RNA–Protein interactions for RNA: ENST00000464025.5

LMO2-204, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-204ENST00000464025 NUDT16Q96DE0 195 aaKnown RBP22.77■■□□□ 1.24
LMO2-204ENST00000464025 MAP2P11137 1827 aaKnown RBP22.77■■□□□ 1.24
LMO2-204ENST00000464025 ITSN1Q15811 1721 aa22.77■■□□□ 1.24
LMO2-204ENST00000464025 TCERG1O14776 1098 aaKnown RBP22.76■■□□□ 1.23
LMO2-204ENST00000464025 LTKP29376 864 aa22.76■■□□□ 1.23
LMO2-204ENST00000464025 AATKQ6ZMQ8 1374 aa22.75■■□□□ 1.23
LMO2-204ENST00000464025 ROBO2Q9HCK4 1378 aa22.75■■□□□ 1.23
LMO2-204ENST00000464025 DIAPH1O60610 1272 aaKnown RBP22.75■■□□□ 1.23
LMO2-204ENST00000464025 ZNF692Q9BU19 519 aaPredicted RBP22.75■■□□□ 1.23
LMO2-204ENST00000464025 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.74■■□□□ 1.23
LMO2-204ENST00000464025 DIP2AQ14689 1571 aa22.74■■□□□ 1.23
LMO2-204ENST00000464025 PDE3AQ14432 1141 aa22.74■■□□□ 1.23
LMO2-204ENST00000464025 TOPAZ1Q8N9V7 1692 aa22.74■■□□□ 1.23
LMO2-204ENST00000464025 EID1Q9Y6B2 187 aa22.73■■□□□ 1.23
LMO2-204ENST00000464025 CT47B1P0C2W7 299 aaPredicted RBP22.72■■□□□ 1.23
LMO2-204ENST00000464025 MS4A1P11836 297 aa22.72■■□□□ 1.23
LMO2-204ENST00000464025 MYH16Q9H6N6 1097 aa22.72■■□□□ 1.23
LMO2-204ENST00000464025 RRP7AQ9Y3A4 280 aaKnown RBP22.72■■□□□ 1.23
LMO2-204ENST00000464025 POLKQ9UBT6 870 aa22.72■■□□□ 1.23
LMO2-204ENST00000464025 TBX22Q9Y458 520 aa22.72■■□□□ 1.23
LMO2-204ENST00000464025 IL16Q14005 1332 aa22.71■■□□□ 1.23
LMO2-204ENST00000464025 KDM2BQ8NHM5 1336 aa22.71■■□□□ 1.23
LMO2-204ENST00000464025 BCAR3O75815 825 aa22.7■■□□□ 1.22
LMO2-204ENST00000464025 FCHSD2O94868 740 aa22.7■■□□□ 1.22
LMO2-204ENST00000464025 TMPOP42166 694 aaKnown RBP22.7■■□□□ 1.22
LMO2-204ENST00000464025 CEBPAP49715 358 aaPredicted RBP22.7■■□□□ 1.22
LMO2-204ENST00000464025 NEUROD2Q15784 382 aa22.7■■□□□ 1.22
LMO2-204ENST00000464025 CDK12Q9NYV4 1490 aaPredicted RBP22.69■■□□□ 1.22
LMO2-204ENST00000464025 U2SURPO15042 1029 aaKnown RBP22.69■■□□□ 1.22
LMO2-204ENST00000464025 PTCH1Q13635 1447 aa22.69■■□□□ 1.22
LMO2-204ENST00000464025 PTPRUQ92729 1446 aa22.69■■□□□ 1.22
LMO2-204ENST00000464025 PRR36Q9H6K5 1346 aa22.68■■□□□ 1.22
LMO2-204ENST00000464025 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.68■■□□□ 1.22
LMO2-204ENST00000464025 THEMISQ8N1K5 641 aaPredicted RBP22.68■■□□□ 1.22
LMO2-204ENST00000464025 MAPK8IP3Q9UPT6 1336 aa22.68■■□□□ 1.22
LMO2-204ENST00000464025 PLEKHG3A1L390 1219 aa22.67■■□□□ 1.22
LMO2-204ENST00000464025 CENPQQ7L2Z9 268 aaPredicted RBP22.67■■□□□ 1.22
LMO2-204ENST00000464025 NRKQ7Z2Y5 1582 aa22.67■■□□□ 1.22
LMO2-204ENST00000464025 RARSP54136 660 aaKnown RBP22.67■■□□□ 1.22
LMO2-204ENST00000464025 AAMPQ13685 434 aa22.67■■□□□ 1.22
LMO2-204ENST00000464025 TRIM35Q9UPQ4 493 aa22.65■■□□□ 1.22
LMO2-204ENST00000464025 NME9Q86XW9 330 aa22.63■■□□□ 1.21
LMO2-204ENST00000464025 COG3Q96JB2 828 aa22.63■■□□□ 1.21
LMO2-204ENST00000464025 LRRC7Q96NW7 1537 aa22.63■■□□□ 1.21
LMO2-204ENST00000464025 XRN1Q8IZH2 1706 aaKnown RBP22.62■■□□□ 1.21
LMO2-204ENST00000464025 RSPH6AQ9H0K4 717 aa22.62■■□□□ 1.21
LMO2-204ENST00000464025 RIMS1Q86UR5 1692 aaKnown RBP22.61■■□□□ 1.21
LMO2-204ENST00000464025 PIK3R4Q99570 1358 aa22.6■■□□□ 1.21
LMO2-204ENST00000464025 IL13P35225 146 aa22.6■■□□□ 1.21
LMO2-204ENST00000464025 AMOTL2Q9Y2J4 779 aa22.59■■□□□ 1.21
LMO2-204ENST00000464025 NCKAP5LQ9HCH0 1330 aa22.59■■□□□ 1.21
LMO2-204ENST00000464025 NALCNQ8IZF0 1738 aa22.59■■□□□ 1.21
LMO2-204ENST00000464025 SLC26A8Q96RN1 970 aa22.59■■□□□ 1.21
LMO2-204ENST00000464025 CEP170BQ9Y4F5 1589 aaPredicted RBP22.58■■□□□ 1.21
LMO2-204ENST00000464025 MSH5O43196 834 aa22.58■■□□□ 1.2
LMO2-204ENST00000464025 RIPK4P57078 832 aa22.58■■□□□ 1.2
LMO2-204ENST00000464025 USP6P35125 1406 aa22.58■■□□□ 1.2
LMO2-204ENST00000464025 SSH2Q76I76 1423 aa22.58■■□□□ 1.2
LMO2-204ENST00000464025 TTC21BQ7Z4L5 1316 aa22.57■■□□□ 1.2
LMO2-204ENST00000464025 OVOS2A0A0J9YW53 1432 aa22.57■■□□□ 1.2
LMO2-204ENST00000464025 OVOS2Q6IE36 1432 aa22.57■■□□□ 1.2
LMO2-204ENST00000464025 NEFMP07197 916 aa22.56■■□□□ 1.2
LMO2-204ENST00000464025 MYT1Q01538 1121 aa22.56■■□□□ 1.2
LMO2-204ENST00000464025 EMILIN1Q9Y6C2 1016 aa22.56■■□□□ 1.2
LMO2-204ENST00000464025 ACEP12821 1306 aa22.56■■□□□ 1.2
LMO2-204ENST00000464025 TRHP20396 242 aaPredicted RBP22.55■■□□□ 1.2
LMO2-204ENST00000464025 ANP32EQ9BTT0 268 aa22.55■■□□□ 1.2
LMO2-204ENST00000464025 CANXP27824 592 aaKnown RBP22.55■■□□□ 1.2
LMO2-204ENST00000464025 BACH2Q9BYV9 841 aa22.55■■□□□ 1.2
LMO2-204ENST00000464025 ZRANB1Q9UGI0 708 aa22.55■■□□□ 1.2
LMO2-204ENST00000464025 PDE4AP27815 886 aa22.54■■□□□ 1.2
LMO2-204ENST00000464025 PRKAR2BP31323 418 aa22.54■■□□□ 1.2
LMO2-204ENST00000464025 USP31Q70CQ4 1352 aa22.53■■□□□ 1.2
LMO2-204ENST00000464025 FBLN1P23142 703 aa22.53■■□□□ 1.2
LMO2-204ENST00000464025 NFE2L2Q16236 605 aa22.53■■□□□ 1.2
LMO2-204ENST00000464025 CLUAP1Q96AJ1 413 aa22.53■■□□□ 1.2
LMO2-204ENST00000464025 ZNF142P52746 1687 aaPredicted RBP22.53■■□□□ 1.2
LMO2-204ENST00000464025 PPM1GO15355 546 aaPredicted RBP22.52■■□□□ 1.2
LMO2-204ENST00000464025 TTC21AQ8NDW8 1320 aa22.52■■□□□ 1.2
LMO2-204ENST00000464025 ANKARQ7Z5J8 1434 aa22.52■■□□□ 1.2
LMO2-204ENST00000464025 CALD1Q05682 793 aaKnown RBP22.51■■□□□ 1.19
LMO2-204ENST00000464025 PANK1Q8TE04 598 aa22.5■■□□□ 1.19
LMO2-204ENST00000464025 ZNF428Q96B54 188 aa22.5■■□□□ 1.19
LMO2-204ENST00000464025 SETD1BQ9UPS6 1966 aaKnown RBP22.5■■□□□ 1.19
LMO2-204ENST00000464025 EXOSC9Q06265 439 aaKnown RBP22.5■■□□□ 1.19
LMO2-204ENST00000464025 ZKSCAN2Q63HK3 967 aa22.49■■□□□ 1.19
LMO2-204ENST00000464025 FRAT1Q92837 279 aaPredicted RBP22.49■■□□□ 1.19
LMO2-204ENST00000464025 COG6Q9Y2V7 657 aa22.49■■□□□ 1.19
LMO2-204ENST00000464025 ADAMTSL3P82987 1691 aa22.49■■□□□ 1.19
LMO2-204ENST00000464025 DLG5Q8TDM6 1919 aa22.48■■□□□ 1.19
LMO2-204ENST00000464025 TSR2Q969E8 191 aaKnown RBP22.48■■□□□ 1.19
LMO2-204ENST00000464025 RGPD8O14715 1765 aaPredicted RBP22.48■■□□□ 1.19
LMO2-204ENST00000464025 ANP32AP39687 249 aaKnown RBP22.47■■□□□ 1.19
LMO2-204ENST00000464025 CHD2O14647 1828 aaKnown RBP22.47■■□□□ 1.19
LMO2-204ENST00000464025 FMN2Q9NZ56 1722 aa22.47■■□□□ 1.19
LMO2-204ENST00000464025 BRPF1P55201 1214 aaPredicted RBP22.46■■□□□ 1.19
LMO2-204ENST00000464025 LMOD3Q0VAK6 560 aa22.46■■□□□ 1.19
LMO2-204ENST00000464025 ALDH1L2Q3SY69 923 aa22.46■■□□□ 1.19
LMO2-204ENST00000464025 RRS1Q15050 365 aaKnown RBP22.46■■□□□ 1.19
LMO2-204ENST00000464025 PHACTR3Q96KR7 559 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms