RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 ANKARQ7Z5J8 1434 aa19.19■□□□□ 0.66
HDAC6-213ENST00000462730 ADGRL3Q9HAR2 1447 aa19.19■□□□□ 0.66
HDAC6-213ENST00000462730 MTHFSP49914 203 aa19.19■□□□□ 0.66
HDAC6-213ENST00000462730 CCDC146Q8IYE0 955 aa19.19■□□□□ 0.66
HDAC6-213ENST00000462730 PLEKHG3A1L390 1219 aa19.18■□□□□ 0.66
HDAC6-213ENST00000462730 RBM33Q96EV2 1170 aaKnown RBP19.18■□□□□ 0.66
HDAC6-213ENST00000462730 CFAP53Q96M91 514 aa19.18■□□□□ 0.66
HDAC6-213ENST00000462730 ACEP12821 1306 aa19.18■□□□□ 0.66
HDAC6-213ENST00000462730 ZNF692Q9BU19 519 aaPredicted RBP19.17■□□□□ 0.66
HDAC6-213ENST00000462730 CDCA7LQ96GN5 454 aa19.16■□□□□ 0.66
HDAC6-213ENST00000462730 USP6P35125 1406 aa19.16■□□□□ 0.66
HDAC6-213ENST00000462730 NME9Q86XW9 330 aa19.15■□□□□ 0.66
HDAC6-213ENST00000462730 ERICH6BQ5W0A0 696 aa19.13■□□□□ 0.65
HDAC6-213ENST00000462730 PMFBP1Q8TBY8 1022 aa19.13■□□□□ 0.65
HDAC6-213ENST00000462730 ANP32EQ9BTT0 268 aa19.13■□□□□ 0.65
HDAC6-213ENST00000462730 RNF123Q5XPI4 1314 aa19.13■□□□□ 0.65
HDAC6-213ENST00000462730 STRCP1A6NGW2 1772 aa19.13■□□□□ 0.65
HDAC6-213ENST00000462730 STRCQ7RTU9 1775 aa19.13■□□□□ 0.65
HDAC6-213ENST00000462730 APAF1O14727 1248 aa19.12■□□□□ 0.65
HDAC6-213ENST00000462730 TTC21BQ7Z4L5 1316 aa19.11■□□□□ 0.65
HDAC6-213ENST00000462730 ZNF521Q96K83 1311 aa19.11■□□□□ 0.65
HDAC6-213ENST00000462730 SSH2Q76I76 1423 aa19.11■□□□□ 0.65
HDAC6-213ENST00000462730 C14orf37Q86TY3 774 aa19.1■□□□□ 0.65
HDAC6-213ENST00000462730 ZRANB1Q9UGI0 708 aa19.1■□□□□ 0.65
HDAC6-213ENST00000462730 COL3A1P02461 1466 aaPredicted RBP19.1■□□□□ 0.65
HDAC6-213ENST00000462730 NGDNQ8NEJ9 315 aaKnown RBP19.1■□□□□ 0.65
HDAC6-213ENST00000462730 PROSER2Q86WR7 435 aaPredicted RBP19.08■□□□□ 0.65
HDAC6-213ENST00000462730 COG3Q96JB2 828 aa19.08■□□□□ 0.65
HDAC6-213ENST00000462730 BCL11AQ9H165 835 aa19.08■□□□□ 0.65
HDAC6-213ENST00000462730 RCAN3Q9UKA8 241 aa19.08■□□□□ 0.65
HDAC6-213ENST00000462730 MAP2P11137 1827 aaKnown RBP19.08■□□□□ 0.65
HDAC6-213ENST00000462730 OVOS2A0A0J9YW53 1432 aa19.08■□□□□ 0.64
HDAC6-213ENST00000462730 OVOS2Q6IE36 1432 aa19.08■□□□□ 0.64
HDAC6-213ENST00000462730 GOLGA2Q08379 1002 aa19.06■□□□□ 0.64
HDAC6-213ENST00000462730 RUNDC1Q96C34 613 aa19.06■□□□□ 0.64
HDAC6-213ENST00000462730 PIK3C2AO00443 1686 aa19.06■□□□□ 0.64
HDAC6-213ENST00000462730 FBLN1P23142 703 aa19.06■□□□□ 0.64
HDAC6-213ENST00000462730 NGEFQ8N5V2 710 aa19.06■□□□□ 0.64
HDAC6-213ENST00000462730 AATKQ6ZMQ8 1374 aa19.05■□□□□ 0.64
HDAC6-213ENST00000462730 IQSEC2Q5JU85 1478 aa19.05■□□□□ 0.64
HDAC6-213ENST00000462730 PPP4R2Q9NY27 417 aa19.05■□□□□ 0.64
HDAC6-213ENST00000462730 TTC21AQ8NDW8 1320 aa19.05■□□□□ 0.64
HDAC6-213ENST00000462730 U2AF1L5P0DN76 240 aaPredicted RBP19.04■□□□□ 0.64
HDAC6-213ENST00000462730 U2AF1Q01081 240 aaKnown RBP eCLIP19.04■□□□□ 0.64
HDAC6-213ENST00000462730 PNPLA6Q8IY17 1366 aa19.04■□□□□ 0.64
HDAC6-213ENST00000462730 RRP1P56182 461 aaKnown RBP19.04■□□□□ 0.64
HDAC6-213ENST00000462730 POLKQ9UBT6 870 aa19.04■□□□□ 0.64
HDAC6-213ENST00000462730 PHF8Q9UPP1 1060 aa19.04■□□□□ 0.64
HDAC6-213ENST00000462730 RBM19Q9Y4C8 960 aaKnown RBP19.04■□□□□ 0.64
HDAC6-213ENST00000462730 TMEM94Q12767 1356 aa19.03■□□□□ 0.64
HDAC6-213ENST00000462730 CDK12Q9NYV4 1490 aaPredicted RBP19.03■□□□□ 0.64
HDAC6-213ENST00000462730 DUSP27Q5VZP5 1158 aa19.02■□□□□ 0.64
HDAC6-213ENST00000462730 U2SURPO15042 1029 aaKnown RBP19.01■□□□□ 0.63
HDAC6-213ENST00000462730 SLFN5Q08AF3 891 aa19.01■□□□□ 0.63
HDAC6-213ENST00000462730 EMILIN1Q9Y6C2 1016 aa19.01■□□□□ 0.63
HDAC6-213ENST00000462730 PPM1GO15355 546 aaPredicted RBP19.01■□□□□ 0.63
HDAC6-213ENST00000462730 ESCO1Q5FWF5 840 aa19.01■□□□□ 0.63
HDAC6-213ENST00000462730 TCP11L2Q8N4U5 519 aa19■□□□□ 0.63
HDAC6-213ENST00000462730 C19orf44Q9H6X5 657 aa19■□□□□ 0.63
HDAC6-213ENST00000462730 NCOA3Q9Y6Q9 1424 aa19■□□□□ 0.63
HDAC6-213ENST00000462730 USP54Q70EL1 1684 aa19■□□□□ 0.63
HDAC6-213ENST00000462730 MARF1Q9Y4F3 1742 aaKnown RBP19■□□□□ 0.63
HDAC6-213ENST00000462730 USP31Q70CQ4 1352 aa18.99■□□□□ 0.63
HDAC6-213ENST00000462730 DIAPH1O60610 1272 aaKnown RBP18.99■□□□□ 0.63
HDAC6-213ENST00000462730 RRS1Q15050 365 aaKnown RBP18.99■□□□□ 0.63
HDAC6-213ENST00000462730 RRP7AQ9Y3A4 280 aaKnown RBP18.99■□□□□ 0.63
HDAC6-213ENST00000462730 DCCP43146 1447 aa18.99■□□□□ 0.63
HDAC6-213ENST00000462730 XIRP1Q702N8 1843 aaKnown RBP18.98■□□□□ 0.63
HDAC6-213ENST00000462730 C1orf167Q5SNV9 1468 aa18.98■□□□□ 0.63
HDAC6-213ENST00000462730 KIF1AQ12756 1690 aa18.98■□□□□ 0.63
HDAC6-213ENST00000462730 E9PSI1 815 aa18.97■□□□□ 0.63
HDAC6-213ENST00000462730 NEUROD2Q15784 382 aa18.97■□□□□ 0.63
HDAC6-213ENST00000462730 WWC1Q8IX03 1113 aa18.97■□□□□ 0.63
HDAC6-213ENST00000462730 TRMT2AQ8IZ69 625 aaKnown RBP18.97■□□□□ 0.63
HDAC6-213ENST00000462730 SPINK5Q9NQ38 1064 aaPredicted RBP18.97■□□□□ 0.63
HDAC6-213ENST00000462730 DMRT2Q9Y5R5 561 aa18.97■□□□□ 0.63
HDAC6-213ENST00000462730 ORAI2Q96SN7 254 aa18.96■□□□□ 0.63
HDAC6-213ENST00000462730 PEAK1Q9H792 1746 aa18.96■□□□□ 0.63
HDAC6-213ENST00000462730 LRRC7Q96NW7 1537 aa18.96■□□□□ 0.63
HDAC6-213ENST00000462730 MST1RQ04912 1400 aa18.95■□□□□ 0.62
HDAC6-213ENST00000462730 PAK3O75914 559 aaPredicted RBP18.94■□□□□ 0.62
HDAC6-213ENST00000462730 B4GALNT3Q6L9W6 998 aa18.94■□□□□ 0.62
HDAC6-213ENST00000462730 SOX12O15370 315 aa18.93■□□□□ 0.62
HDAC6-213ENST00000462730 ATF3P18847 181 aa18.93■□□□□ 0.62
HDAC6-213ENST00000462730 ZNF335Q9H4Z2 1342 aaPredicted RBP18.93■□□□□ 0.62
HDAC6-213ENST00000462730 NLRP6P59044 892 aa18.93■□□□□ 0.62
HDAC6-213ENST00000462730 ABTB2Q8N961 1025 aa18.93■□□□□ 0.62
HDAC6-213ENST00000462730 PLEKHF1Q96S99 279 aa18.93■□□□□ 0.62
HDAC6-213ENST00000462730 PHF23Q9BUL5 403 aaPredicted RBP18.93■□□□□ 0.62
HDAC6-213ENST00000462730 MSH6P52701 1360 aa18.92■□□□□ 0.62
HDAC6-213ENST00000462730 MAPK8IP3Q9UPT6 1336 aa18.92■□□□□ 0.62
HDAC6-213ENST00000462730 PSME1Q06323 249 aa18.92■□□□□ 0.62
HDAC6-213ENST00000462730 CCDC27Q2M243 656 aa18.92■□□□□ 0.62
HDAC6-213ENST00000462730 NCBP3Q53F19 620 aaKnown RBP18.92■□□□□ 0.62
HDAC6-213ENST00000462730 NUTM2GQ5VZR2 741 aa18.92■□□□□ 0.62
HDAC6-213ENST00000462730 TRPM3Q9HCF6 1732 aaPredicted RBP18.91■□□□□ 0.62
HDAC6-213ENST00000462730 FOXO3O43524 673 aa18.9■□□□□ 0.62
HDAC6-213ENST00000462730 IL13P35225 146 aa18.9■□□□□ 0.62
HDAC6-213ENST00000462730 WDR63Q8IWG1 891 aa18.9■□□□□ 0.62
HDAC6-213ENST00000462730 PLIN1O60240 522 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms