RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 PDE4AP27815 886 aa4.91□□□□□ -1.62
COL8A1-205ENST00000463753 ANP32AP39687 249 aaKnown RBP4.91□□□□□ -1.62
COL8A1-205ENST00000463753 TMEM92Q6UXU6 159 aa4.91□□□□□ -1.62
COL8A1-205ENST00000463753 TET3O43151 1660 aa4.9□□□□□ -1.62
COL8A1-205ENST00000463753 RANGAP1P46060 587 aaPredicted RBP4.9□□□□□ -1.62
COL8A1-205ENST00000463753 CASZ1Q86V15 1759 aa4.9□□□□□ -1.62
COL8A1-205ENST00000463753 CDC42BPBQ9Y5S2 1711 aa4.9□□□□□ -1.62
COL8A1-205ENST00000463753 FOXK1P85037 733 aa4.9□□□□□ -1.63
COL8A1-205ENST00000463753 LHX8Q68G74 356 aa4.9□□□□□ -1.63
COL8A1-205ENST00000463753 PIK3R4Q99570 1358 aa4.9□□□□□ -1.63
COL8A1-205ENST00000463753 TAF7LQ5H9L4 462 aa4.89□□□□□ -1.63
COL8A1-205ENST00000463753 ARID4BQ4LE39 1312 aaPredicted RBP4.89□□□□□ -1.63
COL8A1-205ENST00000463753 C11orf95C9JLR9 678 aaPredicted RBP4.89□□□□□ -1.63
COL8A1-205ENST00000463753 OTUD5Q96G74 571 aa4.89□□□□□ -1.63
COL8A1-205ENST00000463753 NAP1L5Q96NT1 182 aaPredicted RBP4.89□□□□□ -1.63
COL8A1-205ENST00000463753 FYCO1Q9BQS8 1478 aa4.89□□□□□ -1.63
COL8A1-205ENST00000463753 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.89□□□□□ -1.63
COL8A1-205ENST00000463753 KDM2AQ9Y2K7 1162 aa4.89□□□□□ -1.63
COL8A1-205ENST00000463753 ARHGAP31Q2M1Z3 1444 aa4.89□□□□□ -1.63
COL8A1-205ENST00000463753 MAST1Q9Y2H9 1570 aa4.88□□□□□ -1.63
COL8A1-205ENST00000463753 NPM2Q86SE8 214 aaKnown RBP4.88□□□□□ -1.63
COL8A1-205ENST00000463753 RBM33Q96EV2 1170 aaKnown RBP4.88□□□□□ -1.63
COL8A1-205ENST00000463753 NUP153P49790 1475 aaKnown RBP4.88□□□□□ -1.63
COL8A1-205ENST00000463753 ZNF335Q9H4Z2 1342 aaPredicted RBP4.88□□□□□ -1.63
COL8A1-205ENST00000463753 PRELPP51888 382 aa4.88□□□□□ -1.63
COL8A1-205ENST00000463753 HAP1P54257 671 aaPredicted RBP4.88□□□□□ -1.63
COL8A1-205ENST00000463753 IPO9Q96P70 1041 aaKnown RBP4.88□□□□□ -1.63
COL8A1-205ENST00000463753 CHMP4BQ9H444 224 aaKnown RBP4.88□□□□□ -1.63
COL8A1-205ENST00000463753 ARHGAP35Q9NRY4 1499 aa4.88□□□□□ -1.63
COL8A1-205ENST00000463753 ABCC5O15440 1437 aa4.87□□□□□ -1.63
COL8A1-205ENST00000463753 FMN1Q68DA7 1419 aa4.87□□□□□ -1.63
COL8A1-205ENST00000463753 YTHDC2Q9H6S0 1430 aaKnown RBP4.87□□□□□ -1.63
COL8A1-205ENST00000463753 EFCAB6Q5THR3 1501 aa4.87□□□□□ -1.63
COL8A1-205ENST00000463753 G3V3G9 751 aa4.87□□□□□ -1.63
COL8A1-205ENST00000463753 SCUBE2Q9NQ36 999 aa4.87□□□□□ -1.63
COL8A1-205ENST00000463753 HSP90AA1P07900 732 aaKnown RBP4.87□□□□□ -1.63
COL8A1-205ENST00000463753 WASHC2AQ641Q2 1341 aa4.87□□□□□ -1.63
COL8A1-205ENST00000463753 NUP188Q5SRE5 1749 aa4.87□□□□□ -1.63
COL8A1-205ENST00000463753 RGS3P49796 1198 aa4.86□□□□□ -1.63
COL8A1-205ENST00000463753 RBM6P78332 1123 aaKnown RBP4.86□□□□□ -1.63
COL8A1-205ENST00000463753 B4GALNT3Q6L9W6 998 aa4.86□□□□□ -1.63
COL8A1-205ENST00000463753 ZMYM3Q14202 1370 aa4.86□□□□□ -1.63
COL8A1-205ENST00000463753 SCAPERQ9BY12 1400 aa4.86□□□□□ -1.63
COL8A1-205ENST00000463753 WASHC2CQ9Y4E1 1318 aa4.86□□□□□ -1.63
COL8A1-205ENST00000463753 RXRBP28702 533 aa4.86□□□□□ -1.63
COL8A1-205ENST00000463753 C3orf67Q6ZVT6 689 aa4.86□□□□□ -1.63
COL8A1-205ENST00000463753 DHX37Q8IY37 1157 aaKnown RBP4.86□□□□□ -1.63
COL8A1-205ENST00000463753 NAP1L2Q9ULW6 460 aaPredicted RBP4.86□□□□□ -1.63
COL8A1-205ENST00000463753 C10orf71Q711Q0 1435 aa4.86□□□□□ -1.63
COL8A1-205ENST00000463753 C2orf72A6NCS6 295 aa4.86□□□□□ -1.63
COL8A1-205ENST00000463753 ASXL1Q8IXJ9 1541 aa4.85□□□□□ -1.63
COL8A1-205ENST00000463753 RRP9O43818 475 aaKnown RBP4.85□□□□□ -1.63
COL8A1-205ENST00000463753 FAM43AQ8N2R8 423 aa4.85□□□□□ -1.63
COL8A1-205ENST00000463753 TMC2Q8TDI7 906 aa4.85□□□□□ -1.63
COL8A1-205ENST00000463753 DLC1Q96QB1 1528 aa4.85□□□□□ -1.63
COL8A1-205ENST00000463753 DDX27Q96GQ7 796 aaKnown RBP4.85□□□□□ -1.63
COL8A1-205ENST00000463753 NGLY1Q96IV0 654 aa4.85□□□□□ -1.63
COL8A1-205ENST00000463753 ZSWIM6Q9HCJ5 1215 aa4.85□□□□□ -1.63
COL8A1-205ENST00000463753 TMEM131LA2VDJ0 1609 aa4.85□□□□□ -1.63
COL8A1-205ENST00000463753 DSG2Q14126 1118 aa4.84□□□□□ -1.63
COL8A1-205ENST00000463753 PPP1R15BQ5SWA1 713 aa4.84□□□□□ -1.63
COL8A1-205ENST00000463753 IGSF5Q9NSI5 407 aa4.84□□□□□ -1.63
COL8A1-205ENST00000463753 CICQ96RK0 1608 aaPredicted RBP4.84□□□□□ -1.63
COL8A1-205ENST00000463753 HOXB3P14651 431 aaPredicted RBP4.84□□□□□ -1.63
COL8A1-205ENST00000463753 FRAT1Q92837 279 aaPredicted RBP4.84□□□□□ -1.63
COL8A1-205ENST00000463753 PTCD2Q8WV60 388 aaKnown RBP4.83□□□□□ -1.64
COL8A1-205ENST00000463753 LMTK2Q8IWU2 1503 aa4.83□□□□□ -1.64
COL8A1-205ENST00000463753 BRWD3Q6RI45 1802 aa4.83□□□□□ -1.64
COL8A1-205ENST00000463753 ARHGEF5Q12774 1597 aa4.83□□□□□ -1.64
COL8A1-205ENST00000463753 CDC42BPAQ5VT25 1732 aa4.83□□□□□ -1.64
COL8A1-205ENST00000463753 OXER1Q8TDS5 423 aa4.83□□□□□ -1.64
COL8A1-205ENST00000463753 LARP6Q9BRS8 491 aaKnown RBP4.83□□□□□ -1.64
COL8A1-205ENST00000463753 TNRQ92752 1358 aa4.82□□□□□ -1.64
COL8A1-205ENST00000463753 ERVK-7P63135 1459 aa4.82□□□□□ -1.64
COL8A1-205ENST00000463753 C1QTNF8P60827 252 aa4.82□□□□□ -1.64
COL8A1-205ENST00000463753 PPP4R2Q9NY27 417 aa4.82□□□□□ -1.64
COL8A1-205ENST00000463753 USP35Q9P2H5 1018 aa4.82□□□□□ -1.64
COL8A1-205ENST00000463753 SHANK3Q9BYB0 1731 aa4.82□□□□□ -1.64
COL8A1-205ENST00000463753 PLPP6Q8IY26 295 aa4.82□□□□□ -1.64
COL8A1-205ENST00000463753 ARHGEF1Q92888 912 aaKnown RBP4.82□□□□□ -1.64
COL8A1-205ENST00000463753 A2MP01023 1474 aa4.82□□□□□ -1.64
COL8A1-205ENST00000463753 IQGAP3Q86VI3 1631 aa4.82□□□□□ -1.64
COL8A1-205ENST00000463753 XRN1Q8IZH2 1706 aaKnown RBP4.81□□□□□ -1.64
COL8A1-205ENST00000463753 ANKLE2Q86XL3 938 aa4.81□□□□□ -1.64
COL8A1-205ENST00000463753 P3H3Q8IVL6 736 aa4.81□□□□□ -1.64
COL8A1-205ENST00000463753 THEMISQ8N1K5 641 aaPredicted RBP4.81□□□□□ -1.64
COL8A1-205ENST00000463753 THSD7AQ9UPZ6 1657 aa4.81□□□□□ -1.64
COL8A1-205ENST00000463753 DDX10Q13206 875 aaKnown RBP4.81□□□□□ -1.64
COL8A1-205ENST00000463753 E2F4Q16254 413 aa4.81□□□□□ -1.64
COL8A1-205ENST00000463753 EHBP1L1Q8N3D4 1523 aa4.81□□□□□ -1.64
COL8A1-205ENST00000463753 SLAIN1Q8ND83 568 aa4.81□□□□□ -1.64
COL8A1-205ENST00000463753 PRXQ9BXM0 1461 aa4.81□□□□□ -1.64
COL8A1-205ENST00000463753 RRAGDQ9NQL2 400 aaPredicted RBP4.81□□□□□ -1.64
COL8A1-205ENST00000463753 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.81□□□□□ -1.64
COL8A1-205ENST00000463753 SNPHO15079 494 aa4.8□□□□□ -1.64
COL8A1-205ENST00000463753 DCAF11Q8TEB1 546 aa4.8□□□□□ -1.64
COL8A1-205ENST00000463753 ARXQ96QS3 562 aa4.8□□□□□ -1.64
COL8A1-205ENST00000463753 CANXP27824 592 aaKnown RBP4.8□□□□□ -1.64
COL8A1-205ENST00000463753 PNNQ9H307 717 aaKnown RBP4.8□□□□□ -1.64
COL8A1-205ENST00000463753 EEA1Q15075 1411 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms