RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 EVA1BQ9NVM1 165 aa6.14□□□□□ -1.43
CCDC93-205ENST00000466171 GJA5P36382 358 aa6.13□□□□□ -1.43
CCDC93-205ENST00000466171 KCNH2Q12809 1159 aa6.13□□□□□ -1.43
CCDC93-205ENST00000466171 DESI1Q6ICB0 168 aa6.13□□□□□ -1.43
CCDC93-205ENST00000466171 BEGAINQ9BUH8 593 aa6.13□□□□□ -1.43
CCDC93-205ENST00000466171 UNC93B1Q9H1C4 597 aa6.13□□□□□ -1.43
CCDC93-205ENST00000466171 CAPN5O15484 640 aaPredicted RBP6.12□□□□□ -1.43
CCDC93-205ENST00000466171 SIAH2O43255 324 aa6.12□□□□□ -1.43
CCDC93-205ENST00000466171 BMP1P13497 986 aa6.12□□□□□ -1.43
CCDC93-205ENST00000466171 SH3BP2P78314 561 aa6.12□□□□□ -1.43
CCDC93-205ENST00000466171 ZC3H15Q8WU90 426 aaKnown RBP6.12□□□□□ -1.43
CCDC93-205ENST00000466171 VARSP26640 1264 aaKnown RBP6.11□□□□□ -1.43
CCDC93-205ENST00000466171 CTHP32929 405 aa6.11□□□□□ -1.43
CCDC93-205ENST00000466171 LINC01559Q495D7 138 aa6.11□□□□□ -1.43
CCDC93-205ENST00000466171 BAP1Q92560 729 aa6.11□□□□□ -1.43
CCDC93-205ENST00000466171 TRIM46Q7Z4K8 759 aa6.1□□□□□ -1.43
CCDC93-205ENST00000466171 ZNF511Q8NB15 262 aa6.1□□□□□ -1.43
CCDC93-205ENST00000466171 TBC1D2Q9BYX2 928 aa6.1□□□□□ -1.43
CCDC93-205ENST00000466171 RSBN1LQ6PCB5 846 aaPredicted RBP6.09□□□□□ -1.43
CCDC93-205ENST00000466171 AK7Q96M32 723 aa6.09□□□□□ -1.43
CCDC93-205ENST00000466171 ZBTB3Q9H5J0 574 aa6.09□□□□□ -1.43
CCDC93-205ENST00000466171 TMEM151AQ8N4L1 468 aa6.08□□□□□ -1.44
CCDC93-205ENST00000466171 MPNDQ8N594 471 aa6.08□□□□□ -1.44
CCDC93-205ENST00000466171 FAM174AQ8TBP5 190 aa6.08□□□□□ -1.44
CCDC93-205ENST00000466171 SPTLC1O15269 473 aa6.07□□□□□ -1.44
CCDC93-205ENST00000466171 GDF11O95390 407 aa6.07□□□□□ -1.44
CCDC93-205ENST00000466171 VSIG8P0DPA2 414 aa6.07□□□□□ -1.44
CCDC93-205ENST00000466171 RASSF7Q02833 373 aa6.07□□□□□ -1.44
CCDC93-205ENST00000466171 PRPF38BQ5VTL8 546 aaKnown RBP6.07□□□□□ -1.44
CCDC93-205ENST00000466171 LYPD8Q6UX82 237 aa6.07□□□□□ -1.44
CCDC93-205ENST00000466171 PARP9Q8IXQ6 854 aa6.07□□□□□ -1.44
CCDC93-205ENST00000466171 TLL2Q9Y6L7 1015 aa6.07□□□□□ -1.44
CCDC93-205ENST00000466171 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.06□□□□□ -1.44
CCDC93-205ENST00000466171 TRIM66O15016 1216 aa6.06□□□□□ -1.44
CCDC93-205ENST00000466171 NNTQ13423 1086 aa6.06□□□□□ -1.44
CCDC93-205ENST00000466171 SCARF1Q14162 830 aa6.06□□□□□ -1.44
CCDC93-205ENST00000466171 AGERQ15109 404 aa6.06□□□□□ -1.44
CCDC93-205ENST00000466171 RIC3Q7Z5B4 369 aa6.06□□□□□ -1.44
CCDC93-205ENST00000466171 ADH1CP00326 375 aa6.05□□□□□ -1.44
CCDC93-205ENST00000466171 HRCP23327 699 aa6.05□□□□□ -1.44
CCDC93-205ENST00000466171 PCDHB15Q9Y5E8 787 aa6.05□□□□□ -1.44
CCDC93-205ENST00000466171 NUTM2BA6NNL0 878 aaPredicted RBP6.04□□□□□ -1.44
CCDC93-205ENST00000466171 NUTM2EB1AL46 878 aaPredicted RBP6.04□□□□□ -1.44
CCDC93-205ENST00000466171 WDR4P57081 412 aaKnown RBP6.04□□□□□ -1.44
CCDC93-205ENST00000466171 CSPP1Q1MSJ5 1256 aa6.04□□□□□ -1.44
CCDC93-205ENST00000466171 NUTM2DQ5VT03 806 aaPredicted RBP6.04□□□□□ -1.44
CCDC93-205ENST00000466171 NUTM2AQ8IVF1 878 aaPredicted RBP6.04□□□□□ -1.44
CCDC93-205ENST00000466171 ARMC2Q8NEN0 867 aa6.04□□□□□ -1.44
CCDC93-205ENST00000466171 TSC1Q92574 1164 aa6.04□□□□□ -1.44
CCDC93-205ENST00000466171 CFAP99D6REC4 459 aa6.03□□□□□ -1.44
CCDC93-205ENST00000466171 ARID5BQ14865 1188 aa6.03□□□□□ -1.44
CCDC93-205ENST00000466171 MRPL14Q6P1L8 145 aaKnown RBP6.03□□□□□ -1.44
CCDC93-205ENST00000466171 BPHLQ86WA6 291 aaPredicted RBP6.03□□□□□ -1.44
CCDC93-205ENST00000466171 ZFP42Q96MM3 310 aa6.03□□□□□ -1.44
CCDC93-205ENST00000466171 KRTAP9-2Q9BYQ4 174 aa6.03□□□□□ -1.44
CCDC93-205ENST00000466171 F12P00748 615 aaPredicted RBP6.02□□□□□ -1.45
CCDC93-205ENST00000466171 HELBQ8NG08 1087 aaPredicted RBP6.02□□□□□ -1.45
CCDC93-205ENST00000466171 MAP10Q9P2G4 905 aa6.02□□□□□ -1.45
CCDC93-205ENST00000466171 KRTAP9-6A0A140TA67 174 aa6.01□□□□□ -1.45
CCDC93-205ENST00000466171 UPP2O95045 317 aa6.01□□□□□ -1.45
CCDC93-205ENST00000466171 TIMP2P16035 220 aa6.01□□□□□ -1.45
CCDC93-205ENST00000466171 PDE4DQ08499 809 aa6.01□□□□□ -1.45
CCDC93-205ENST00000466171 NR5A1Q13285 461 aa6.01□□□□□ -1.45
CCDC93-205ENST00000466171 TUSC1Q2TAM9 212 aa6.01□□□□□ -1.45
CCDC93-205ENST00000466171 GPAT2Q6NUI2 795 aa6.01□□□□□ -1.45
CCDC93-205ENST00000466171 CABLES1Q8TDN4 633 aa6.01□□□□□ -1.45
CCDC93-205ENST00000466171 FOXJ1Q92949 421 aa6.01□□□□□ -1.45
CCDC93-205ENST00000466171 CDK15Q96Q40 435 aa6.01□□□□□ -1.45
CCDC93-205ENST00000466171 NBPF14Q5TI25 921 aa6□□□□□ -1.45
CCDC93-205ENST00000466171 MYSM1Q5VVJ2 828 aa6□□□□□ -1.45
CCDC93-205ENST00000466171 PURBQ96QR8 312 aaKnown RBP6□□□□□ -1.45
CCDC93-205ENST00000466171 RSPH6AQ9H0K4 717 aa6□□□□□ -1.45
CCDC93-205ENST00000466171 RNF225M0QZC1 329 aaPredicted RBP5.99□□□□□ -1.45
CCDC93-205ENST00000466171 ZIC2O95409 532 aaPredicted RBP5.99□□□□□ -1.45
CCDC93-205ENST00000466171 LILRB3O75022 631 aa5.98□□□□□ -1.45
CCDC93-205ENST00000466171 LIMD1Q9UGP4 676 aa5.98□□□□□ -1.45
CCDC93-205ENST00000466171 DNMT3AQ9Y6K1 912 aaPredicted RBP5.98□□□□□ -1.45
CCDC93-205ENST00000466171 SOBPA7XYQ1 873 aa5.97□□□□□ -1.45
CCDC93-205ENST00000466171 PER1O15534 1290 aaPredicted RBP5.97□□□□□ -1.45
CCDC93-205ENST00000466171 MAN1A2O60476 641 aa5.97□□□□□ -1.45
CCDC93-205ENST00000466171 CLK2P49760 499 aaKnown RBP5.97□□□□□ -1.45
CCDC93-205ENST00000466171 GPKOWQ92917 476 aaPredicted RBP eCLIP5.97□□□□□ -1.45
CCDC93-205ENST00000466171 KLF16Q9BXK1 252 aaPredicted RBP5.97□□□□□ -1.45
CCDC93-205ENST00000466171 IGHA1P01876 353 aa5.96□□□□□ -1.46
CCDC93-205ENST00000466171 BMP2P12643 396 aa5.96□□□□□ -1.46
CCDC93-205ENST00000466171 QPCTQ16769 361 aa5.96□□□□□ -1.46
CCDC93-205ENST00000466171 C6orf118Q5T5N4 469 aa5.96□□□□□ -1.46
CCDC93-205ENST00000466171 VASH1Q7L8A9 365 aaPredicted RBP5.96□□□□□ -1.46
CCDC93-205ENST00000466171 ITPKCQ96DU7 683 aa5.96□□□□□ -1.46
CCDC93-205ENST00000466171 ZFAND3Q9H8U3 227 aa5.96□□□□□ -1.46
CCDC93-205ENST00000466171 SLC24A3Q9HC58 644 aa5.96□□□□□ -1.46
CCDC93-205ENST00000466171 ADAMTS8Q9UP79 889 aa5.96□□□□□ -1.46
CCDC93-205ENST00000466171 MAP4K5Q9Y4K4 846 aa5.96□□□□□ -1.46
CCDC93-205ENST00000466171 MAGEB6P1A0A0J9YX57 407 aa5.95□□□□□ -1.46
CCDC93-205ENST00000466171 C4orf48Q5BLP8 95 aa5.95□□□□□ -1.46
CCDC93-205ENST00000466171 KRTAP1-3Q8IUG1 177 aa5.95□□□□□ -1.46
CCDC93-205ENST00000466171 PSMG3-AS1Q96PY0 264 aa5.95□□□□□ -1.46
CCDC93-205ENST00000466171 EMILIN1Q9Y6C2 1016 aa5.95□□□□□ -1.46
CCDC93-205ENST00000466171 NR3C2P08235 984 aa5.94□□□□□ -1.46
CCDC93-205ENST00000466171 FSHRP23945 695 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms