RNA–Protein interactions for RNA: ENST00000465634.5

TRIM5-208, Transcript of tripartite motif containing 5, human

TSL 1 (best)

Gene TRIM5, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM5-208	ENST00000465634	AKAP12	Q02952	1782 aa		13.18	□□□□□ -0.3
TRIM5-208	ENST00000465634	FYB1	O15117	783 aa		13.18	□□□□□ -0.3
TRIM5-208	ENST00000465634	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.18	□□□□□ -0.3
TRIM5-208	ENST00000465634	LRRC59	Q96AG4	307 aa	Known RBP	13.18	□□□□□ -0.3
TRIM5-208	ENST00000465634	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.17	□□□□□ -0.3
TRIM5-208	ENST00000465634	PXDN	Q92626	1479 aa		13.17	□□□□□ -0.3
TRIM5-208	ENST00000465634	PAK3	O75914	559 aa	Predicted RBP	13.17	□□□□□ -0.3
TRIM5-208	ENST00000465634	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
TRIM5-208	ENST00000465634	MON2	Q7Z3U7	1717 aa		13.16	□□□□□ -0.3
TRIM5-208	ENST00000465634	SPATA31A3	Q5VYP0	1347 aa		13.16	□□□□□ -0.3
TRIM5-208	ENST00000465634	XPC	Q01831	940 aa	Predicted RBP	13.16	□□□□□ -0.3
TRIM5-208	ENST00000465634	NLRP13	Q86W25	1043 aa		13.16	□□□□□ -0.3
TRIM5-208	ENST00000465634	ABTB2	Q8N961	1025 aa		13.16	□□□□□ -0.3
TRIM5-208	ENST00000465634	DDX17	Q92841	729 aa	Known RBP	13.16	□□□□□ -0.3
TRIM5-208	ENST00000465634	ARHGEF10	O15013	1369 aa		13.16	□□□□□ -0.3
TRIM5-208	ENST00000465634	NHSL1	Q5SYE7	1610 aa		13.16	□□□□□ -0.3
TRIM5-208	ENST00000465634	USP31	Q70CQ4	1352 aa		13.16	□□□□□ -0.3
TRIM5-208	ENST00000465634	COG3	Q96JB2	828 aa		13.15	□□□□□ -0.3
TRIM5-208	ENST00000465634	TNS3	Q68CZ2	1445 aa		13.14	□□□□□ -0.31
TRIM5-208	ENST00000465634	NLRP6	P59044	892 aa		13.14	□□□□□ -0.31
TRIM5-208	ENST00000465634	DIEXF	Q68CQ4	756 aa	Known RBP	13.14	□□□□□ -0.31
TRIM5-208	ENST00000465634	FBXO41	Q8TF61	875 aa		13.14	□□□□□ -0.31
TRIM5-208	ENST00000465634	NRK	Q7Z2Y5	1582 aa		13.14	□□□□□ -0.31
TRIM5-208	ENST00000465634	RALBP1	Q15311	655 aa		13.13	□□□□□ -0.31
TRIM5-208	ENST00000465634	NME9	Q86XW9	330 aa		13.13	□□□□□ -0.31
TRIM5-208	ENST00000465634	ANP32C	O43423	234 aa		13.12	□□□□□ -0.31
TRIM5-208	ENST00000465634	LMOD2	Q6P5Q4	547 aa		13.12	□□□□□ -0.31
TRIM5-208	ENST00000465634	MORC1	Q86VD1	984 aa		13.12	□□□□□ -0.31
TRIM5-208	ENST00000465634	GGNBP2	Q9H3C7	697 aa		13.12	□□□□□ -0.31
TRIM5-208	ENST00000465634	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.12	□□□□□ -0.31
TRIM5-208	ENST00000465634	CC2D1B	Q5T0F9	858 aa	Known RBP	13.11	□□□□□ -0.31
TRIM5-208	ENST00000465634	KCNH5	Q8NCM2	988 aa		13.11	□□□□□ -0.31
TRIM5-208	ENST00000465634	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.1	□□□□□ -0.31
TRIM5-208	ENST00000465634	OVOS2	A0A0J9YW53	1432 aa		13.1	□□□□□ -0.31
TRIM5-208	ENST00000465634	OVOS2	Q6IE36	1432 aa		13.1	□□□□□ -0.31
TRIM5-208	ENST00000465634	USP19	O94966	1318 aa		13.1	□□□□□ -0.31
TRIM5-208	ENST00000465634	ALS2	Q96Q42	1657 aa		13.09	□□□□□ -0.31
TRIM5-208	ENST00000465634	PHLPP1	O60346	1717 aa		13.09	□□□□□ -0.31
TRIM5-208	ENST00000465634	COL16A1	Q07092	1604 aa	Predicted RBP	13.09	□□□□□ -0.31
TRIM5-208	ENST00000465634	PARD3	Q8TEW0	1356 aa		13.08	□□□□□ -0.31
TRIM5-208	ENST00000465634	JCAD	Q9P266	1359 aa		13.08	□□□□□ -0.31
TRIM5-208	ENST00000465634	GC	P02774	474 aa		13.08	□□□□□ -0.32
TRIM5-208	ENST00000465634	HSPA1L	P34931	641 aa		13.08	□□□□□ -0.32
TRIM5-208	ENST00000465634	NUTM2G	Q5VZR2	741 aa		13.08	□□□□□ -0.32
TRIM5-208	ENST00000465634	ZRANB1	Q9UGI0	708 aa		13.08	□□□□□ -0.32
TRIM5-208	ENST00000465634	PIK3C2A	O00443	1686 aa		13.08	□□□□□ -0.32
TRIM5-208	ENST00000465634	AATK	Q6ZMQ8	1374 aa		13.07	□□□□□ -0.32
TRIM5-208	ENST00000465634	PNPLA6	Q8IY17	1366 aa		13.07	□□□□□ -0.32
TRIM5-208	ENST00000465634	USP54	Q70EL1	1684 aa		13.07	□□□□□ -0.32
TRIM5-208	ENST00000465634	MED1	Q15648	1581 aa	Predicted RBP	13.07	□□□□□ -0.32
TRIM5-208	ENST00000465634	KIF20B	Q96Q89	1820 aa		13.06	□□□□□ -0.32
TRIM5-208	ENST00000465634	SLIT3	O75094	1523 aa		13.05	□□□□□ -0.32
TRIM5-208	ENST00000465634	SPATA31A6	Q5VVP1	1343 aa		13.05	□□□□□ -0.32
TRIM5-208	ENST00000465634	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.05	□□□□□ -0.32
TRIM5-208	ENST00000465634	KIF24	Q5T7B8	1368 aa		13.05	□□□□□ -0.32
TRIM5-208	ENST00000465634	HAP1	P54257	671 aa	Predicted RBP	13.04	□□□□□ -0.32
TRIM5-208	ENST00000465634	ANKRD26	Q9UPS8	1709 aa		13.04	□□□□□ -0.32
TRIM5-208	ENST00000465634	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.03	□□□□□ -0.32
TRIM5-208	ENST00000465634	PPP2R1A	P30153	589 aa		13.03	□□□□□ -0.32
TRIM5-208	ENST00000465634	CNGB1	Q14028	1251 aa	Predicted RBP	13.03	□□□□□ -0.32
TRIM5-208	ENST00000465634	ARHGEF25	Q86VW2	580 aa		13.03	□□□□□ -0.32
TRIM5-208	ENST00000465634	POLK	Q9UBT6	870 aa		13.03	□□□□□ -0.32
TRIM5-208	ENST00000465634	CPD	O75976	1380 aa		13.03	□□□□□ -0.32
TRIM5-208	ENST00000465634	TNNT2	P45379	298 aa	Predicted RBP	13.02	□□□□□ -0.33
TRIM5-208	ENST00000465634	CABLES1	Q8TDN4	633 aa		13.02	□□□□□ -0.33
TRIM5-208	ENST00000465634	MTHFS	P49914	203 aa		13.01	□□□□□ -0.33
TRIM5-208	ENST00000465634	SHPRH	Q149N8	1683 aa		13.01	□□□□□ -0.33
TRIM5-208	ENST00000465634	NFAT5	O94916	1531 aa		13	□□□□□ -0.33
TRIM5-208	ENST00000465634	RTL1	A6NKG5	1358 aa		13	□□□□□ -0.33
TRIM5-208	ENST00000465634	INSR	P06213	1382 aa		13	□□□□□ -0.33
TRIM5-208	ENST00000465634	MAP3K19	Q56UN5	1328 aa		13	□□□□□ -0.33
TRIM5-208	ENST00000465634	CFAP53	Q96M91	514 aa		13	□□□□□ -0.33
TRIM5-208	ENST00000465634	MARF1	Q9Y4F3	1742 aa	Known RBP	12.99	□□□□□ -0.33
TRIM5-208	ENST00000465634	SMG6	Q86US8	1419 aa	Known RBP	12.99	□□□□□ -0.33
TRIM5-208	ENST00000465634	CCER2	I3L3R5	266 aa		12.99	□□□□□ -0.33
TRIM5-208	ENST00000465634	SOX12	O15370	315 aa		12.99	□□□□□ -0.33
TRIM5-208	ENST00000465634	FBLN1	P23142	703 aa		12.99	□□□□□ -0.33
TRIM5-208	ENST00000465634	AMPH	P49418	695 aa		12.99	□□□□□ -0.33
TRIM5-208	ENST00000465634	ZC3H6	P61129	1189 aa	Known RBP	12.99	□□□□□ -0.33
TRIM5-208	ENST00000465634	RRS1	Q15050	365 aa	Known RBP	12.99	□□□□□ -0.33
TRIM5-208	ENST00000465634	IP6K1	Q92551	441 aa		12.99	□□□□□ -0.33
TRIM5-208	ENST00000465634	FLT4	P35916	1363 aa		12.98	□□□□□ -0.33
TRIM5-208	ENST00000465634	PLEKHG5	O94827	1062 aa		12.98	□□□□□ -0.33
TRIM5-208	ENST00000465634	PRDM11	Q9NQV5	511 aa		12.98	□□□□□ -0.33
TRIM5-208	ENST00000465634	EMILIN1	Q9Y6C2	1016 aa		12.98	□□□□□ -0.33
TRIM5-208	ENST00000465634	CRYBG1	Q9Y4K1	1723 aa		12.98	□□□□□ -0.33
TRIM5-208	ENST00000465634	PHRF1	Q9P1Y6	1649 aa	Known RBP	12.98	□□□□□ -0.33
TRIM5-208	ENST00000465634	ABCC6	O95255	1503 aa		12.98	□□□□□ -0.33
TRIM5-208	ENST00000465634	KIAA0232	Q92628	1395 aa		12.97	□□□□□ -0.33
TRIM5-208	ENST00000465634	PPM1G	O15355	546 aa	Predicted RBP	12.97	□□□□□ -0.33
TRIM5-208	ENST00000465634	HOXC9	P31274	260 aa		12.97	□□□□□ -0.33
TRIM5-208	ENST00000465634	MIER1	Q8N108	512 aa		12.97	□□□□□ -0.33
TRIM5-208	ENST00000465634	NUTM2B	A6NNL0	878 aa	Predicted RBP	12.96	□□□□□ -0.33
TRIM5-208	ENST00000465634	NUTM2E	B1AL46	878 aa	Predicted RBP	12.96	□□□□□ -0.33
TRIM5-208	ENST00000465634	NUTM2A	Q8IVF1	878 aa	Predicted RBP	12.96	□□□□□ -0.33
TRIM5-208	ENST00000465634	CDK12	Q9NYV4	1490 aa	Predicted RBP	12.96	□□□□□ -0.34
TRIM5-208	ENST00000465634	BLM	P54132	1417 aa	Predicted RBP	12.96	□□□□□ -0.34
TRIM5-208	ENST00000465634	FAM83G	A6ND36	823 aa		12.95	□□□□□ -0.34
TRIM5-208	ENST00000465634	ABCA3	Q99758	1704 aa		12.94	□□□□□ -0.34
TRIM5-208	ENST00000465634	DIAPH1	O60610	1272 aa	Known RBP	12.94	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms