RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 CDK19Q9BWU1 502 aa20.05■□□□□ 0.8
COL5A3-202ENST00000461214 CCDC7Q96M83 1385 aa20.05■□□□□ 0.8
COL5A3-202ENST00000461214 TRPM3Q9HCF6 1732 aaPredicted RBP20.05■□□□□ 0.8
COL5A3-202ENST00000461214 PSDA5PKW4 1024 aaPredicted RBP20.04■□□□□ 0.8
COL5A3-202ENST00000461214 SRPK2P78362 688 aaKnown RBP20.04■□□□□ 0.8
COL5A3-202ENST00000461214 BCL9LQ86UU0 1499 aa20.04■□□□□ 0.8
COL5A3-202ENST00000461214 PPIP5K1Q6PFW1 1433 aa20.03■□□□□ 0.8
COL5A3-202ENST00000461214 LRP5O75197 1615 aa20.03■□□□□ 0.8
COL5A3-202ENST00000461214 KIF7Q2M1P5 1343 aa20.02■□□□□ 0.8
COL5A3-202ENST00000461214 USP54Q70EL1 1684 aa20.02■□□□□ 0.8
COL5A3-202ENST00000461214 PRR36Q9H6K5 1346 aa20.01■□□□□ 0.79
COL5A3-202ENST00000461214 CABP2Q9NPB3 220 aa20■□□□□ 0.79
COL5A3-202ENST00000461214 WASHC2AQ641Q2 1341 aa20■□□□□ 0.79
COL5A3-202ENST00000461214 XPCQ01831 940 aaPredicted RBP19.99■□□□□ 0.79
COL5A3-202ENST00000461214 ALS2Q96Q42 1657 aa19.98■□□□□ 0.79
COL5A3-202ENST00000461214 ZNF316A6NFI3 1004 aaPredicted RBP19.98■□□□□ 0.79
COL5A3-202ENST00000461214 C11orf95C9JLR9 678 aaPredicted RBP19.98■□□□□ 0.79
COL5A3-202ENST00000461214 NUDT16Q96DE0 195 aaKnown RBP19.98■□□□□ 0.79
COL5A3-202ENST00000461214 CD163L1Q9NR16 1453 aa19.98■□□□□ 0.79
COL5A3-202ENST00000461214 COL22A1Q8NFW1 1626 aaPredicted RBP19.98■□□□□ 0.79
COL5A3-202ENST00000461214 POLR3AO14802 1390 aaPredicted RBP19.97■□□□□ 0.79
COL5A3-202ENST00000461214 CCDC61Q9Y6R9 512 aa19.97■□□□□ 0.79
COL5A3-202ENST00000461214 ANKRD36BQ8N2N9 1353 aa19.95■□□□□ 0.79
COL5A3-202ENST00000461214 CPSF1Q10570 1443 aaKnown RBP19.95■□□□□ 0.78
COL5A3-202ENST00000461214 MARF1Q9Y4F3 1742 aaKnown RBP19.95■□□□□ 0.78
COL5A3-202ENST00000461214 UNC5CLQ8IV45 518 aa19.94■□□□□ 0.78
COL5A3-202ENST00000461214 GLI3P10071 1580 aa19.94■□□□□ 0.78
COL5A3-202ENST00000461214 PIK3C2AO00443 1686 aa19.94■□□□□ 0.78
COL5A3-202ENST00000461214 ABCA3Q99758 1704 aa19.93■□□□□ 0.78
COL5A3-202ENST00000461214 CRYBG1Q9Y4K1 1723 aa19.93■□□□□ 0.78
COL5A3-202ENST00000461214 BRWD3Q6RI45 1802 aa19.93■□□□□ 0.78
COL5A3-202ENST00000461214 ESCO1Q5FWF5 840 aa19.93■□□□□ 0.78
COL5A3-202ENST00000461214 SEPT12Q8IYM1 358 aa19.93■□□□□ 0.78
COL5A3-202ENST00000461214 PLEKHG3A1L390 1219 aa19.92■□□□□ 0.78
COL5A3-202ENST00000461214 NUTM2FA1L443 756 aa19.92■□□□□ 0.78
COL5A3-202ENST00000461214 A0A1W2PP64 1363 aa19.92■□□□□ 0.78
COL5A3-202ENST00000461214 BRD4O60885 1362 aaPredicted RBP19.92■□□□□ 0.78
COL5A3-202ENST00000461214 PXDNQ92626 1479 aa19.92■□□□□ 0.78
COL5A3-202ENST00000461214 PHF8Q9UPP1 1060 aa19.91■□□□□ 0.78
COL5A3-202ENST00000461214 NPHP3Q7Z494 1330 aa19.91■□□□□ 0.78
COL5A3-202ENST00000461214 USP6P35125 1406 aa19.91■□□□□ 0.78
COL5A3-202ENST00000461214 FOXO3O43524 673 aa19.9■□□□□ 0.78
COL5A3-202ENST00000461214 CCDC9Q9Y3X0 531 aaKnown RBP19.9■□□□□ 0.78
COL5A3-202ENST00000461214 EDC4Q6P2E9 1401 aaKnown RBP19.9■□□□□ 0.78
COL5A3-202ENST00000461214 PLEKHG5O94827 1062 aa19.89■□□□□ 0.77
COL5A3-202ENST00000461214 POLR3GLQ9BT43 218 aa19.89■□□□□ 0.77
COL5A3-202ENST00000461214 TERF2IPQ9NYB0 399 aa19.89■□□□□ 0.77
COL5A3-202ENST00000461214 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.88■□□□□ 0.77
COL5A3-202ENST00000461214 A0A0G2JS52 829 aa19.88■□□□□ 0.77
COL5A3-202ENST00000461214 BAG6P46379 1132 aa19.88■□□□□ 0.77
COL5A3-202ENST00000461214 MYT1Q01538 1121 aa19.88■□□□□ 0.77
COL5A3-202ENST00000461214 TMC1Q8TDI8 760 aa19.88■□□□□ 0.77
COL5A3-202ENST00000461214 CABP1Q9NZU7 370 aa19.88■□□□□ 0.77
COL5A3-202ENST00000461214 PHRF1Q9P1Y6 1649 aaKnown RBP19.87■□□□□ 0.77
COL5A3-202ENST00000461214 KRT27Q7Z3Y8 459 aa19.87■□□□□ 0.77
COL5A3-202ENST00000461214 KTN1Q86UP2 1357 aaKnown RBP19.86■□□□□ 0.77
COL5A3-202ENST00000461214 ACEP12821 1306 aa19.86■□□□□ 0.77
COL5A3-202ENST00000461214 YY1P25490 414 aa19.86■□□□□ 0.77
COL5A3-202ENST00000461214 HDGFL2Q7Z4V5 671 aaPredicted RBP19.86■□□□□ 0.77
COL5A3-202ENST00000461214 SSH2Q76I76 1423 aa19.85■□□□□ 0.77
COL5A3-202ENST00000461214 R3HDM1Q15032 1099 aaKnown RBP19.85■□□□□ 0.77
COL5A3-202ENST00000461214 ZNF692Q9BU19 519 aaPredicted RBP19.85■□□□□ 0.77
COL5A3-202ENST00000461214 SLC12A5Q9H2X9 1139 aa19.85■□□□□ 0.77
COL5A3-202ENST00000461214 SLIT2O94813 1529 aa19.85■□□□□ 0.77
COL5A3-202ENST00000461214 HAP1P54257 671 aaPredicted RBP19.84■□□□□ 0.77
COL5A3-202ENST00000461214 NGDNQ8NEJ9 315 aaKnown RBP19.84■□□□□ 0.77
COL5A3-202ENST00000461214 NSD3Q9BZ95 1437 aa19.84■□□□□ 0.77
COL5A3-202ENST00000461214 PMFBP1Q8TBY8 1022 aa19.83■□□□□ 0.77
COL5A3-202ENST00000461214 EN1Q05925 392 aaPredicted RBP19.82■□□□□ 0.76
COL5A3-202ENST00000461214 TNS3Q68CZ2 1445 aa19.82■□□□□ 0.76
COL5A3-202ENST00000461214 LTN1O94822 1766 aa19.82■□□□□ 0.76
COL5A3-202ENST00000461214 SBNO1A3KN83 1393 aa19.82■□□□□ 0.76
COL5A3-202ENST00000461214 TTC21AQ8NDW8 1320 aa19.8■□□□□ 0.76
COL5A3-202ENST00000461214 VPS72Q15906 364 aa19.8■□□□□ 0.76
COL5A3-202ENST00000461214 NSD2O96028 1365 aa19.8■□□□□ 0.76
COL5A3-202ENST00000461214 MAP2P11137 1827 aaKnown RBP19.79■□□□□ 0.76
COL5A3-202ENST00000461214 PANK3Q9H999 370 aa19.78■□□□□ 0.76
COL5A3-202ENST00000461214 PSME1Q06323 249 aa19.77■□□□□ 0.76
COL5A3-202ENST00000461214 CABLES1Q8TDN4 633 aa19.77■□□□□ 0.76
COL5A3-202ENST00000461214 NPC1L1Q9UHC9 1359 aa19.77■□□□□ 0.76
COL5A3-202ENST00000461214 SPATA31A3Q5VYP0 1347 aa19.76■□□□□ 0.75
COL5A3-202ENST00000461214 SLIT3O75094 1523 aa19.76■□□□□ 0.75
COL5A3-202ENST00000461214 ARHGEF10O15013 1369 aa19.76■□□□□ 0.75
COL5A3-202ENST00000461214 FAM182BQ5T319 152 aa19.76■□□□□ 0.75
COL5A3-202ENST00000461214 OVOS2A0A0J9YW53 1432 aa19.76■□□□□ 0.75
COL5A3-202ENST00000461214 OVOS2Q6IE36 1432 aa19.76■□□□□ 0.75
COL5A3-202ENST00000461214 CGNL1Q0VF96 1302 aa19.76■□□□□ 0.75
COL5A3-202ENST00000461214 ONECUT3O60422 494 aaPredicted RBP19.74■□□□□ 0.75
COL5A3-202ENST00000461214 DDX10Q13206 875 aaKnown RBP19.74■□□□□ 0.75
COL5A3-202ENST00000461214 FAM98CQ17RN3 349 aaKnown RBP19.74■□□□□ 0.75
COL5A3-202ENST00000461214 KRT28Q7Z3Y7 464 aa19.74■□□□□ 0.75
COL5A3-202ENST00000461214 CARD14Q9BXL6 1004 aa19.74■□□□□ 0.75
COL5A3-202ENST00000461214 TTC21BQ7Z4L5 1316 aa19.74■□□□□ 0.75
COL5A3-202ENST00000461214 PER1O15534 1290 aaPredicted RBP19.73■□□□□ 0.75
COL5A3-202ENST00000461214 LMOD2Q6P5Q4 547 aa19.73■□□□□ 0.75
COL5A3-202ENST00000461214 USP31Q70CQ4 1352 aa19.72■□□□□ 0.75
COL5A3-202ENST00000461214 PLCH1Q4KWH8 1693 aa19.72■□□□□ 0.75
COL5A3-202ENST00000461214 KNSTRNQ9Y448 316 aa19.72■□□□□ 0.75
COL5A3-202ENST00000461214 EZH2Q15910 746 aaKnown RBP19.71■□□□□ 0.75
COL5A3-202ENST00000461214 NFAT5O94916 1531 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms