RNA–Protein interactions for RNA: ENST00000461841.7

CDH23-208, Transcript of cadherin related 23, human

TSL 5 BASIC

Gene CDH23, Length 2,000 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH23-208	ENST00000461841	NPHP4	O75161	1426 aa	Predicted RBP	33.62	■■■□□ 2.97
CDH23-208	ENST00000461841	NGEF	Q8N5V2	710 aa		33.62	■■■□□ 2.97
CDH23-208	ENST00000461841	PNPLA6	Q8IY17	1366 aa		33.61	■■■□□ 2.97
CDH23-208	ENST00000461841	ERICH6B	Q5W0A0	696 aa		33.61	■■■□□ 2.97
CDH23-208	ENST00000461841	RUNDC1	Q96C34	613 aa		33.61	■■■□□ 2.97
CDH23-208	ENST00000461841	ZRANB1	Q9UGI0	708 aa		33.61	■■■□□ 2.97
CDH23-208	ENST00000461841	FBLN1	P23142	703 aa		33.6	■■■□□ 2.97
CDH23-208	ENST00000461841	POLK	Q9UBT6	870 aa		33.59	■■■□□ 2.97
CDH23-208	ENST00000461841	GOLGA2	Q08379	1002 aa		33.58	■■■□□ 2.97
CDH23-208	ENST00000461841	U2AF1L5	P0DN76	240 aa	Predicted RBP	33.58	■■■□□ 2.97
CDH23-208	ENST00000461841	U2AF1	Q01081	240 aa	Known RBP eCLIP	33.58	■■■□□ 2.97
CDH23-208	ENST00000461841	RCAN3	Q9UKA8	241 aa		33.57	■■■□□ 2.96
CDH23-208	ENST00000461841	COG3	Q96JB2	828 aa		33.57	■■■□□ 2.96
CDH23-208	ENST00000461841	USP6	P35125	1406 aa		33.56	■■■□□ 2.96
CDH23-208	ENST00000461841	TTC21B	Q7Z4L5	1316 aa		33.56	■■■□□ 2.96
CDH23-208	ENST00000461841	NRK	Q7Z2Y5	1582 aa		33.55	■■■□□ 2.96
CDH23-208	ENST00000461841	RGPD8	O14715	1765 aa	Predicted RBP	33.54	■■■□□ 2.96
CDH23-208	ENST00000461841	PMFBP1	Q8TBY8	1022 aa		33.53	■■■□□ 2.96
CDH23-208	ENST00000461841	DUSP27	Q5VZP5	1158 aa		33.53	■■■□□ 2.96
CDH23-208	ENST00000461841	MAP2	P11137	1827 aa	Known RBP	33.53	■■■□□ 2.96
CDH23-208	ENST00000461841	ANKAR	Q7Z5J8	1434 aa		33.53	■■■□□ 2.96
CDH23-208	ENST00000461841	AATK	Q6ZMQ8	1374 aa		33.52	■■■□□ 2.96
CDH23-208	ENST00000461841	TCP11L2	Q8N4U5	519 aa		33.52	■■■□□ 2.96
CDH23-208	ENST00000461841	IQSEC2	Q5JU85	1478 aa		33.52	■■■□□ 2.96
CDH23-208	ENST00000461841	DIAPH1	O60610	1272 aa	Known RBP	33.52	■■■□□ 2.96
CDH23-208	ENST00000461841	U2SURP	O15042	1029 aa	Known RBP	33.51	■■■□□ 2.95
CDH23-208	ENST00000461841	SLFN5	Q08AF3	891 aa		33.51	■■■□□ 2.95
CDH23-208	ENST00000461841	SSH2	Q76I76	1423 aa		33.51	■■■□□ 2.95
CDH23-208	ENST00000461841	PPM1G	O15355	546 aa	Predicted RBP	33.5	■■■□□ 2.95
CDH23-208	ENST00000461841	FMN2	Q9NZ56	1722 aa		33.49	■■■□□ 2.95
CDH23-208	ENST00000461841	TRMT2A	Q8IZ69	625 aa	Known RBP	33.48	■■■□□ 2.95
CDH23-208	ENST00000461841	WWC1	Q8IX03	1113 aa		33.48	■■■□□ 2.95
CDH23-208	ENST00000461841	EMILIN1	Q9Y6C2	1016 aa		33.48	■■■□□ 2.95
CDH23-208	ENST00000461841	NALCN	Q8IZF0	1738 aa		33.47	■■■□□ 2.95
CDH23-208	ENST00000461841	NGDN	Q8NEJ9	315 aa	Known RBP	33.47	■■■□□ 2.95
CDH23-208	ENST00000461841	RBM33	Q96EV2	1170 aa	Known RBP	33.47	■■■□□ 2.95
CDH23-208	ENST00000461841	SPINK5	Q9NQ38	1064 aa	Predicted RBP	33.46	■■■□□ 2.95
CDH23-208	ENST00000461841	RRP7A	Q9Y3A4	280 aa	Known RBP	33.46	■■■□□ 2.95
CDH23-208	ENST00000461841	NEUROD2	Q15784	382 aa		33.45	■■■□□ 2.94
CDH23-208	ENST00000461841	PLEKHF1	Q96S99	279 aa		33.45	■■■□□ 2.94
CDH23-208	ENST00000461841	PHF23	Q9BUL5	403 aa	Predicted RBP	33.45	■■■□□ 2.94
CDH23-208	ENST00000461841	DMRT2	Q9Y5R5	561 aa		33.44	■■■□□ 2.94
CDH23-208	ENST00000461841	RRP1	P56182	461 aa	Known RBP	33.43	■■■□□ 2.94
CDH23-208	ENST00000461841	PPP4R2	Q9NY27	417 aa		33.43	■■■□□ 2.94
CDH23-208	ENST00000461841	OVOS2	A0A0J9YW53	1432 aa		33.43	■■■□□ 2.94
CDH23-208	ENST00000461841	OVOS2	Q6IE36	1432 aa		33.43	■■■□□ 2.94
CDH23-208	ENST00000461841		E9PSI1	815 aa		33.41	■■■□□ 2.94
CDH23-208	ENST00000461841	NCBP3	Q53F19	620 aa	Known RBP	33.41	■■■□□ 2.94
CDH23-208	ENST00000461841	TTC21A	Q8NDW8	1320 aa		33.41	■■■□□ 2.94
CDH23-208	ENST00000461841	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.41	■■■□□ 2.94
CDH23-208	ENST00000461841	RRS1	Q15050	365 aa	Known RBP	33.41	■■■□□ 2.94
CDH23-208	ENST00000461841	ADGRL3	Q9HAR2	1447 aa		33.41	■■■□□ 2.94
CDH23-208	ENST00000461841	CCDC27	Q2M243	656 aa		33.4	■■■□□ 2.94
CDH23-208	ENST00000461841	NWD1	Q149M9	1564 aa		33.37	■■■□□ 2.93
CDH23-208	ENST00000461841	IL13	P35225	146 aa		33.35	■■■□□ 2.93
CDH23-208	ENST00000461841	PELP1	Q8IZL8	1130 aa	Known RBP	33.35	■■■□□ 2.93
CDH23-208	ENST00000461841	USP31	Q70CQ4	1352 aa		33.35	■■■□□ 2.93
CDH23-208	ENST00000461841	FCHSD2	O94868	740 aa		33.35	■■■□□ 2.93
CDH23-208	ENST00000461841	PNN	Q9H307	717 aa	Known RBP	33.34	■■■□□ 2.93
CDH23-208	ENST00000461841	WDR63	Q8IWG1	891 aa		33.33	■■■□□ 2.93
CDH23-208	ENST00000461841	MAPK8IP3	Q9UPT6	1336 aa		33.32	■■■□□ 2.92
CDH23-208	ENST00000461841	TMPO	P42166	694 aa	Known RBP	33.31	■■■□□ 2.92
CDH23-208	ENST00000461841	PHF8	Q9UPP1	1060 aa		33.31	■■■□□ 2.92
CDH23-208	ENST00000461841	C14orf37	Q86TY3	774 aa		33.3	■■■□□ 2.92
CDH23-208	ENST00000461841	RSPH6A	Q9H0K4	717 aa		33.29	■■■□□ 2.92
CDH23-208	ENST00000461841	KDM4F	A0A1W2PPD8	638 aa		33.28	■■■□□ 2.92
CDH23-208	ENST00000461841	PROSER2	Q86WR7	435 aa	Predicted RBP	33.28	■■■□□ 2.92
CDH23-208	ENST00000461841	PIK3C2A	O00443	1686 aa		33.28	■■■□□ 2.92
CDH23-208	ENST00000461841	LRRC7	Q96NW7	1537 aa		33.27	■■■□□ 2.92
CDH23-208	ENST00000461841	PRKAR2B	P31323	418 aa		33.25	■■■□□ 2.91
CDH23-208	ENST00000461841	HSPA2	P54652	639 aa		33.25	■■■□□ 2.91
CDH23-208	ENST00000461841	PLIN1	O60240	522 aa		33.24	■■■□□ 2.91
CDH23-208	ENST00000461841	HMOX1	P09601	288 aa		33.24	■■■□□ 2.91
CDH23-208	ENST00000461841	B4GALNT3	Q6L9W6	998 aa		33.24	■■■□□ 2.91
CDH23-208	ENST00000461841	TRIM35	Q9UPQ4	493 aa		33.24	■■■□□ 2.91
CDH23-208	ENST00000461841	ESCO1	Q5FWF5	840 aa		33.23	■■■□□ 2.91
CDH23-208	ENST00000461841	SOX12	O15370	315 aa		33.22	■■■□□ 2.91
CDH23-208	ENST00000461841	NLRP6	P59044	892 aa		33.22	■■■□□ 2.91
CDH23-208	ENST00000461841	RIPK4	P57078	832 aa		33.2	■■■□□ 2.91
CDH23-208	ENST00000461841	PEAK1	Q9H792	1746 aa		33.2	■■■□□ 2.91
CDH23-208	ENST00000461841	EIF4A2	Q14240	407 aa	Known RBP	33.19	■■■□□ 2.9
CDH23-208	ENST00000461841	PHACTR3	Q96KR7	559 aa		33.19	■■■□□ 2.9
CDH23-208	ENST00000461841	MAP3K19	Q56UN5	1328 aa		33.18	■■■□□ 2.9
CDH23-208	ENST00000461841	PAK3	O75914	559 aa	Predicted RBP	33.18	■■■□□ 2.9
CDH23-208	ENST00000461841	HSP90AB2P	Q58FF8	381 aa		33.18	■■■□□ 2.9
CDH23-208	ENST00000461841	ABTB2	Q8N961	1025 aa		33.18	■■■□□ 2.9
CDH23-208	ENST00000461841	NEFM	P07197	916 aa		33.17	■■■□□ 2.9
CDH23-208	ENST00000461841	EXOC6	Q8TAG9	804 aa		33.16	■■■□□ 2.9
CDH23-208	ENST00000461841	C19orf44	Q9H6X5	657 aa		33.16	■■■□□ 2.9
CDH23-208	ENST00000461841	NUTM2G	Q5VZR2	741 aa		33.16	■■■□□ 2.9
CDH23-208	ENST00000461841	ORAI2	Q96SN7	254 aa		33.15	■■■□□ 2.9
CDH23-208	ENST00000461841	MYH16	Q9H6N6	1097 aa		33.15	■■■□□ 2.9
CDH23-208	ENST00000461841	MARF1	Q9Y4F3	1742 aa	Known RBP	33.14	■■■□□ 2.9
CDH23-208	ENST00000461841	USP54	Q70EL1	1684 aa		33.14	■■■□□ 2.9
CDH23-208	ENST00000461841	PSME1	Q06323	249 aa		33.14	■■■□□ 2.9
CDH23-208	ENST00000461841	STRCP1	A6NGW2	1772 aa		33.12	■■■□□ 2.89
CDH23-208	ENST00000461841	SBNO1	A3KN83	1393 aa		33.12	■■■□□ 2.89
CDH23-208	ENST00000461841	LMTK3	Q96Q04	1460 aa		33.12	■■■□□ 2.89
CDH23-208	ENST00000461841	NFE2L2	Q16236	605 aa		33.11	■■■□□ 2.89
CDH23-208	ENST00000461841	FLT4	P35916	1363 aa		33.1	■■■□□ 2.89

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms