RNA–Protein interactions for RNA: ENST00000464045.1

THUMPD3-208, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-208ENST00000464045 CARD11Q9BXL7 1154 aa10.57□□□□□ -0.72
THUMPD3-208ENST00000464045 RGPD8O14715 1765 aaPredicted RBP10.57□□□□□ -0.72
THUMPD3-208ENST00000464045 EVC2Q86UK5 1308 aa10.57□□□□□ -0.72
THUMPD3-208ENST00000464045 QRICH2Q9H0J4 1663 aa10.57□□□□□ -0.72
THUMPD3-208ENST00000464045 SRPK2P78362 688 aaKnown RBP10.56□□□□□ -0.72
THUMPD3-208ENST00000464045 TOPAZ1Q8N9V7 1692 aa10.56□□□□□ -0.72
THUMPD3-208ENST00000464045 TRPC5Q9UL62 973 aaPredicted RBP10.55□□□□□ -0.72
THUMPD3-208ENST00000464045 BRD4O60885 1362 aaPredicted RBP10.54□□□□□ -0.72
THUMPD3-208ENST00000464045 SLC24A1O60721 1099 aa10.54□□□□□ -0.72
THUMPD3-208ENST00000464045 FNBP4Q8N3X1 1017 aaPredicted RBP10.54□□□□□ -0.72
THUMPD3-208ENST00000464045 TRPM3Q9HCF6 1732 aaPredicted RBP10.54□□□□□ -0.72
THUMPD3-208ENST00000464045 PPIP5K1Q6PFW1 1433 aa10.53□□□□□ -0.72
THUMPD3-208ENST00000464045 CABP2Q9NPB3 220 aa10.53□□□□□ -0.72
THUMPD3-208ENST00000464045 ACEP12821 1306 aa10.53□□□□□ -0.72
THUMPD3-208ENST00000464045 ATAD2Q6PL18 1390 aa10.52□□□□□ -0.72
THUMPD3-208ENST00000464045 LMOD2Q6P5Q4 547 aa10.52□□□□□ -0.73
THUMPD3-208ENST00000464045 ALS2Q96Q42 1657 aa10.52□□□□□ -0.73
THUMPD3-208ENST00000464045 HAP1P54257 671 aaPredicted RBP10.51□□□□□ -0.73
THUMPD3-208ENST00000464045 CCER1Q8TC90 406 aaPredicted RBP10.51□□□□□ -0.73
THUMPD3-208ENST00000464045 PUS7Q96PZ0 661 aaKnown RBP10.51□□□□□ -0.73
THUMPD3-208ENST00000464045 ATRNO75882 1429 aa10.5□□□□□ -0.73
THUMPD3-208ENST00000464045 PAK3O75914 559 aaPredicted RBP10.5□□□□□ -0.73
THUMPD3-208ENST00000464045 CABLES1Q8TDN4 633 aa10.5□□□□□ -0.73
THUMPD3-208ENST00000464045 CABP1Q9NZU7 370 aa10.5□□□□□ -0.73
THUMPD3-208ENST00000464045 MARF1Q9Y4F3 1742 aaKnown RBP10.5□□□□□ -0.73
THUMPD3-208ENST00000464045 SLIT2O94813 1529 aa10.49□□□□□ -0.73
THUMPD3-208ENST00000464045 C1QBPQ07021 282 aaKnown RBP10.49□□□□□ -0.73
THUMPD3-208ENST00000464045 ZNF692Q9BU19 519 aaPredicted RBP10.49□□□□□ -0.73
THUMPD3-208ENST00000464045 USP6P35125 1406 aa10.49□□□□□ -0.73
THUMPD3-208ENST00000464045 BCL9LQ86UU0 1499 aa10.49□□□□□ -0.73
THUMPD3-208ENST00000464045 ABCA3Q99758 1704 aa10.48□□□□□ -0.73
THUMPD3-208ENST00000464045 UNC5CLQ8IV45 518 aa10.48□□□□□ -0.73
THUMPD3-208ENST00000464045 GJD4Q96KN9 370 aaPredicted RBP10.48□□□□□ -0.73
THUMPD3-208ENST00000464045 CCDC9Q9Y3X0 531 aaKnown RBP10.48□□□□□ -0.73
THUMPD3-208ENST00000464045 ST20-MTHFSA0A0A6YYL1 179 aa10.47□□□□□ -0.73
THUMPD3-208ENST00000464045 ABTB2Q8N961 1025 aa10.47□□□□□ -0.73
THUMPD3-208ENST00000464045 TESK2Q96S53 571 aa10.47□□□□□ -0.73
THUMPD3-208ENST00000464045 ZRANB1Q9UGI0 708 aa10.47□□□□□ -0.73
THUMPD3-208ENST00000464045 USP47Q96K76 1375 aa10.47□□□□□ -0.73
THUMPD3-208ENST00000464045 NINLQ9Y2I6 1382 aa10.47□□□□□ -0.73
THUMPD3-208ENST00000464045 CPSF1Q10570 1443 aaKnown RBP10.47□□□□□ -0.73
THUMPD3-208ENST00000464045 SSH2Q76I76 1423 aa10.47□□□□□ -0.73
THUMPD3-208ENST00000464045 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.47□□□□□ -0.73
THUMPD3-208ENST00000464045 A0A0G2JS52 829 aa10.46□□□□□ -0.73
THUMPD3-208ENST00000464045 MYT1Q01538 1121 aa10.46□□□□□ -0.73
THUMPD3-208ENST00000464045 DEFB132Q7Z7B7 95 aa10.46□□□□□ -0.73
THUMPD3-208ENST00000464045 NLRP13Q86W25 1043 aa10.46□□□□□ -0.73
THUMPD3-208ENST00000464045 USP19O94966 1318 aa10.46□□□□□ -0.73
THUMPD3-208ENST00000464045 CRYBG1Q9Y4K1 1723 aa10.46□□□□□ -0.74
THUMPD3-208ENST00000464045 NWD2Q9ULI1 1742 aa10.45□□□□□ -0.74
THUMPD3-208ENST00000464045 TTC21AQ8NDW8 1320 aa10.45□□□□□ -0.74
THUMPD3-208ENST00000464045 FAM83GA6ND36 823 aa10.45□□□□□ -0.74
THUMPD3-208ENST00000464045 CPDO75976 1380 aa10.44□□□□□ -0.74
THUMPD3-208ENST00000464045 VPS72Q15906 364 aa10.44□□□□□ -0.74
THUMPD3-208ENST00000464045 BRWD3Q6RI45 1802 aa10.44□□□□□ -0.74
THUMPD3-208ENST00000464045 COL14A1Q05707 1796 aaKnown RBP10.44□□□□□ -0.74
THUMPD3-208ENST00000464045 GLI3P10071 1580 aa10.43□□□□□ -0.74
THUMPD3-208ENST00000464045 KTN1Q86UP2 1357 aaKnown RBP10.43□□□□□ -0.74
THUMPD3-208ENST00000464045 TTC21BQ7Z4L5 1316 aa10.43□□□□□ -0.74
THUMPD3-208ENST00000464045 TMF1P82094 1093 aa10.43□□□□□ -0.74
THUMPD3-208ENST00000464045 CDCA8Q53HL2 280 aa10.43□□□□□ -0.74
THUMPD3-208ENST00000464045 HDGFL2Q7Z4V5 671 aaPredicted RBP10.43□□□□□ -0.74
THUMPD3-208ENST00000464045 SEPT12Q8IYM1 358 aa10.43□□□□□ -0.74
THUMPD3-208ENST00000464045 PRDM11Q9NQV5 511 aa10.43□□□□□ -0.74
THUMPD3-208ENST00000464045 TERF2IPQ9NYB0 399 aa10.43□□□□□ -0.74
THUMPD3-208ENST00000464045 PLCH1Q4KWH8 1693 aa10.43□□□□□ -0.74
THUMPD3-208ENST00000464045 PHRF1Q9P1Y6 1649 aaKnown RBP10.43□□□□□ -0.74
THUMPD3-208ENST00000464045 CD163L1Q9NR16 1453 aa10.42□□□□□ -0.74
THUMPD3-208ENST00000464045 AKAP12Q02952 1782 aa10.42□□□□□ -0.74
THUMPD3-208ENST00000464045 KIAA0232Q92628 1395 aa10.42□□□□□ -0.74
THUMPD3-208ENST00000464045 GCP02774 474 aa10.42□□□□□ -0.74
THUMPD3-208ENST00000464045 NUTM2GQ5VZR2 741 aa10.42□□□□□ -0.74
THUMPD3-208ENST00000464045 BTG4Q9NY30 223 aa10.42□□□□□ -0.74
THUMPD3-208ENST00000464045 NRKQ7Z2Y5 1582 aa10.42□□□□□ -0.74
THUMPD3-208ENST00000464045 SLIT3O75094 1523 aa10.42□□□□□ -0.74
THUMPD3-208ENST00000464045 EDC4Q6P2E9 1401 aaKnown RBP10.41□□□□□ -0.74
THUMPD3-208ENST00000464045 NLRP6P59044 892 aa10.41□□□□□ -0.74
THUMPD3-208ENST00000464045 FAM182BQ5T319 152 aa10.41□□□□□ -0.74
THUMPD3-208ENST00000464045 TMC1Q8TDI8 760 aa10.41□□□□□ -0.74
THUMPD3-208ENST00000464045 ONECUT3O60422 494 aaPredicted RBP10.4□□□□□ -0.74
THUMPD3-208ENST00000464045 ZC3H6P61129 1189 aaKnown RBP10.4□□□□□ -0.74
THUMPD3-208ENST00000464045 SF3B2Q13435 895 aaKnown RBP10.4□□□□□ -0.74
THUMPD3-208ENST00000464045 KCNH5Q8NCM2 988 aa10.4□□□□□ -0.74
THUMPD3-208ENST00000464045 SLC12A5Q9H2X9 1139 aa10.4□□□□□ -0.74
THUMPD3-208ENST00000464045 MON2Q7Z3U7 1717 aa10.4□□□□□ -0.74
THUMPD3-208ENST00000464045 NRAPQ86VF7 1730 aa10.4□□□□□ -0.74
THUMPD3-208ENST00000464045 PIK3C2AO00443 1686 aa10.4□□□□□ -0.74
THUMPD3-208ENST00000464045 A0A1W2PP64 1363 aa10.39□□□□□ -0.75
THUMPD3-208ENST00000464045 USP31Q70CQ4 1352 aa10.39□□□□□ -0.75
THUMPD3-208ENST00000464045 PSDA5PKW4 1024 aaPredicted RBP10.39□□□□□ -0.75
THUMPD3-208ENST00000464045 FAM98CQ17RN3 349 aaKnown RBP10.39□□□□□ -0.75
THUMPD3-208ENST00000464045 AATKQ6ZMQ8 1374 aa10.39□□□□□ -0.75
THUMPD3-208ENST00000464045 ANKRD36BQ8N2N9 1353 aa10.39□□□□□ -0.75
THUMPD3-208ENST00000464045 EIF4G2P78344 907 aaKnown RBP eCLIP10.38□□□□□ -0.75
THUMPD3-208ENST00000464045 KRT27Q7Z3Y8 459 aa10.38□□□□□ -0.75
THUMPD3-208ENST00000464045 CCDC125Q86Z20 511 aa10.38□□□□□ -0.75
THUMPD3-208ENST00000464045 BLMP54132 1417 aaPredicted RBP10.38□□□□□ -0.75
THUMPD3-208ENST00000464045 SPATA31A5Q5VU36 1347 aa10.37□□□□□ -0.75
THUMPD3-208ENST00000464045 SPATA31A7Q8IWB4 1347 aa10.37□□□□□ -0.75
THUMPD3-208ENST00000464045 CHRNA2Q15822 529 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms