RNA–Protein interactions for RNA: ENST00000465143.1

ITSN1-223, Transcript of intersectin 1, human

TSL 3

Gene ITSN1, Length 614 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-223	ENST00000465143	WASL	O00401	505 aa	Predicted RBP	10.85	□□□□□ -0.67
ITSN1-223	ENST00000465143	METRN	Q9UJH8	293 aa		10.85	□□□□□ -0.67
ITSN1-223	ENST00000465143	PHF8	Q9UPP1	1060 aa		10.85	□□□□□ -0.67
ITSN1-223	ENST00000465143	DLC1	Q96QB1	1528 aa		10.84	□□□□□ -0.67
ITSN1-223	ENST00000465143	IFT172	Q9UG01	1749 aa		10.84	□□□□□ -0.67
ITSN1-223	ENST00000465143	ROCK2	O75116	1388 aa	Known RBP	10.84	□□□□□ -0.67
ITSN1-223	ENST00000465143	EIF3A	Q14152	1382 aa	Known RBP	10.84	□□□□□ -0.67
ITSN1-223	ENST00000465143	LAMC1	P11047	1609 aa		10.84	□□□□□ -0.67
ITSN1-223	ENST00000465143	SOS2	Q07890	1332 aa	Predicted RBP	10.84	□□□□□ -0.67
ITSN1-223	ENST00000465143	CDC42BPG	Q6DT37	1551 aa		10.83	□□□□□ -0.68
ITSN1-223	ENST00000465143	PSME1	Q06323	249 aa		10.83	□□□□□ -0.68
ITSN1-223	ENST00000465143	AHDC1	Q5TGY3	1603 aa	Predicted RBP	10.83	□□□□□ -0.68
ITSN1-223	ENST00000465143	CENPJ	Q9HC77	1338 aa	Predicted RBP	10.83	□□□□□ -0.68
ITSN1-223	ENST00000465143	MED1	Q15648	1581 aa	Predicted RBP	10.82	□□□□□ -0.68
ITSN1-223	ENST00000465143	ILDR2	Q71H61	639 aa		10.82	□□□□□ -0.68
ITSN1-223	ENST00000465143	KRT28	Q7Z3Y7	464 aa		10.82	□□□□□ -0.68
ITSN1-223	ENST00000465143	PROM2	Q8N271	834 aa		10.82	□□□□□ -0.68
ITSN1-223	ENST00000465143	PMFBP1	Q8TBY8	1022 aa		10.82	□□□□□ -0.68
ITSN1-223	ENST00000465143	CDK19	Q9BWU1	502 aa		10.82	□□□□□ -0.68
ITSN1-223	ENST00000465143	NALCN	Q8IZF0	1738 aa		10.81	□□□□□ -0.68
ITSN1-223	ENST00000465143	POTEM	A6NI47	508 aa		10.81	□□□□□ -0.68
ITSN1-223	ENST00000465143	SRPK2	P78362	688 aa	Known RBP	10.81	□□□□□ -0.68
ITSN1-223	ENST00000465143	NBPF8	Q3BBV2	869 aa		10.81	□□□□□ -0.68
ITSN1-223	ENST00000465143	LMOD2	Q6P5Q4	547 aa		10.81	□□□□□ -0.68
ITSN1-223	ENST00000465143	NGDN	Q8NEJ9	315 aa	Known RBP	10.81	□□□□□ -0.68
ITSN1-223	ENST00000465143	CARD11	Q9BXL7	1154 aa		10.81	□□□□□ -0.68
ITSN1-223	ENST00000465143	PNPLA6	Q8IY17	1366 aa		10.8	□□□□□ -0.68
ITSN1-223	ENST00000465143	ADAMTS2	O95450	1211 aa		10.8	□□□□□ -0.68
ITSN1-223	ENST00000465143	C7	P10643	843 aa		10.8	□□□□□ -0.68
ITSN1-223	ENST00000465143	NUDT16	Q96DE0	195 aa	Known RBP	10.8	□□□□□ -0.68
ITSN1-223	ENST00000465143	CCDC61	Q9Y6R9	512 aa		10.8	□□□□□ -0.68
ITSN1-223	ENST00000465143	ANKAR	Q7Z5J8	1434 aa		10.8	□□□□□ -0.68
ITSN1-223	ENST00000465143	PHLPP1	O60346	1717 aa		10.8	□□□□□ -0.68
ITSN1-223	ENST00000465143	GPRASP1	Q5JY77	1395 aa		10.79	□□□□□ -0.68
ITSN1-223	ENST00000465143	PLEKHG5	O94827	1062 aa		10.79	□□□□□ -0.68
ITSN1-223	ENST00000465143	HAP1	P54257	671 aa	Predicted RBP	10.79	□□□□□ -0.68
ITSN1-223	ENST00000465143	ZNF772	Q68DY9	489 aa	Predicted RBP	10.79	□□□□□ -0.68
ITSN1-223	ENST00000465143	POTEG	Q6S5H5	508 aa		10.79	□□□□□ -0.68
ITSN1-223	ENST00000465143	SLC39A7	Q92504	469 aa		10.79	□□□□□ -0.68
ITSN1-223	ENST00000465143	C8orf37	Q96NL8	207 aa		10.79	□□□□□ -0.68
ITSN1-223	ENST00000465143	COL16A1	Q07092	1604 aa	Predicted RBP	10.79	□□□□□ -0.68
ITSN1-223	ENST00000465143	KNDC1	Q76NI1	1749 aa		10.78	□□□□□ -0.68
ITSN1-223	ENST00000465143	ATN1	P54259	1190 aa	Predicted RBP	10.78	□□□□□ -0.68
ITSN1-223	ENST00000465143	CABP2	Q9NPB3	220 aa		10.78	□□□□□ -0.68
ITSN1-223	ENST00000465143	RGS17	Q9UGC6	210 aa	Predicted RBP	10.78	□□□□□ -0.68
ITSN1-223	ENST00000465143	PRR36	Q9H6K5	1346 aa		10.78	□□□□□ -0.68
ITSN1-223	ENST00000465143	KIF12	Q96FN5	646 aa		10.77	□□□□□ -0.69
ITSN1-223	ENST00000465143	NGLY1	Q96IV0	654 aa		10.77	□□□□□ -0.69
ITSN1-223	ENST00000465143	TRPC6	Q9Y210	931 aa		10.77	□□□□□ -0.69
ITSN1-223	ENST00000465143	SPATA31A3	Q5VYP0	1347 aa		10.77	□□□□□ -0.69
ITSN1-223	ENST00000465143	EVC2	Q86UK5	1308 aa		10.76	□□□□□ -0.69
ITSN1-223	ENST00000465143	LRP6	O75581	1613 aa		10.76	□□□□□ -0.69
ITSN1-223	ENST00000465143	POTEA	Q6S8J7	498 aa		10.75	□□□□□ -0.69
ITSN1-223	ENST00000465143	AFF2	P51816	1311 aa		10.75	□□□□□ -0.69
ITSN1-223	ENST00000465143	SBNO1	A3KN83	1393 aa		10.75	□□□□□ -0.69
ITSN1-223	ENST00000465143	PXDN	Q92626	1479 aa		10.74	□□□□□ -0.69
ITSN1-223	ENST00000465143	TULP4	Q9NRJ4	1543 aa		10.74	□□□□□ -0.69
ITSN1-223	ENST00000465143	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.74	□□□□□ -0.69
ITSN1-223	ENST00000465143	ARHGEF10	O15013	1369 aa		10.74	□□□□□ -0.69
ITSN1-223	ENST00000465143	ADGRB2	O60241	1585 aa		10.73	□□□□□ -0.69
ITSN1-223	ENST00000465143	SOCS7	O14512	581 aa		10.73	□□□□□ -0.69
ITSN1-223	ENST00000465143	TNS3	Q68CZ2	1445 aa		10.73	□□□□□ -0.69
ITSN1-223	ENST00000465143	RALGAPB	Q86X10	1494 aa		10.73	□□□□□ -0.69
ITSN1-223	ENST00000465143	PLEKHG3	A1L390	1219 aa		10.72	□□□□□ -0.69
ITSN1-223	ENST00000465143	RXRB	P28702	533 aa		10.72	□□□□□ -0.69
ITSN1-223	ENST00000465143	MIER1	Q8N108	512 aa		10.72	□□□□□ -0.69
ITSN1-223	ENST00000465143	CABLES1	Q8TDN4	633 aa		10.72	□□□□□ -0.69
ITSN1-223	ENST00000465143	CABP1	Q9NZU7	370 aa		10.72	□□□□□ -0.69
ITSN1-223	ENST00000465143	USP21	Q9UK80	565 aa		10.72	□□□□□ -0.69
ITSN1-223	ENST00000465143	ACE	P12821	1306 aa		10.72	□□□□□ -0.69
ITSN1-223	ENST00000465143	NHSL1	Q5SYE7	1610 aa		10.72	□□□□□ -0.69
ITSN1-223	ENST00000465143	POTEF	A5A3E0	1075 aa		10.71	□□□□□ -0.69
ITSN1-223	ENST00000465143	MAP3K13	O43283	966 aa		10.71	□□□□□ -0.69
ITSN1-223	ENST00000465143	ATP7B	P35670	1465 aa		10.71	□□□□□ -0.69
ITSN1-223	ENST00000465143	TRPM1	Q7Z4N2	1603 aa		10.71	□□□□□ -0.69
ITSN1-223	ENST00000465143	RASEF	Q8IZ41	740 aa		10.71	□□□□□ -0.69
ITSN1-223	ENST00000465143	QTRT2	Q9H974	415 aa	Known RBP	10.71	□□□□□ -0.69
ITSN1-223	ENST00000465143	BMP2K	Q9NSY1	1161 aa	Predicted RBP	10.71	□□□□□ -0.69
ITSN1-223	ENST00000465143	FMN2	Q9NZ56	1722 aa		10.71	□□□□□ -0.69
ITSN1-223	ENST00000465143	KIAA1210	Q9ULL0	1709 aa		10.71	□□□□□ -0.69
ITSN1-223	ENST00000465143	PPIP5K1	Q6PFW1	1433 aa		10.7	□□□□□ -0.7
ITSN1-223	ENST00000465143	KIF1A	Q12756	1690 aa		10.69	□□□□□ -0.7
ITSN1-223	ENST00000465143	ATAD2	Q6PL18	1390 aa		10.69	□□□□□ -0.7
ITSN1-223	ENST00000465143	ST20-MTHFS	A0A0A6YYL1	179 aa		10.69	□□□□□ -0.7
ITSN1-223	ENST00000465143	SLC24A1	O60721	1099 aa		10.69	□□□□□ -0.7
ITSN1-223	ENST00000465143	HSPA5	P11021	654 aa	Known RBP	10.69	□□□□□ -0.7
ITSN1-223	ENST00000465143	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.69	□□□□□ -0.7
ITSN1-223	ENST00000465143	NUTM2G	Q5VZR2	741 aa		10.69	□□□□□ -0.7
ITSN1-223	ENST00000465143	FNBP4	Q8N3X1	1017 aa	Predicted RBP	10.69	□□□□□ -0.7
ITSN1-223	ENST00000465143	ABTB2	Q8N961	1025 aa		10.69	□□□□□ -0.7
ITSN1-223	ENST00000465143	TMC1	Q8TDI8	760 aa		10.69	□□□□□ -0.7
ITSN1-223	ENST00000465143	TRPC5	Q9UL62	973 aa	Predicted RBP	10.69	□□□□□ -0.7
ITSN1-223	ENST00000465143	SHPRH	Q149N8	1683 aa		10.69	□□□□□ -0.7
ITSN1-223	ENST00000465143	POLR3A	O14802	1390 aa	Predicted RBP	10.68	□□□□□ -0.7
ITSN1-223	ENST00000465143	FAM163A	Q96GL9	167 aa	Predicted RBP	10.68	□□□□□ -0.7
ITSN1-223	ENST00000465143	ARHGEF28	Q8N1W1	1705 aa	Known RBP	10.67	□□□□□ -0.7
ITSN1-223	ENST00000465143	RBM6	P78332	1123 aa	Known RBP	10.67	□□□□□ -0.7
ITSN1-223	ENST00000465143	MAMSTR	Q6ZN01	415 aa		10.67	□□□□□ -0.7
ITSN1-223	ENST00000465143	USP47	Q96K76	1375 aa		10.66	□□□□□ -0.7
ITSN1-223	ENST00000465143	SBNO2	Q9Y2G9	1366 aa		10.66	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms