RNA–Protein interactions for RNA: ENST00000466138.1

CSF3R-208, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 3

Gene CSF3R, Length 335 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-208ENST00000466138 KIF3CO14782 793 aa16.42■□□□□ 0.22
CSF3R-208ENST00000466138 NLGN2Q8NFZ4 835 aa16.42■□□□□ 0.22
CSF3R-208ENST00000466138 MAP3K5Q99683 1374 aa16.39■□□□□ 0.21
CSF3R-208ENST00000466138 ABCC5O15440 1437 aa16.39■□□□□ 0.21
CSF3R-208ENST00000466138 GRIN3BO60391 1043 aa16.39■□□□□ 0.21
CSF3R-208ENST00000466138 AATKQ6ZMQ8 1374 aa16.38■□□□□ 0.21
CSF3R-208ENST00000466138 STRN4Q9NRL3 753 aa16.38■□□□□ 0.21
CSF3R-208ENST00000466138 NEXMIFQ5QGS0 1516 aa16.38■□□□□ 0.21
CSF3R-208ENST00000466138 HSPA1AP0DMV8 641 aaKnown RBP16.37■□□□□ 0.21
CSF3R-208ENST00000466138 HSPA1BP0DMV9 641 aaKnown RBP16.37■□□□□ 0.21
CSF3R-208ENST00000466138 SLC15A2Q16348 729 aa16.37■□□□□ 0.21
CSF3R-208ENST00000466138 SPATA31A1Q5TZJ5 1347 aa16.37■□□□□ 0.21
CSF3R-208ENST00000466138 TNS3Q68CZ2 1445 aa16.36■□□□□ 0.21
CSF3R-208ENST00000466138 ZNF326Q5BKZ1 582 aaKnown RBP16.36■□□□□ 0.21
CSF3R-208ENST00000466138 PTF1AQ7RTS3 328 aa16.36■□□□□ 0.21
CSF3R-208ENST00000466138 PROM2Q8N271 834 aa16.35■□□□□ 0.21
CSF3R-208ENST00000466138 ABCA3Q99758 1704 aa16.35■□□□□ 0.21
CSF3R-208ENST00000466138 WDR90Q96KV7 1748 aa16.34■□□□□ 0.21
CSF3R-208ENST00000466138 CCDC144AA2RUR9 1427 aa16.34■□□□□ 0.21
CSF3R-208ENST00000466138 TECPR2O15040 1411 aa16.33■□□□□ 0.2
CSF3R-208ENST00000466138 CROCC2H7BZ55 1655 aa16.32■□□□□ 0.2
CSF3R-208ENST00000466138 PLSCR1O15162 318 aa16.32■□□□□ 0.2
CSF3R-208ENST00000466138 ADCY9O60503 1353 aa16.31■□□□□ 0.2
CSF3R-208ENST00000466138 PSME1Q06323 249 aa16.3■□□□□ 0.2
CSF3R-208ENST00000466138 CHIC2Q9UKJ5 165 aa16.3■□□□□ 0.2
CSF3R-208ENST00000466138 COL14A1Q05707 1796 aaKnown RBP16.29■□□□□ 0.2
CSF3R-208ENST00000466138 TOMM70O94826 608 aa16.29■□□□□ 0.2
CSF3R-208ENST00000466138 RRBP1Q9P2E9 1410 aaKnown RBP16.28■□□□□ 0.2
CSF3R-208ENST00000466138 PRDM11Q9NQV5 511 aa16.27■□□□□ 0.2
CSF3R-208ENST00000466138 PCNTO95613 3336 aa16.27■□□□□ 0.19
CSF3R-208ENST00000466138 CHRNA2Q15822 529 aa16.26■□□□□ 0.19
CSF3R-208ENST00000466138 TXNRD1Q16881 649 aa16.25■□□□□ 0.19
CSF3R-208ENST00000466138 CDC42BPGQ6DT37 1551 aa16.25■□□□□ 0.19
CSF3R-208ENST00000466138 ARHGEF10O15013 1369 aa16.25■□□□□ 0.19
CSF3R-208ENST00000466138 POLD1P28340 1107 aa16.24■□□□□ 0.19
CSF3R-208ENST00000466138 NAIPQ13075 1403 aa16.24■□□□□ 0.19
CSF3R-208ENST00000466138 HFM1A2PYH4 1435 aa16.23■□□□□ 0.19
CSF3R-208ENST00000466138 MLLT1Q03111 559 aaPredicted RBP16.23■□□□□ 0.19
CSF3R-208ENST00000466138 MYOM3Q5VTT5 1437 aa16.21■□□□□ 0.19
CSF3R-208ENST00000466138 EVA1CP58658 441 aa16.21■□□□□ 0.19
CSF3R-208ENST00000466138 RGPD3A6NKT7 1758 aaPredicted RBP16.21■□□□□ 0.18
CSF3R-208ENST00000466138 RGPD4Q7Z3J3 1758 aa16.21■□□□□ 0.18
CSF3R-208ENST00000466138 BARGINQ6ZT62 677 aa16.2■□□□□ 0.18
CSF3R-208ENST00000466138 PHF8Q9UPP1 1060 aa16.2■□□□□ 0.18
CSF3R-208ENST00000466138 VPS8Q8N3P4 1428 aa16.19■□□□□ 0.18
CSF3R-208ENST00000466138 SBNO1A3KN83 1393 aa16.19■□□□□ 0.18
CSF3R-208ENST00000466138 WAPLQ7Z5K2 1190 aa16.19■□□□□ 0.18
CSF3R-208ENST00000466138 PMFBP1Q8TBY8 1022 aa16.19■□□□□ 0.18
CSF3R-208ENST00000466138 KIF1AQ12756 1690 aa16.18■□□□□ 0.18
CSF3R-208ENST00000466138 NMRK2Q9NPI5 230 aa16.17■□□□□ 0.18
CSF3R-208ENST00000466138 OVOS2A0A0G2JMS6 1433 aa16.17■□□□□ 0.18
CSF3R-208ENST00000466138 OVOS2A0A0J9YW53 1432 aa16.17■□□□□ 0.18
CSF3R-208ENST00000466138 OVOS2Q6IE36 1432 aa16.17■□□□□ 0.18
CSF3R-208ENST00000466138 LARP1Q6PKG0 1096 aaKnown RBP16.16■□□□□ 0.18
CSF3R-208ENST00000466138 TCP11L2Q8N4U5 519 aa16.16■□□□□ 0.18
CSF3R-208ENST00000466138 IQGAP3Q86VI3 1631 aa16.16■□□□□ 0.18
CSF3R-208ENST00000466138 STK26Q9P289 416 aa16.14■□□□□ 0.17
CSF3R-208ENST00000466138 KIAA0232Q92628 1395 aa16.13■□□□□ 0.17
CSF3R-208ENST00000466138 ANKRD30AQ9BXX3 1397 aa16.13■□□□□ 0.17
CSF3R-208ENST00000466138 ZNF827Q17R98 1081 aa16.13■□□□□ 0.17
CSF3R-208ENST00000466138 C16orf71Q8IYS4 520 aaPredicted RBP16.13■□□□□ 0.17
CSF3R-208ENST00000466138 USP19O94966 1318 aa16.13■□□□□ 0.17
CSF3R-208ENST00000466138 ZC3H6P61129 1189 aaKnown RBP16.12■□□□□ 0.17
CSF3R-208ENST00000466138 DHX57Q6P158 1386 aaKnown RBP16.12■□□□□ 0.17
CSF3R-208ENST00000466138 E9PCH4 1651 aa16.11■□□□□ 0.17
CSF3R-208ENST00000466138 C11orf95C9JLR9 678 aaPredicted RBP16.11■□□□□ 0.17
CSF3R-208ENST00000466138 RBM46Q8TBY0 533 aaKnown RBP16.11■□□□□ 0.17
CSF3R-208ENST00000466138 ABHD8Q96I13 439 aa16.1■□□□□ 0.17
CSF3R-208ENST00000466138 SBF2Q86WG5 1849 aa16.1■□□□□ 0.17
CSF3R-208ENST00000466138 SSH2Q76I76 1423 aa16.1■□□□□ 0.17
CSF3R-208ENST00000466138 TOPAZ1Q8N9V7 1692 aa16.09■□□□□ 0.17
CSF3R-208ENST00000466138 CCDC85CA6NKD9 419 aa16.09■□□□□ 0.17
CSF3R-208ENST00000466138 PLEKHH1Q9ULM0 1364 aa16.09■□□□□ 0.17
CSF3R-208ENST00000466138 PEAK1Q9H792 1746 aa16.08■□□□□ 0.17
CSF3R-208ENST00000466138 DAPK1P53355 1430 aa16.08■□□□□ 0.16
CSF3R-208ENST00000466138 FMN2Q9NZ56 1722 aa16.08■□□□□ 0.16
CSF3R-208ENST00000466138 RGPD8O14715 1765 aaPredicted RBP16.08■□□□□ 0.16
CSF3R-208ENST00000466138 ARHGEF28Q8N1W1 1705 aaKnown RBP16.06■□□□□ 0.16
CSF3R-208ENST00000466138 PAK3O75914 559 aaPredicted RBP16.06■□□□□ 0.16
CSF3R-208ENST00000466138 KIAA1210Q9ULL0 1709 aa16.05■□□□□ 0.16
CSF3R-208ENST00000466138 NRXN1Q9ULB1 1477 aa16.05■□□□□ 0.16
CSF3R-208ENST00000466138 FOXN1O15353 648 aa16.05■□□□□ 0.16
CSF3R-208ENST00000466138 FSTL1Q12841 308 aa16.04■□□□□ 0.16
CSF3R-208ENST00000466138 DDB1Q16531 1140 aa16.04■□□□□ 0.16
CSF3R-208ENST00000466138 SLC16A10Q8TF71 515 aa16.03■□□□□ 0.16
CSF3R-208ENST00000466138 TULP4Q9NRJ4 1543 aa16.03■□□□□ 0.16
CSF3R-208ENST00000466138 ATP7BP35670 1465 aa16.03■□□□□ 0.16
CSF3R-208ENST00000466138 PRAG1Q86YV5 1406 aa16.02■□□□□ 0.16
CSF3R-208ENST00000466138 MARCH10Q8NA82 808 aaPredicted RBP16.02■□□□□ 0.16
CSF3R-208ENST00000466138 CFAP44Q96MT7 982 aa16.02■□□□□ 0.16
CSF3R-208ENST00000466138 NUTM2GQ5VZR2 741 aa16.01■□□□□ 0.15
CSF3R-208ENST00000466138 MSL1Q68DK7 614 aa16.01■□□□□ 0.15
CSF3R-208ENST00000466138 PARP4Q9UKK3 1724 aaKnown RBP16.01■□□□□ 0.15
CSF3R-208ENST00000466138 PNPLA7Q6ZV29 1317 aa16■□□□□ 0.15
CSF3R-208ENST00000466138 MSH5O43196 834 aa16■□□□□ 0.15
CSF3R-208ENST00000466138 THRAP3Q9Y2W1 955 aaKnown RBP16■□□□□ 0.15
CSF3R-208ENST00000466138 ANKRD50Q9ULJ7 1429 aa15.99■□□□□ 0.15
CSF3R-208ENST00000466138 PRDM10Q9NQV6 1147 aa15.98■□□□□ 0.15
CSF3R-208ENST00000466138 VGFO15240 615 aaPredicted RBP15.97■□□□□ 0.15
CSF3R-208ENST00000466138 ACSBG1Q96GR2 724 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms