RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 SPATA31A6Q5VVP1 1343 aa26.37■■□□□ 1.81
LMNB1-204ENST00000463908 NINLQ9Y2I6 1382 aa26.35■■□□□ 1.81
LMNB1-204ENST00000463908 POLR3GLQ9BT43 218 aa26.35■■□□□ 1.81
LMNB1-204ENST00000463908 TERF2IPQ9NYB0 399 aa26.35■■□□□ 1.81
LMNB1-204ENST00000463908 KTN1Q86UP2 1357 aaKnown RBP26.34■■□□□ 1.81
LMNB1-204ENST00000463908 NUTM2BA6NNL0 878 aaPredicted RBP26.34■■□□□ 1.81
LMNB1-204ENST00000463908 NUTM2EB1AL46 878 aaPredicted RBP26.34■■□□□ 1.81
LMNB1-204ENST00000463908 HDGFL2Q7Z4V5 671 aaPredicted RBP26.34■■□□□ 1.81
LMNB1-204ENST00000463908 NUTM2AQ8IVF1 878 aaPredicted RBP26.34■■□□□ 1.81
LMNB1-204ENST00000463908 A0A1W2PP64 1363 aa26.33■■□□□ 1.81
LMNB1-204ENST00000463908 TTC21BQ7Z4L5 1316 aa26.33■■□□□ 1.81
LMNB1-204ENST00000463908 ARHGEF10O15013 1369 aa26.33■■□□□ 1.8
LMNB1-204ENST00000463908 BRD4O60885 1362 aaPredicted RBP26.33■■□□□ 1.8
LMNB1-204ENST00000463908 CABLES1Q8TDN4 633 aa26.32■■□□□ 1.8
LMNB1-204ENST00000463908 AKAP12Q02952 1782 aa26.32■■□□□ 1.8
LMNB1-204ENST00000463908 KIF7Q2M1P5 1343 aa26.32■■□□□ 1.8
LMNB1-204ENST00000463908 ALS2Q96Q42 1657 aa26.31■■□□□ 1.8
LMNB1-204ENST00000463908 NUTM2GQ5VZR2 741 aa26.31■■□□□ 1.8
LMNB1-204ENST00000463908 ABTB2Q8N961 1025 aa26.31■■□□□ 1.8
LMNB1-204ENST00000463908 COL22A1Q8NFW1 1626 aaPredicted RBP26.31■■□□□ 1.8
LMNB1-204ENST00000463908 LRP6O75581 1613 aa26.3■■□□□ 1.8
LMNB1-204ENST00000463908 PLEKHG5O94827 1062 aa26.29■■□□□ 1.8
LMNB1-204ENST00000463908 ANKRD36BQ8N2N9 1353 aa26.29■■□□□ 1.8
LMNB1-204ENST00000463908 CARD14Q9BXL6 1004 aa26.28■■□□□ 1.8
LMNB1-204ENST00000463908 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.27■■□□□ 1.8
LMNB1-204ENST00000463908 MYOM1P52179 1685 aa26.26■■□□□ 1.79
LMNB1-204ENST00000463908 WASHC2AQ641Q2 1341 aa26.26■■□□□ 1.79
LMNB1-204ENST00000463908 TTC21AQ8NDW8 1320 aa26.25■■□□□ 1.79
LMNB1-204ENST00000463908 MON2Q7Z3U7 1717 aa26.25■■□□□ 1.79
LMNB1-204ENST00000463908 ADAMTS2O95450 1211 aa26.24■■□□□ 1.79
LMNB1-204ENST00000463908 ZRANB1Q9UGI0 708 aa26.24■■□□□ 1.79
LMNB1-204ENST00000463908 EDC4Q6P2E9 1401 aaKnown RBP26.23■■□□□ 1.79
LMNB1-204ENST00000463908 CCDC7Q96M83 1385 aa26.23■■□□□ 1.79
LMNB1-204ENST00000463908 NLRP6P59044 892 aa26.23■■□□□ 1.79
LMNB1-204ENST00000463908 NRKQ7Z2Y5 1582 aa26.23■■□□□ 1.79
LMNB1-204ENST00000463908 NLRP13Q86W25 1043 aa26.22■■□□□ 1.79
LMNB1-204ENST00000463908 NME9Q86XW9 330 aa26.22■■□□□ 1.79
LMNB1-204ENST00000463908 PANK3Q9H999 370 aa26.22■■□□□ 1.79
LMNB1-204ENST00000463908 USP19O94966 1318 aa26.19■■□□□ 1.78
LMNB1-204ENST00000463908 PIK3C2AO00443 1686 aa26.19■■□□□ 1.78
LMNB1-204ENST00000463908 MEX3CQ5U5Q3 659 aaKnown RBP26.18■■□□□ 1.78
LMNB1-204ENST00000463908 USP31Q70CQ4 1352 aa26.18■■□□□ 1.78
LMNB1-204ENST00000463908 HAP1P54257 671 aaPredicted RBP26.17■■□□□ 1.78
LMNB1-204ENST00000463908 FYB1O15117 783 aa26.16■■□□□ 1.78
LMNB1-204ENST00000463908 GCP02774 474 aa26.16■■□□□ 1.78
LMNB1-204ENST00000463908 C8orf37Q96NL8 207 aa26.16■■□□□ 1.78
LMNB1-204ENST00000463908 CRYBG1Q9Y4K1 1723 aa26.16■■□□□ 1.78
LMNB1-204ENST00000463908 FAM83GA6ND36 823 aa26.14■■□□□ 1.78
LMNB1-204ENST00000463908 ABCA3Q99758 1704 aa26.14■■□□□ 1.77
LMNB1-204ENST00000463908 NSD3Q9BZ95 1437 aa26.14■■□□□ 1.77
LMNB1-204ENST00000463908 NGLY1Q96IV0 654 aa26.13■■□□□ 1.77
LMNB1-204ENST00000463908 ZC3H6P61129 1189 aaKnown RBP26.12■■□□□ 1.77
LMNB1-204ENST00000463908 FNBP4Q8N3X1 1017 aaPredicted RBP26.11■■□□□ 1.77
LMNB1-204ENST00000463908 GGNBP2Q9H3C7 697 aa26.11■■□□□ 1.77
LMNB1-204ENST00000463908 MARF1Q9Y4F3 1742 aaKnown RBP26.11■■□□□ 1.77
LMNB1-204ENST00000463908 SLIT3O75094 1523 aa26.1■■□□□ 1.77
LMNB1-204ENST00000463908 PER1O15534 1290 aaPredicted RBP26.09■■□□□ 1.77
LMNB1-204ENST00000463908 PHRF1Q9P1Y6 1649 aaKnown RBP26.09■■□□□ 1.77
LMNB1-204ENST00000463908 AFF2P51816 1311 aa26.09■■□□□ 1.77
LMNB1-204ENST00000463908 OVOS2A0A0J9YW53 1432 aa26.08■■□□□ 1.77
LMNB1-204ENST00000463908 OVOS2Q6IE36 1432 aa26.08■■□□□ 1.77
LMNB1-204ENST00000463908 KIAA0232Q92628 1395 aa26.07■■□□□ 1.76
LMNB1-204ENST00000463908 KCNH5Q8NCM2 988 aa26.07■■□□□ 1.76
LMNB1-204ENST00000463908 SOX12O15370 315 aa26.06■■□□□ 1.76
LMNB1-204ENST00000463908 CHRNA2Q15822 529 aa26.06■■□□□ 1.76
LMNB1-204ENST00000463908 COG3Q96JB2 828 aa26.06■■□□□ 1.76
LMNB1-204ENST00000463908 PRDM11Q9NQV5 511 aa26.05■■□□□ 1.76
LMNB1-204ENST00000463908 CGNL1Q0VF96 1302 aa26.05■■□□□ 1.76
LMNB1-204ENST00000463908 USP54Q70EL1 1684 aa26.05■■□□□ 1.76
LMNB1-204ENST00000463908 CPDO75976 1380 aa26.05■■□□□ 1.76
LMNB1-204ENST00000463908 FBLN1P23142 703 aa26.04■■□□□ 1.76
LMNB1-204ENST00000463908 ARHGEF25Q86VW2 580 aa26.04■■□□□ 1.76
LMNB1-204ENST00000463908 BCL9LQ86UU0 1499 aa26.04■■□□□ 1.76
LMNB1-204ENST00000463908 SLIT2O94813 1529 aa26.04■■□□□ 1.76
LMNB1-204ENST00000463908 USP21Q9UK80 565 aa26.03■■□□□ 1.76
LMNB1-204ENST00000463908 KNSTRNQ9Y448 316 aa26.02■■□□□ 1.76
LMNB1-204ENST00000463908 NFAT5O94916 1531 aa26.01■■□□□ 1.75
LMNB1-204ENST00000463908 ZNF772Q68DY9 489 aaPredicted RBP26.01■■□□□ 1.75
LMNB1-204ENST00000463908 AMER1Q5JTC6 1135 aaPredicted RBP26■■□□□ 1.75
LMNB1-204ENST00000463908 BTG4Q9NY30 223 aa26■■□□□ 1.75
LMNB1-204ENST00000463908 UNC5CLQ8IV45 518 aa25.99■■□□□ 1.75
LMNB1-204ENST00000463908 ZBTB7CA1YPR0 619 aa25.98■■□□□ 1.75
LMNB1-204ENST00000463908 QTRT2Q9H974 415 aaKnown RBP25.98■■□□□ 1.75
LMNB1-204ENST00000463908 UPF1Q92900 1129 aaKnown RBP eCLIP25.97■■□□□ 1.75
LMNB1-204ENST00000463908 AXIN2Q9Y2T1 843 aa25.97■■□□□ 1.75
LMNB1-204ENST00000463908 COL14A1Q05707 1796 aaKnown RBP25.97■■□□□ 1.75
LMNB1-204ENST00000463908 AATKQ6ZMQ8 1374 aa25.96■■□□□ 1.75
LMNB1-204ENST00000463908 KIF20BQ96Q89 1820 aa25.96■■□□□ 1.75
LMNB1-204ENST00000463908 CAMTA1Q9Y6Y1 1673 aa25.94■■□□□ 1.74
LMNB1-204ENST00000463908 CDK12Q9NYV4 1490 aaPredicted RBP25.93■■□□□ 1.74
LMNB1-204ENST00000463908 ZNF316A6NFI3 1004 aaPredicted RBP25.93■■□□□ 1.74
LMNB1-204ENST00000463908 DDX10Q13206 875 aaKnown RBP25.93■■□□□ 1.74
LMNB1-204ENST00000463908 PLCH1Q4KWH8 1693 aa25.93■■□□□ 1.74
LMNB1-204ENST00000463908 RRS1Q15050 365 aaKnown RBP25.92■■□□□ 1.74
LMNB1-204ENST00000463908 TRPC5Q9UL62 973 aaPredicted RBP25.92■■□□□ 1.74
LMNB1-204ENST00000463908 NSD2O96028 1365 aa25.92■■□□□ 1.74
LMNB1-204ENST00000463908 COL18A1P39060 1754 aa25.92■■□□□ 1.74
LMNB1-204ENST00000463908 MAP3K19Q56UN5 1328 aa25.91■■□□□ 1.74
LMNB1-204ENST00000463908 ATRNO75882 1429 aa25.91■■□□□ 1.74
LMNB1-204ENST00000463908 LMO7Q8WWI1 1683 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms