RNA–Protein interactions for RNA: ENST00000463029.5

TMEM254-207, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 847 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-207ENST00000463029 HAP1P54257 671 aaPredicted RBP12.1□□□□□ -0.47
TMEM254-207ENST00000463029 PSME1Q06323 249 aa12.09□□□□□ -0.47
TMEM254-207ENST00000463029 LMOD2Q6P5Q4 547 aa12.09□□□□□ -0.47
TMEM254-207ENST00000463029 UNC5CLQ8IV45 518 aa12.09□□□□□ -0.47
TMEM254-207ENST00000463029 GJD4Q96KN9 370 aaPredicted RBP12.09□□□□□ -0.47
TMEM254-207ENST00000463029 EVX2Q03828 476 aa12.08□□□□□ -0.48
TMEM254-207ENST00000463029 CABLES1Q8TDN4 633 aa12.08□□□□□ -0.48
TMEM254-207ENST00000463029 TNS3Q68CZ2 1445 aa12.08□□□□□ -0.48
TMEM254-207ENST00000463029 KDM2AQ9Y2K7 1162 aa12.07□□□□□ -0.48
TMEM254-207ENST00000463029 SLIT2O94813 1529 aa12.06□□□□□ -0.48
TMEM254-207ENST00000463029 MARF1Q9Y4F3 1742 aaKnown RBP12.06□□□□□ -0.48
TMEM254-207ENST00000463029 PMFBP1Q8TBY8 1022 aa12.06□□□□□ -0.48
TMEM254-207ENST00000463029 HIRIP3Q9BW71 556 aaPredicted RBP12.06□□□□□ -0.48
TMEM254-207ENST00000463029 TRAK1Q9UPV9 953 aa12.06□□□□□ -0.48
TMEM254-207ENST00000463029 FARP1Q9Y4F1 1045 aaPredicted RBP12.06□□□□□ -0.48
TMEM254-207ENST00000463029 DLC1Q96QB1 1528 aa12.06□□□□□ -0.48
TMEM254-207ENST00000463029 SBNO1A3KN83 1393 aa12.05□□□□□ -0.48
TMEM254-207ENST00000463029 ANKARQ7Z5J8 1434 aa12.05□□□□□ -0.48
TMEM254-207ENST00000463029 USP32Q8NFA0 1604 aa12.05□□□□□ -0.48
TMEM254-207ENST00000463029 DCAF11Q8TEB1 546 aa12.05□□□□□ -0.48
TMEM254-207ENST00000463029 RALGAPBQ86X10 1494 aa12.05□□□□□ -0.48
TMEM254-207ENST00000463029 MINK1Q8N4C8 1332 aaPredicted RBP12.05□□□□□ -0.48
TMEM254-207ENST00000463029 ARHGEF10O15013 1369 aa12.05□□□□□ -0.48
TMEM254-207ENST00000463029 HAX1O00165 279 aa12.04□□□□□ -0.48
TMEM254-207ENST00000463029 MNX1P50219 401 aaPredicted RBP12.04□□□□□ -0.48
TMEM254-207ENST00000463029 CCDC9Q9Y3X0 531 aaKnown RBP12.04□□□□□ -0.48
TMEM254-207ENST00000463029 ADGRB1O14514 1584 aa12.04□□□□□ -0.48
TMEM254-207ENST00000463029 RGPD8O14715 1765 aaPredicted RBP12.03□□□□□ -0.48
TMEM254-207ENST00000463029 CCDC125Q86Z20 511 aa12.03□□□□□ -0.48
TMEM254-207ENST00000463029 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.03□□□□□ -0.48
TMEM254-207ENST00000463029 ADGRB2O60241 1585 aa12.02□□□□□ -0.49
TMEM254-207ENST00000463029 GLI3P10071 1580 aa12.02□□□□□ -0.49
TMEM254-207ENST00000463029 VPS72Q15906 364 aa12.02□□□□□ -0.49
TMEM254-207ENST00000463029 ZRANB1Q9UGI0 708 aa12.02□□□□□ -0.49
TMEM254-207ENST00000463029 EIF3AQ14152 1382 aaKnown RBP12.02□□□□□ -0.49
TMEM254-207ENST00000463029 GPRASP1Q5JY77 1395 aa12.02□□□□□ -0.49
TMEM254-207ENST00000463029 SEPT12Q8IYM1 358 aa12.01□□□□□ -0.49
TMEM254-207ENST00000463029 PRR36Q9H6K5 1346 aa12.01□□□□□ -0.49
TMEM254-207ENST00000463029 EP400Q96L91 3159 aa12.01□□□□□ -0.49
TMEM254-207ENST00000463029 SRCAPQ6ZRS2 3230 aa12□□□□□ -0.49
TMEM254-207ENST00000463029 FAM83GA6ND36 823 aa12□□□□□ -0.49
TMEM254-207ENST00000463029 C19orf67A6NJJ6 358 aa12□□□□□ -0.49
TMEM254-207ENST00000463029 WASLO00401 505 aaPredicted RBP12□□□□□ -0.49
TMEM254-207ENST00000463029 NGDNQ8NEJ9 315 aaKnown RBP12□□□□□ -0.49
TMEM254-207ENST00000463029 STAC3Q96MF2 364 aa12□□□□□ -0.49
TMEM254-207ENST00000463029 A0A0G2JS52 829 aa11.99□□□□□ -0.49
TMEM254-207ENST00000463029 MYT1Q01538 1121 aa11.99□□□□□ -0.49
TMEM254-207ENST00000463029 TULP4Q9NRJ4 1543 aa11.99□□□□□ -0.49
TMEM254-207ENST00000463029 ABCA3Q99758 1704 aa11.98□□□□□ -0.49
TMEM254-207ENST00000463029 BLMP54132 1417 aaPredicted RBP11.98□□□□□ -0.49
TMEM254-207ENST00000463029 PAK3O75914 559 aaPredicted RBP11.98□□□□□ -0.49
TMEM254-207ENST00000463029 HRCP23327 699 aa11.98□□□□□ -0.49
TMEM254-207ENST00000463029 PLCH1Q4KWH8 1693 aa11.97□□□□□ -0.49
TMEM254-207ENST00000463029 SF3B2Q13435 895 aaKnown RBP11.97□□□□□ -0.49
TMEM254-207ENST00000463029 BTG4Q9NY30 223 aa11.97□□□□□ -0.49
TMEM254-207ENST00000463029 NWD2Q9ULI1 1742 aa11.97□□□□□ -0.49
TMEM254-207ENST00000463029 ONECUT3O60422 494 aaPredicted RBP11.96□□□□□ -0.49
TMEM254-207ENST00000463029 FAM98CQ17RN3 349 aaKnown RBP11.96□□□□□ -0.49
TMEM254-207ENST00000463029 KRT27Q7Z3Y8 459 aa11.96□□□□□ -0.49
TMEM254-207ENST00000463029 DEFB132Q7Z7B7 95 aa11.96□□□□□ -0.49
TMEM254-207ENST00000463029 NUDT16Q96DE0 195 aaKnown RBP11.96□□□□□ -0.49
TMEM254-207ENST00000463029 TRPM3Q9HCF6 1732 aaPredicted RBP11.96□□□□□ -0.49
TMEM254-207ENST00000463029 PRDM11Q9NQV5 511 aa11.94□□□□□ -0.5
TMEM254-207ENST00000463029 BRWD3Q6RI45 1802 aa11.94□□□□□ -0.5
TMEM254-207ENST00000463029 ATP7BP35670 1465 aa11.94□□□□□ -0.5
TMEM254-207ENST00000463029 ALS2Q96Q42 1657 aa11.94□□□□□ -0.5
TMEM254-207ENST00000463029 CDK19Q9BWU1 502 aa11.93□□□□□ -0.5
TMEM254-207ENST00000463029 ARHGEF28Q8N1W1 1705 aaKnown RBP11.92□□□□□ -0.5
TMEM254-207ENST00000463029 NUTM2GQ5VZR2 741 aa11.92□□□□□ -0.5
TMEM254-207ENST00000463029 COL14A1Q05707 1796 aaKnown RBP11.92□□□□□ -0.5
TMEM254-207ENST00000463029 NRAPQ86VF7 1730 aa11.91□□□□□ -0.5
TMEM254-207ENST00000463029 SPATA31A5Q5VU36 1347 aa11.91□□□□□ -0.5
TMEM254-207ENST00000463029 SPATA31A7Q8IWB4 1347 aa11.91□□□□□ -0.5
TMEM254-207ENST00000463029 MIER1Q8N108 512 aa11.91□□□□□ -0.5
TMEM254-207ENST00000463029 SP7Q8TDD2 431 aaPredicted RBP11.91□□□□□ -0.5
TMEM254-207ENST00000463029 KIAA0232Q92628 1395 aa11.91□□□□□ -0.5
TMEM254-207ENST00000463029 ACEP12821 1306 aa11.9□□□□□ -0.5
TMEM254-207ENST00000463029 CHRNA2Q15822 529 aa11.9□□□□□ -0.5
TMEM254-207ENST00000463029 NBPF1Q3BBV0 1214 aa11.9□□□□□ -0.5
TMEM254-207ENST00000463029 CCDC61Q9Y6R9 512 aa11.9□□□□□ -0.5
TMEM254-207ENST00000463029 ITSN1Q15811 1721 aa11.89□□□□□ -0.51
TMEM254-207ENST00000463029 CD44P16070 742 aaKnown RBP11.89□□□□□ -0.51
TMEM254-207ENST00000463029 BAG6P46379 1132 aa11.89□□□□□ -0.51
TMEM254-207ENST00000463029 ZC3H6P61129 1189 aaKnown RBP11.89□□□□□ -0.51
TMEM254-207ENST00000463029 NBPF8Q3BBV2 869 aa11.89□□□□□ -0.51
TMEM254-207ENST00000463029 FAM182BQ5T319 152 aa11.89□□□□□ -0.51
TMEM254-207ENST00000463029 POLR3AO14802 1390 aaPredicted RBP11.89□□□□□ -0.51
TMEM254-207ENST00000463029 PLEKHG3A1L390 1219 aa11.88□□□□□ -0.51
TMEM254-207ENST00000463029 SRPK2P78362 688 aaKnown RBP11.88□□□□□ -0.51
TMEM254-207ENST00000463029 STRN4Q9NRL3 753 aa11.88□□□□□ -0.51
TMEM254-207ENST00000463029 CRYBG1Q9Y4K1 1723 aa11.88□□□□□ -0.51
TMEM254-207ENST00000463029 SPATA31A1Q5TZJ5 1347 aa11.87□□□□□ -0.51
TMEM254-207ENST00000463029 PLCD3Q8N3E9 789 aa11.87□□□□□ -0.51
TMEM254-207ENST00000463029 ABTB2Q8N961 1025 aa11.87□□□□□ -0.51
TMEM254-207ENST00000463029 FBXO3Q9UK99 471 aa11.87□□□□□ -0.51
TMEM254-207ENST00000463029 PSDA5PKW4 1024 aaPredicted RBP11.86□□□□□ -0.51
TMEM254-207ENST00000463029 EVA1CP58658 441 aa11.86□□□□□ -0.51
TMEM254-207ENST00000463029 EN1Q05925 392 aaPredicted RBP11.86□□□□□ -0.51
TMEM254-207ENST00000463029 USP35Q9P2H5 1018 aa11.86□□□□□ -0.51
TMEM254-207ENST00000463029 KIAA1210Q9ULL0 1709 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms