0.4
UBE4B-206ENST00000466379 NFE2L2Q16236 605 aa17.55■□□□□ 0.4
UBE4B-206ENST00000466379 AEBP1Q8IUX7 1158 aa17.55■□□□□ 0.4
UBE4B-206ENST00000466379 PANK1Q8TE04 598 aa17.55■□□□□ 0.4
UBE4B-206ENST00000466379 THUMPD2Q9BTF0 503 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms