RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 USP6P35125 1406 aa9.91□□□□□ -0.82
LSG1-205ENST00000461343 FYB1O15117 783 aa9.91□□□□□ -0.82
LSG1-205ENST00000461343 ATF3P18847 181 aa9.91□□□□□ -0.82
LSG1-205ENST00000461343 CADPS2Q86UW7 1296 aa9.91□□□□□ -0.82
LSG1-205ENST00000461343 MSH6P52701 1360 aa9.9□□□□□ -0.82
LSG1-205ENST00000461343 KIF24Q5T7B8 1368 aa9.9□□□□□ -0.82
LSG1-205ENST00000461343 ACEP12821 1306 aa9.9□□□□□ -0.82
LSG1-205ENST00000461343 LRRC7Q96NW7 1537 aa9.9□□□□□ -0.82
LSG1-205ENST00000461343 BLMP54132 1417 aaPredicted RBP9.9□□□□□ -0.83
LSG1-205ENST00000461343 KIF1AQ12756 1690 aa9.9□□□□□ -0.83
LSG1-205ENST00000461343 TTC21BQ7Z4L5 1316 aa9.88□□□□□ -0.83
LSG1-205ENST00000461343 PRR36Q9H6K5 1346 aa9.88□□□□□ -0.83
LSG1-205ENST00000461343 NALCNQ8IZF0 1738 aa9.88□□□□□ -0.83
LSG1-205ENST00000461343 NEFLP07196 543 aa9.88□□□□□ -0.83
LSG1-205ENST00000461343 PSME1Q06323 249 aa9.88□□□□□ -0.83
LSG1-205ENST00000461343 PHF8Q9UPP1 1060 aa9.88□□□□□ -0.83
LSG1-205ENST00000461343 USP31Q70CQ4 1352 aa9.88□□□□□ -0.83
LSG1-205ENST00000461343 MTHFSP49914 203 aa9.87□□□□□ -0.83
LSG1-205ENST00000461343 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.87□□□□□ -0.83
LSG1-205ENST00000461343 GGNBP2Q9H3C7 697 aa9.87□□□□□ -0.83
LSG1-205ENST00000461343 CDK12Q9NYV4 1490 aaPredicted RBP9.86□□□□□ -0.83
LSG1-205ENST00000461343 CCDC184Q52MB2 194 aa9.86□□□□□ -0.83
LSG1-205ENST00000461343 NRKQ7Z2Y5 1582 aa9.86□□□□□ -0.83
LSG1-205ENST00000461343 SMG6Q86US8 1419 aaKnown RBP9.86□□□□□ -0.83
LSG1-205ENST00000461343 PNPLA6Q8IY17 1366 aa9.86□□□□□ -0.83
LSG1-205ENST00000461343 DIAPH1O60610 1272 aaKnown RBP9.85□□□□□ -0.83
LSG1-205ENST00000461343 ESCO1Q5FWF5 840 aa9.85□□□□□ -0.83
LSG1-205ENST00000461343 KCNH5Q8NCM2 988 aa9.85□□□□□ -0.83
LSG1-205ENST00000461343 TMEM94Q12767 1356 aa9.85□□□□□ -0.83
LSG1-205ENST00000461343 OVOS2A0A0J9YW53 1432 aa9.84□□□□□ -0.83
LSG1-205ENST00000461343 OVOS2Q6IE36 1432 aa9.84□□□□□ -0.83
LSG1-205ENST00000461343 SSH2Q76I76 1423 aa9.84□□□□□ -0.83
LSG1-205ENST00000461343 TNNT2P45379 298 aaPredicted RBP9.84□□□□□ -0.83
LSG1-205ENST00000461343 RUNDC1Q96C34 613 aa9.84□□□□□ -0.83
LSG1-205ENST00000461343 USP54Q70EL1 1684 aa9.83□□□□□ -0.84
LSG1-205ENST00000461343 NPHP3Q7Z494 1330 aa9.83□□□□□ -0.84
LSG1-205ENST00000461343 MAPK8IP3Q9UPT6 1336 aa9.83□□□□□ -0.84
LSG1-205ENST00000461343 HSPA2P54652 639 aa9.83□□□□□ -0.84
LSG1-205ENST00000461343 CALD1Q05682 793 aaKnown RBP9.83□□□□□ -0.84
LSG1-205ENST00000461343 ADAMTS8Q9UP79 889 aa9.83□□□□□ -0.84
LSG1-205ENST00000461343 RTL1A6NKG5 1358 aa9.83□□□□□ -0.84
LSG1-205ENST00000461343 FCHSD2O94868 740 aa9.82□□□□□ -0.84
LSG1-205ENST00000461343 U2AF1L5P0DN76 240 aaPredicted RBP9.82□□□□□ -0.84
LSG1-205ENST00000461343 U2AF1Q01081 240 aaKnown RBP eCLIP9.82□□□□□ -0.84
LSG1-205ENST00000461343 ERICH6BQ5W0A0 696 aa9.82□□□□□ -0.84
LSG1-205ENST00000461343 NME9Q86XW9 330 aa9.82□□□□□ -0.84
LSG1-205ENST00000461343 ABTB2Q8N961 1025 aa9.82□□□□□ -0.84
LSG1-205ENST00000461343 PMFBP1Q8TBY8 1022 aa9.82□□□□□ -0.84
LSG1-205ENST00000461343 C1orf167Q5SNV9 1468 aa9.82□□□□□ -0.84
LSG1-205ENST00000461343 STRCQ7RTU9 1775 aa9.82□□□□□ -0.84
LSG1-205ENST00000461343 MST1RQ04912 1400 aa9.82□□□□□ -0.84
LSG1-205ENST00000461343 FLT4P35916 1363 aa9.81□□□□□ -0.84
LSG1-205ENST00000461343 NUTM2FA1L443 756 aa9.81□□□□□ -0.84
LSG1-205ENST00000461343 NLRP6P59044 892 aa9.81□□□□□ -0.84
LSG1-205ENST00000461343 LMOD3Q0VAK6 560 aa9.81□□□□□ -0.84
LSG1-205ENST00000461343 CCDC27Q2M243 656 aa9.81□□□□□ -0.84
LSG1-205ENST00000461343 POLKQ9UBT6 870 aa9.81□□□□□ -0.84
LSG1-205ENST00000461343 SBNO1A3KN83 1393 aa9.8□□□□□ -0.84
LSG1-205ENST00000461343 ARHGEF10O15013 1369 aa9.8□□□□□ -0.84
LSG1-205ENST00000461343 PAK3O75914 559 aaPredicted RBP9.8□□□□□ -0.84
LSG1-205ENST00000461343 PELP1Q8IZL8 1130 aaKnown RBP9.8□□□□□ -0.84
LSG1-205ENST00000461343 E9PSI1 815 aa9.79□□□□□ -0.84
LSG1-205ENST00000461343 U2SURPO15042 1029 aaKnown RBP9.79□□□□□ -0.84
LSG1-205ENST00000461343 GOLGA2Q08379 1002 aa9.79□□□□□ -0.84
LSG1-205ENST00000461343 MAP2P11137 1827 aaKnown RBP9.79□□□□□ -0.84
LSG1-205ENST00000461343 COL3A1P02461 1466 aaPredicted RBP9.79□□□□□ -0.84
LSG1-205ENST00000461343 RGPD8O14715 1765 aaPredicted RBP9.78□□□□□ -0.84
LSG1-205ENST00000461343 PPM1GO15355 546 aaPredicted RBP9.78□□□□□ -0.84
LSG1-205ENST00000461343 AMPHP49418 695 aa9.78□□□□□ -0.84
LSG1-205ENST00000461343 WDR63Q8IWG1 891 aa9.78□□□□□ -0.84
LSG1-205ENST00000461343 SHPRHQ149N8 1683 aa9.77□□□□□ -0.84
LSG1-205ENST00000461343 CACNB1Q02641 598 aaPredicted RBP9.77□□□□□ -0.85
LSG1-205ENST00000461343 KRT28Q7Z3Y7 464 aa9.77□□□□□ -0.85
LSG1-205ENST00000461343 MYH16Q9H6N6 1097 aa9.77□□□□□ -0.85
LSG1-205ENST00000461343 PIK3C2AO00443 1686 aa9.77□□□□□ -0.85
LSG1-205ENST00000461343 ABCC6O95255 1503 aa9.77□□□□□ -0.85
LSG1-205ENST00000461343 PLEKHG2Q9H7P9 1386 aa9.76□□□□□ -0.85
LSG1-205ENST00000461343 CT47B1P0C2W7 299 aaPredicted RBP9.76□□□□□ -0.85
LSG1-205ENST00000461343 HAP1P54257 671 aaPredicted RBP9.76□□□□□ -0.85
LSG1-205ENST00000461343 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.76□□□□□ -0.85
LSG1-205ENST00000461343 IL16Q14005 1332 aa9.76□□□□□ -0.85
LSG1-205ENST00000461343 APAF1O14727 1248 aa9.75□□□□□ -0.85
LSG1-205ENST00000461343 FOXO3O43524 673 aa9.75□□□□□ -0.85
LSG1-205ENST00000461343 SLAIN2Q9P270 581 aa9.75□□□□□ -0.85
LSG1-205ENST00000461343 STRCP1A6NGW2 1772 aa9.74□□□□□ -0.85
LSG1-205ENST00000461343 IL13P35225 146 aa9.74□□□□□ -0.85
LSG1-205ENST00000461343 MAPK8IP2Q13387 824 aaPredicted RBP9.74□□□□□ -0.85
LSG1-205ENST00000461343 TCP11L2Q8N4U5 519 aa9.74□□□□□ -0.85
LSG1-205ENST00000461343 GTF3C3Q9Y5Q9 886 aa9.74□□□□□ -0.85
LSG1-205ENST00000461343 USP19O94966 1318 aa9.74□□□□□ -0.85
LSG1-205ENST00000461343 ZNF335Q9H4Z2 1342 aaPredicted RBP9.74□□□□□ -0.85
LSG1-205ENST00000461343 PHRF1Q9P1Y6 1649 aaKnown RBP9.74□□□□□ -0.85
LSG1-205ENST00000461343 TNS3Q68CZ2 1445 aa9.73□□□□□ -0.85
LSG1-205ENST00000461343 IQSEC2Q5JU85 1478 aa9.73□□□□□ -0.85
LSG1-205ENST00000461343 SLIT3O75094 1523 aa9.73□□□□□ -0.85
LSG1-205ENST00000461343 ORAI2Q96SN7 254 aa9.73□□□□□ -0.85
LSG1-205ENST00000461343 EMILIN1Q9Y6C2 1016 aa9.73□□□□□ -0.85
LSG1-205ENST00000461343 MAP3K19Q56UN5 1328 aa9.73□□□□□ -0.85
LSG1-205ENST00000461343 ZNF521Q96K83 1311 aa9.73□□□□□ -0.85
LSG1-205ENST00000461343 RRS1Q15050 365 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms