RNA–Protein interactions for RNA: ENST00000465705.3

TMCO1-204, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5

Gene TMCO1, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-204ENST00000465705 TESK2Q96S53 571 aa15.85■□□□□ 0.13
TMCO1-204ENST00000465705 COL16A1Q07092 1604 aaPredicted RBP15.85■□□□□ 0.13
TMCO1-204ENST00000465705 NPHP3Q7Z494 1330 aa15.85■□□□□ 0.13
TMCO1-204ENST00000465705 DDX17Q92841 729 aaKnown RBP15.84■□□□□ 0.13
TMCO1-204ENST00000465705 CCDC61Q9Y6R9 512 aa15.84■□□□□ 0.13
TMCO1-204ENST00000465705 FOXO3O43524 673 aa15.83■□□□□ 0.12
TMCO1-204ENST00000465705 PMFBP1Q8TBY8 1022 aa15.83■□□□□ 0.12
TMCO1-204ENST00000465705 ATAD2Q6PL18 1390 aa15.83■□□□□ 0.12
TMCO1-204ENST00000465705 PPIP5K1Q6PFW1 1433 aa15.82■□□□□ 0.12
TMCO1-204ENST00000465705 TMF1P82094 1093 aa15.81■□□□□ 0.12
TMCO1-204ENST00000465705 PXDNQ92626 1479 aa15.8■□□□□ 0.12
TMCO1-204ENST00000465705 SOS2Q07890 1332 aaPredicted RBP15.8■□□□□ 0.12
TMCO1-204ENST00000465705 HSPA5P11021 654 aaKnown RBP15.8■□□□□ 0.12
TMCO1-204ENST00000465705 XPCQ01831 940 aaPredicted RBP15.8■□□□□ 0.12
TMCO1-204ENST00000465705 NGDNQ8NEJ9 315 aaKnown RBP15.8■□□□□ 0.12
TMCO1-204ENST00000465705 JCADQ9P266 1359 aa15.78■□□□□ 0.12
TMCO1-204ENST00000465705 ZEB1P37275 1124 aaPredicted RBP15.78■□□□□ 0.12
TMCO1-204ENST00000465705 FXR2P51116 673 aaKnown RBP eCLIP15.78■□□□□ 0.123e-10■■■■■ 40.7
TMCO1-204ENST00000465705 PSME1Q06323 249 aa15.78■□□□□ 0.12
TMCO1-204ENST00000465705 LRRC59Q96AG4 307 aaKnown RBP15.78■□□□□ 0.12
TMCO1-204ENST00000465705 POLR3AO14802 1390 aaPredicted RBP15.77■□□□□ 0.12
TMCO1-204ENST00000465705 PLEKHG3A1L390 1219 aa15.77■□□□□ 0.12
TMCO1-204ENST00000465705 CDCA8Q53HL2 280 aa15.77■□□□□ 0.12
TMCO1-204ENST00000465705 KRT28Q7Z3Y7 464 aa15.77■□□□□ 0.12
TMCO1-204ENST00000465705 PUS7Q96PZ0 661 aaKnown RBP15.77■□□□□ 0.12
TMCO1-204ENST00000465705 CABP1Q9NZU7 370 aa15.77■□□□□ 0.12
TMCO1-204ENST00000465705 ACEP12821 1306 aa15.76■□□□□ 0.11
TMCO1-204ENST00000465705 SHPRHQ149N8 1683 aa15.76■□□□□ 0.11
TMCO1-204ENST00000465705 TMC1Q8TDI8 760 aa15.75■□□□□ 0.11
TMCO1-204ENST00000465705 TNS3Q68CZ2 1445 aa15.75■□□□□ 0.11
TMCO1-204ENST00000465705 SBNO1A3KN83 1393 aa15.75■□□□□ 0.11
TMCO1-204ENST00000465705 NINLQ9Y2I6 1382 aa15.75■□□□□ 0.11
TMCO1-204ENST00000465705 TRPM3Q9HCF6 1732 aaPredicted RBP15.74■□□□□ 0.11
TMCO1-204ENST00000465705 PNPLA6Q8IY17 1366 aa15.74■□□□□ 0.11
TMCO1-204ENST00000465705 SPATA31A3Q5VYP0 1347 aa15.72■□□□□ 0.11
TMCO1-204ENST00000465705 SPATA31A6Q5VVP1 1343 aa15.71■□□□□ 0.11
TMCO1-204ENST00000465705 USP6P35125 1406 aa15.71■□□□□ 0.11
TMCO1-204ENST00000465705 PAK3O75914 559 aaPredicted RBP15.71■□□□□ 0.11
TMCO1-204ENST00000465705 LMOD2Q6P5Q4 547 aa15.71■□□□□ 0.11
TMCO1-204ENST00000465705 AKAP12Q02952 1782 aa15.71■□□□□ 0.11
TMCO1-204ENST00000465705 ARHGEF10O15013 1369 aa15.71■□□□□ 0.11
TMCO1-204ENST00000465705 COL22A1Q8NFW1 1626 aaPredicted RBP15.71■□□□□ 0.11
TMCO1-204ENST00000465705 HDGFL2Q7Z4V5 671 aaPredicted RBP15.7■□□□□ 0.1
TMCO1-204ENST00000465705 POLR3GLQ9BT43 218 aa15.7■□□□□ 0.1
TMCO1-204ENST00000465705 SLC12A5Q9H2X9 1139 aa15.7■□□□□ 0.1
TMCO1-204ENST00000465705 ALS2Q96Q42 1657 aa15.7■□□□□ 0.1
TMCO1-204ENST00000465705 CPSF1Q10570 1443 aaKnown RBP15.69■□□□□ 0.1
TMCO1-204ENST00000465705 MON2Q7Z3U7 1717 aa15.69■□□□□ 0.1
TMCO1-204ENST00000465705 TERF2IPQ9NYB0 399 aa15.69■□□□□ 0.1
TMCO1-204ENST00000465705 BRD4O60885 1362 aaPredicted RBP15.69■□□□□ 0.1
TMCO1-204ENST00000465705 KTN1Q86UP2 1357 aaKnown RBP15.69■□□□□ 0.1
TMCO1-204ENST00000465705 CD163L1Q9NR16 1453 aa15.69■□□□□ 0.1
TMCO1-204ENST00000465705 MYOM1P52179 1685 aa15.68■□□□□ 0.1
TMCO1-204ENST00000465705 NRKQ7Z2Y5 1582 aa15.68■□□□□ 0.1
TMCO1-204ENST00000465705 A0A1W2PP64 1363 aa15.68■□□□□ 0.1
TMCO1-204ENST00000465705 MED1Q15648 1581 aaPredicted RBP15.67■□□□□ 0.1
TMCO1-204ENST00000465705 ILDR2Q71H61 639 aa15.67■□□□□ 0.1
TMCO1-204ENST00000465705 ANKRD36BQ8N2N9 1353 aa15.66■□□□□ 0.1
TMCO1-204ENST00000465705 NUTM2BA6NNL0 878 aaPredicted RBP15.66■□□□□ 0.1
TMCO1-204ENST00000465705 NUTM2EB1AL46 878 aaPredicted RBP15.66■□□□□ 0.1
TMCO1-204ENST00000465705 PRR29P0C7W0 189 aa15.66■□□□□ 0.1
TMCO1-204ENST00000465705 NUTM2AQ8IVF1 878 aaPredicted RBP15.66■□□□□ 0.1
TMCO1-204ENST00000465705 SSH2Q76I76 1423 aa15.66■□□□□ 0.1
TMCO1-204ENST00000465705 LRP6O75581 1613 aa15.65■□□□□ 0.1
TMCO1-204ENST00000465705 SOCS7O14512 581 aa15.65■□□□□ 0.1
TMCO1-204ENST00000465705 EDC4Q6P2E9 1401 aaKnown RBP15.65■□□□□ 0.1
TMCO1-204ENST00000465705 C11orf95C9JLR9 678 aaPredicted RBP15.64■□□□□ 0.09
TMCO1-204ENST00000465705 PLEKHG5O94827 1062 aa15.64■□□□□ 0.09
TMCO1-204ENST00000465705 HAP1P54257 671 aaPredicted RBP15.64■□□□□ 0.09
TMCO1-204ENST00000465705 ABTB2Q8N961 1025 aa15.64■□□□□ 0.09
TMCO1-204ENST00000465705 KIF7Q2M1P5 1343 aa15.64■□□□□ 0.09
TMCO1-204ENST00000465705 TTC21AQ8NDW8 1320 aa15.64■□□□□ 0.09
TMCO1-204ENST00000465705 ABCA3Q99758 1704 aa15.63■□□□□ 0.09
TMCO1-204ENST00000465705 PRKAR2AP13861 404 aaKnown RBP15.63■□□□□ 0.09
TMCO1-204ENST00000465705 MEX3CQ5U5Q3 659 aaKnown RBP15.63■□□□□ 0.09
TMCO1-204ENST00000465705 PIK3C2AO00443 1686 aa15.63■□□□□ 0.09
TMCO1-204ENST00000465705 TTC21BQ7Z4L5 1316 aa15.63■□□□□ 0.09
TMCO1-204ENST00000465705 NUTM2GQ5VZR2 741 aa15.62■□□□□ 0.09
TMCO1-204ENST00000465705 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.61■□□□□ 0.09
TMCO1-204ENST00000465705 CABLES1Q8TDN4 633 aa15.61■□□□□ 0.09
TMCO1-204ENST00000465705 CRYBG1Q9Y4K1 1723 aa15.6■□□□□ 0.09
TMCO1-204ENST00000465705 ADAMTS2O95450 1211 aa15.6■□□□□ 0.09
TMCO1-204ENST00000465705 NLRP13Q86W25 1043 aa15.6■□□□□ 0.09
TMCO1-204ENST00000465705 PHRF1Q9P1Y6 1649 aaKnown RBP15.6■□□□□ 0.09
TMCO1-204ENST00000465705 CCDC7Q96M83 1385 aa15.6■□□□□ 0.09
TMCO1-204ENST00000465705 NLRP6P59044 892 aa15.59■□□□□ 0.09
TMCO1-204ENST00000465705 CHADLQ6NUI6 762 aa15.59■□□□□ 0.09
TMCO1-204ENST00000465705 NSD3Q9BZ95 1437 aa15.59■□□□□ 0.09
TMCO1-204ENST00000465705 MARF1Q9Y4F3 1742 aaKnown RBP15.58■□□□□ 0.08
TMCO1-204ENST00000465705 USP19O94966 1318 aa15.58■□□□□ 0.08
TMCO1-204ENST00000465705 WASHC2AQ641Q2 1341 aa15.58■□□□□ 0.08
TMCO1-204ENST00000465705 NME9Q86XW9 330 aa15.57■□□□□ 0.08
TMCO1-204ENST00000465705 C8orf37Q96NL8 207 aa15.57■□□□□ 0.08
TMCO1-204ENST00000465705 FKBP8Q14318 412 aa15.56■□□□□ 0.08
TMCO1-204ENST00000465705 SLIT3O75094 1523 aa15.56■□□□□ 0.08
TMCO1-204ENST00000465705 USP54Q70EL1 1684 aa15.56■□□□□ 0.08
TMCO1-204ENST00000465705 KIF20BQ96Q89 1820 aa15.55■□□□□ 0.08
TMCO1-204ENST00000465705 USP31Q70CQ4 1352 aa15.55■□□□□ 0.08
TMCO1-204ENST00000465705 CARD14Q9BXL6 1004 aa15.55■□□□□ 0.08
TMCO1-204ENST00000465705 PANK3Q9H999 370 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms