RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 NUTM2GQ5VZR2 741 aa23.95■■□□□ 1.42
VPS52-215ENST00000464425 TMC1Q8TDI8 760 aa23.93■■□□□ 1.42
VPS52-215ENST00000464425 ABTB2Q8N961 1025 aa23.91■■□□□ 1.42
VPS52-215ENST00000464425 ALS2Q96Q42 1657 aa23.9■■□□□ 1.42
VPS52-215ENST00000464425 FNBP4Q8N3X1 1017 aaPredicted RBP23.9■■□□□ 1.42
VPS52-215ENST00000464425 USP21Q9UK80 565 aa23.9■■□□□ 1.42
VPS52-215ENST00000464425 SLC24A1O60721 1099 aa23.89■■□□□ 1.41
VPS52-215ENST00000464425 QTRT2Q9H974 415 aaKnown RBP23.89■■□□□ 1.41
VPS52-215ENST00000464425 USP6P35125 1406 aa23.88■■□□□ 1.41
VPS52-215ENST00000464425 TMF1P82094 1093 aa23.88■■□□□ 1.41
VPS52-215ENST00000464425 ZNF692Q9BU19 519 aaPredicted RBP23.88■■□□□ 1.41
VPS52-215ENST00000464425 SLC12A5Q9H2X9 1139 aa23.88■■□□□ 1.41
VPS52-215ENST00000464425 PUS7Q96PZ0 661 aaKnown RBP23.87■■□□□ 1.41
VPS52-215ENST00000464425 FAM83GA6ND36 823 aa23.85■■□□□ 1.41
VPS52-215ENST00000464425 RXRBP28702 533 aa23.85■■□□□ 1.41
VPS52-215ENST00000464425 BRD4O60885 1362 aaPredicted RBP23.84■■□□□ 1.41
VPS52-215ENST00000464425 CPSF1Q10570 1443 aaKnown RBP23.84■■□□□ 1.41
VPS52-215ENST00000464425 KTN1Q86UP2 1357 aaKnown RBP23.83■■□□□ 1.41
VPS52-215ENST00000464425 NLRP13Q86W25 1043 aa23.83■■□□□ 1.41
VPS52-215ENST00000464425 TTC21BQ7Z4L5 1316 aa23.83■■□□□ 1.4
VPS52-215ENST00000464425 MARF1Q9Y4F3 1742 aaKnown RBP23.82■■□□□ 1.4
VPS52-215ENST00000464425 NLRP6P59044 892 aa23.82■■□□□ 1.4
VPS52-215ENST00000464425 EIF4G2P78344 907 aaKnown RBP eCLIP23.82■■□□□ 1.4
VPS52-215ENST00000464425 TRPC5Q9UL62 973 aaPredicted RBP23.82■■□□□ 1.4
VPS52-215ENST00000464425 SSH2Q76I76 1423 aa23.82■■□□□ 1.4
VPS52-215ENST00000464425 ABCA3Q99758 1704 aa23.81■■□□□ 1.4
VPS52-215ENST00000464425 BCL9LQ86UU0 1499 aa23.81■■□□□ 1.4
VPS52-215ENST00000464425 SOCS7O14512 581 aa23.81■■□□□ 1.4
VPS52-215ENST00000464425 ZEB1P37275 1124 aaPredicted RBP23.81■■□□□ 1.4
VPS52-215ENST00000464425 HDGFL2Q7Z4V5 671 aaPredicted RBP23.81■■□□□ 1.4
VPS52-215ENST00000464425 HSPA5P11021 654 aaKnown RBP23.8■■□□□ 1.4
VPS52-215ENST00000464425 ZC3H6P61129 1189 aaKnown RBP23.8■■□□□ 1.4
VPS52-215ENST00000464425 UNC5CLQ8IV45 518 aa23.8■■□□□ 1.4
VPS52-215ENST00000464425 TERF2IPQ9NYB0 399 aa23.8■■□□□ 1.4
VPS52-215ENST00000464425 RBM6P78332 1123 aaKnown RBP23.79■■□□□ 1.4
VPS52-215ENST00000464425 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.79■■□□□ 1.4
VPS52-215ENST00000464425 CD163L1Q9NR16 1453 aa23.79■■□□□ 1.4
VPS52-215ENST00000464425 CDCA8Q53HL2 280 aa23.78■■□□□ 1.4
VPS52-215ENST00000464425 PRDM11Q9NQV5 511 aa23.78■■□□□ 1.4
VPS52-215ENST00000464425 SLIT2O94813 1529 aa23.78■■□□□ 1.4
VPS52-215ENST00000464425 AKAP12Q02952 1782 aa23.78■■□□□ 1.4
VPS52-215ENST00000464425 USP19O94966 1318 aa23.77■■□□□ 1.4
VPS52-215ENST00000464425 KIAA0232Q92628 1395 aa23.77■■□□□ 1.4
VPS52-215ENST00000464425 GCP02774 474 aa23.76■■□□□ 1.39
VPS52-215ENST00000464425 CHRNA2Q15822 529 aa23.76■■□□□ 1.39
VPS52-215ENST00000464425 BTG4Q9NY30 223 aa23.76■■□□□ 1.39
VPS52-215ENST00000464425 TTC21AQ8NDW8 1320 aa23.76■■□□□ 1.39
VPS52-215ENST00000464425 A0A1W2PP64 1363 aa23.76■■□□□ 1.39
VPS52-215ENST00000464425 CRYBG1Q9Y4K1 1723 aa23.76■■□□□ 1.39
VPS52-215ENST00000464425 ATRNO75882 1429 aa23.76■■□□□ 1.39
VPS52-215ENST00000464425 ZRANB1Q9UGI0 708 aa23.74■■□□□ 1.39
VPS52-215ENST00000464425 NINLQ9Y2I6 1382 aa23.74■■□□□ 1.39
VPS52-215ENST00000464425 NME9Q86XW9 330 aa23.73■■□□□ 1.39
VPS52-215ENST00000464425 POLR3GLQ9BT43 218 aa23.73■■□□□ 1.39
VPS52-215ENST00000464425 SOX12O15370 315 aa23.72■■□□□ 1.39
VPS52-215ENST00000464425 GJD4Q96KN9 370 aaPredicted RBP23.72■■□□□ 1.39
VPS52-215ENST00000464425 CCDC9Q9Y3X0 531 aaKnown RBP23.72■■□□□ 1.39
VPS52-215ENST00000464425 PHRF1Q9P1Y6 1649 aaKnown RBP23.72■■□□□ 1.39
VPS52-215ENST00000464425 PIK3C2AO00443 1686 aa23.71■■□□□ 1.39
VPS52-215ENST00000464425 ZBTB7CA1YPR0 619 aa23.71■■□□□ 1.39
VPS52-215ENST00000464425 MON2Q7Z3U7 1717 aa23.7■■□□□ 1.39
VPS52-215ENST00000464425 PLCH1Q4KWH8 1693 aa23.7■■□□□ 1.38
VPS52-215ENST00000464425 EDC4Q6P2E9 1401 aaKnown RBP23.69■■□□□ 1.38
VPS52-215ENST00000464425 VPS72Q15906 364 aa23.69■■□□□ 1.38
VPS52-215ENST00000464425 NRKQ7Z2Y5 1582 aa23.69■■□□□ 1.38
VPS52-215ENST00000464425 COL14A1Q05707 1796 aaKnown RBP23.68■■□□□ 1.38
VPS52-215ENST00000464425 ANKRD36BQ8N2N9 1353 aa23.67■■□□□ 1.38
VPS52-215ENST00000464425 CPDO75976 1380 aa23.66■■□□□ 1.38
VPS52-215ENST00000464425 STRN4Q9NRL3 753 aa23.66■■□□□ 1.38
VPS52-215ENST00000464425 NWD2Q9ULI1 1742 aa23.66■■□□□ 1.38
VPS52-215ENST00000464425 CDK12Q9NYV4 1490 aaPredicted RBP23.66■■□□□ 1.38
VPS52-215ENST00000464425 RGS12O14924 1447 aa23.66■■□□□ 1.38
VPS52-215ENST00000464425 SLIT3O75094 1523 aa23.65■■□□□ 1.38
VPS52-215ENST00000464425 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.65■■□□□ 1.38
VPS52-215ENST00000464425 KCNH5Q8NCM2 988 aa23.65■■□□□ 1.38
VPS52-215ENST00000464425 USP31Q70CQ4 1352 aa23.65■■□□□ 1.38
VPS52-215ENST00000464425 EVA1CP58658 441 aa23.64■■□□□ 1.37
VPS52-215ENST00000464425 C11orf95C9JLR9 678 aaPredicted RBP23.63■■□□□ 1.37
VPS52-215ENST00000464425 ARHGEF25Q86VW2 580 aa23.61■■□□□ 1.37
VPS52-215ENST00000464425 NRAPQ86VF7 1730 aa23.61■■□□□ 1.37
VPS52-215ENST00000464425 GLI3P10071 1580 aa23.61■■□□□ 1.37
VPS52-215ENST00000464425 CARD14Q9BXL6 1004 aa23.6■■□□□ 1.37
VPS52-215ENST00000464425 CAMTA1Q9Y6Y1 1673 aa23.6■■□□□ 1.37
VPS52-215ENST00000464425 SPATA31A5Q5VU36 1347 aa23.59■■□□□ 1.37
VPS52-215ENST00000464425 SPATA31A7Q8IWB4 1347 aa23.59■■□□□ 1.37
VPS52-215ENST00000464425 AATKQ6ZMQ8 1374 aa23.58■■□□□ 1.37
VPS52-215ENST00000464425 FAM98CQ17RN3 349 aaKnown RBP23.58■■□□□ 1.37
VPS52-215ENST00000464425 LARP1Q6PKG0 1096 aaKnown RBP23.58■■□□□ 1.37
VPS52-215ENST00000464425 COG3Q96JB2 828 aa23.58■■□□□ 1.37
VPS52-215ENST00000464425 FYB1O15117 783 aa23.57■■□□□ 1.36
VPS52-215ENST00000464425 SEPT12Q8IYM1 358 aa23.57■■□□□ 1.36
VPS52-215ENST00000464425 GGNBP2Q9H3C7 697 aa23.57■■□□□ 1.36
VPS52-215ENST00000464425 USP35Q9P2H5 1018 aa23.57■■□□□ 1.36
VPS52-215ENST00000464425 AXIN2Q9Y2T1 843 aa23.57■■□□□ 1.36
VPS52-215ENST00000464425 A0A0G2JS52 829 aa23.56■■□□□ 1.36
VPS52-215ENST00000464425 MYT1Q01538 1121 aa23.56■■□□□ 1.36
VPS52-215ENST00000464425 MYOM1P52179 1685 aa23.55■■□□□ 1.36
VPS52-215ENST00000464425 OVOS2A0A0J9YW53 1432 aa23.55■■□□□ 1.36
VPS52-215ENST00000464425 OVOS2Q6IE36 1432 aa23.55■■□□□ 1.36
VPS52-215ENST00000464425 SPATA31A1Q5TZJ5 1347 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms